FFCP PHASE1:Hg19::chr6:409027..409044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:409027..409044,+ | |||
|coexpression_cluster_id=C4601 | |||
|description=CAGE_peak_at_chr6:409027..409044,+ | |description=CAGE_peak_at_chr6:409027..409044,+ | ||
|id=chr6:409027..409044,+ | |id=chr6:409027..409044,+ | ||
|ontology_enrichment_celltype=CL:0000542!2.24e-33!53;CL:0000051!2.24e-33!53;CL:0000945!4.31e-33!24;CL:0000826!4.31e-33!24;CL:0000838!2.39e-31!52;CL:0000738!2.28e-26!140;CL:0002087!9.80e-23!119;CL:0000988!2.67e-21!182;CL:0002031!5.18e-20!124;CL:0000037!2.53e-19!172;CL:0000566!2.53e-19!172;CL:0002032!3.30e-18!165;CL:0000837!3.30e-18!165;CL:0000451!4.54e-16!10;CL:0000990!2.60e-15!8;CL:0000236!1.13e-14!14;CL:0000453!9.63e-10!5;CL:0000817!4.58e-09!3;CL:0000840!5.32e-08!5;CL:0001029!5.32e-08!5;CL:0000080!8.16e-08!6 | |ontology_enrichment_celltype=CL:0000542!2.24e-33!53;CL:0000051!2.24e-33!53;CL:0000945!4.31e-33!24;CL:0000826!4.31e-33!24;CL:0000838!2.39e-31!52;CL:0000738!2.28e-26!140;CL:0002087!9.80e-23!119;CL:0000988!2.67e-21!182;CL:0002031!5.18e-20!124;CL:0000037!2.53e-19!172;CL:0000566!2.53e-19!172;CL:0002032!3.30e-18!165;CL:0000837!3.30e-18!165;CL:0000451!4.54e-16!10;CL:0000990!2.60e-15!8;CL:0000236!1.13e-14!14;CL:0000453!9.63e-10!5;CL:0000817!4.58e-09!3;CL:0000840!5.32e-08!5;CL:0001029!5.32e-08!5;CL:0000080!8.16e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000451;1.23e-19;10!CL:0000784;6.93e-19;3!CL:0000990;5.64e-14;8!CL:0000453;1.58e-11;5!CL:0000542;3.96e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,1.32e-19,10;CL:0000784,8.69e-19,3;CL:0000990,5.40e-14,8;CL:0000542,8.51e-12,53;CL:0000051,8.51e-12,53;CL:0000453,1.50e-11,5;CL:0000988,3.96e-11,177;CL:0000738,1.73e-10,136;CL:0000838,6.18e-09,52;CL:0000037,3.03e-08,168;CL:0002032,4.38e-07,161;CL:0000837,4.38e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;3.96e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.41e-17!10 | |ontology_enrichment_disease=DOID:0060058!5.41e-17!10 | ||
|ontology_enrichment_disease_v019=DOID:4960;5.41e-15;1!DOID:0070004;5.41e-15;1!DOID:630;6.21e-15;1!DOID:0050177;6.21e-15;1!DOID:0050427;6.21e-15;1!DOID:12603;1.50e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.42e-15,1;DOID:0070004,5.42e-15,1;DOID:630,6.22e-15,1;DOID:0050177,6.22e-15,1;DOID:0050427,6.22e-15,1;DOID:12603,9.36e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.04e-08!15;UBERON:0000179!3.04e-08!15;UBERON:0000463!3.04e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!3.04e-08!15;UBERON:0000179!3.04e-08!15;UBERON:0000463!3.04e-08!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr6:409027..409044,+ | |short_description=p@chr6:409027..409044,+ | ||
}} | }} |
Latest revision as of 01:29, 31 July 2015
Short description: | p@chr6:409027..409044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:409027..409044, + |
Coexpression cluster: | C4601_Dendritic_myeloma_lymphangiectasia_xeroderma_adult_hairy_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 1.32e-19 | 10 |
plasmacytoid dendritic cell | 8.69e-19 | 3 |
conventional dendritic cell | 5.40e-14 | 8 |
lymphocyte | 8.51e-12 | 53 |
common lymphoid progenitor | 8.51e-12 | 53 |
Langerhans cell | 1.50e-11 | 5 |
hematopoietic cell | 3.96e-11 | 177 |
leukocyte | 1.73e-10 | 136 |
lymphoid lineage restricted progenitor cell | 6.18e-09 | 52 |
hematopoietic stem cell | 3.03e-08 | 168 |
hematopoietic oligopotent progenitor cell | 4.38e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.38e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.42e-15 | 1 |
myeloma | 5.42e-15 | 1 |
genetic disease | 6.22e-15 | 1 |
monogenic disease | 6.22e-15 | 1 |
xeroderma pigmentosum | 6.22e-15 | 1 |
acute leukemia | 9.36e-15 | 1 |