FFCP PHASE1:Hg19::chr6:37142064..37142089,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:37142064..37142089,+ | |||
|coexpression_cluster_id=C2858 | |||
|description=CAGE_peak_at_chr6:37142064..37142089,+ | |description=CAGE_peak_at_chr6:37142064..37142089,+ | ||
|id=chr6:37142064..37142089,+ | |id=chr6:37142064..37142089,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.35e-17!42;CL:0000860!9.08e-16!45;CL:0002032!1.29e-13!165;CL:0000837!1.29e-13!165;CL:0000037!1.39e-13!172;CL:0000566!1.39e-13!172;CL:0000763!2.11e-13!112;CL:0000049!2.11e-13!112;CL:0000988!3.69e-13!182;CL:0000766!9.01e-12!76;CL:0000738!1.02e-10!140;CL:0000839!1.50e-10!70;CL:0002031!1.29e-09!124;CL:0002087!1.51e-09!119;CL:0002194!3.09e-09!63;CL:0000576!3.09e-09!63;CL:0000040!3.09e-09!63;CL:0000559!3.09e-09!63;CL:0002009!1.92e-08!65;CL:0000557!2.11e-08!71 | |ontology_enrichment_celltype=CL:0002057!1.35e-17!42;CL:0000860!9.08e-16!45;CL:0002032!1.29e-13!165;CL:0000837!1.29e-13!165;CL:0000037!1.39e-13!172;CL:0000566!1.39e-13!172;CL:0000763!2.11e-13!112;CL:0000049!2.11e-13!112;CL:0000988!3.69e-13!182;CL:0000766!9.01e-12!76;CL:0000738!1.02e-10!140;CL:0000839!1.50e-10!70;CL:0002031!1.29e-09!124;CL:0002087!1.51e-09!119;CL:0002194!3.09e-09!63;CL:0000576!3.09e-09!63;CL:0000040!3.09e-09!63;CL:0000559!3.09e-09!63;CL:0002009!1.92e-08!65;CL:0000557!2.11e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.44e-25;33!CL:0002057;3.44e-25;33!CL:0000473;8.81e-21;39!CL:0000234;8.81e-21;39!CL:0000576;1.64e-14;48!CL:0000766;6.47e-10;69!CL:0000763;1.56e-08;100!CL:0002541;5.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.53e-27,42;CL:0002057,9.53e-27,42;CL:0000473,2.13e-24,48;CL:0000234,2.13e-24,48;CL:0000763,7.80e-22,108;CL:0000049,7.80e-22,108;CL:0000839,1.14e-18,66;CL:0002194,4.82e-18,59;CL:0000576,4.82e-18,59;CL:0000040,4.82e-18,59;CL:0000559,4.82e-18,59;CL:0000766,8.17e-18,72;CL:0002032,8.89e-18,161;CL:0000837,8.89e-18,161;CL:0002009,3.15e-17,61;CL:0000037,1.58e-16,168;CL:0000557,4.43e-15,67;CL:0000988,4.51e-15,177;CL:0002031,4.08e-13,120;CL:0002087,7.04e-12,115;CL:0000738,2.55e-11,136;CL:0002541,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.24e-22;42!CL:0000049;7.27e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.12e-11!102;UBERON:0003061!2.12e-11!102;UBERON:0002193!2.19e-09!112;UBERON:0000178!2.77e-07!15;UBERON:0000179!2.77e-07!15;UBERON:0000463!2.77e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.23e-08;15!UBERON:0000179;1.23e-08;15!UBERON:0000463;1.23e-08;15!UBERON:0003124;5.05e-07;3!UBERON:0000920;5.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.40e-17,98;UBERON:0003061,4.40e-17,98;UBERON:0002193,1.14e-14,108;UBERON:0002371,1.65e-12,76;UBERON:0001474,4.07e-11,82;UBERON:0004765,1.45e-09,90;UBERON:0002405,4.69e-09,93;UBERON:0000178,5.04e-09,15;UBERON:0000179,5.04e-09,15;UBERON:0000463,5.04e-09,15;UBERON:0001434,5.39e-08,100;UBERON:0000920,3.35e-07,3 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,1.0007329835313,0,0,2.53299878168311,0,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0,0.786728553697808,0.767658796194425,0.619264493264304,0,0,0,0.309868802321207,0.426507697462265,0,0.553995408531877,1.20326668482085,1.30206522429511,0,0.32389366601898,0,0.872389432677388,0.377875943688809,0.485168122375632,1.39457422143411,1.23350366406548,1.23882548358041,4.02769349251011,4.86705342405291,5.91205574721463,1.37898272294647,1.29096936716765,1.35426486594342,2.07066573496865,1.36453075028923,1.12361742222542,0.918251677112708,1.60464513538047,1.27867425159808,4.28806690242731,6.98122801675712,5.96714650745772,1.16083695451434,0,1.24564449799115,5.52747063564835,1.0429658368404,4.34377689410233,0,0.368277635987565,0.632924774881769,0.633765858935825,1.27562579979026,0.419317291016752,0.336985893439485,0.750884464207532,0.16072558669708,0,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0.196709770113833,1.96505381374582,0.411202997999018,8.3593247695339,0.651844533267181,0.946895611469467,0,5.23629147360316,1.17842362989935,0.443067789167242,2.43723477388514,5.63601806792971,4.03183977435623,2.13769275984779,4.42160028457357,4.05724320029073,1.63115219478266,0.802622484269139,1.04535523804977,4.53237370790265,0.766440987203842,1.03088233644789,0.506039384039006,0.637130828648193,0,0.950452044448374,0.752875595388864,0.127986611154418,0,0.473554504088034,0,1.41124720257313,4.01160293675261,0.579297615531196,0,0.670700859703636,0,0.722878304769133,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0.130979075497713,0,0.741568885568859,0,0,0.132957960518865,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0.759783069987479,0,0,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0,0,0.280901613404497,0,0,0,2.37600571456411,0.494533858557114,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0.67824236924195,0.57978255948989,0.545492241181669,0.286804595389004,0.731842236777572,0.397589304964456,0.580969714347592,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0,0.185176890317059,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0.352193736052904,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.387815147273333,3.57656445851882,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,1.00451418286425,0,0,0,0,0,0,0,0.224170287987055,0,1.07813787429759,0.513372145118994,0.254094624222463,0,0,0,0,1.49801404789436,5.9832291840805,0.414415513436035,0,0,0,0.415941723061614,0.356857977594324,0,0,0.902838299183157,0,0,0.664225598535437,0,0,0.195801157462741,0,0.413536052245775,0.431428401637234,0.320182673410333,0.909382714338778,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0,0.362578348774867,0.200506470303285,0.736647911487171,0.918515585316854,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,3.94667777962682,5.75157992254781,0.256450125116389,0,0,0.721287081534056,0,0,0,0,0,0,0,0.460511024178389,0,0.429680979473094,0.145016693914229,0,1.33548053470106,0.495854746082934,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,1.55545975149084,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,0.0962221127255121,0,1.08890984861323,0.470719003883896,0.43050537267123,1.68471475667626,0,0.229723400206959,1.52234282769651,1.52927441428475,3.98753031021914,0.476463550915578,1.64544909234478,1.94541993357815,2.70015718619057,4.75875105776562,0.213648142254946,0,0.490080431962063,0.185803175125719,0,0.142283686696828,0,1.39705560002972,1.7235483311913,1.05836791361941,0,0.842391534340376,0,0,0,1.18504244461122,1.92705690124439,1.00899853595524,0,0,0,0,0,0.19538809540204,0,0,1.6227340708559,0.33307196799782,0,0,0.146508179271894,0.242721043499027,0,0,1.67121139316383,0.296964680832639,0,0,0,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0,0.295930216910801,4.7896618469388,0,0,0,0,0,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|phase1_expression=0.54503513781167,0.214100523890983,0,1.0007329835313,0,0,2.53299878168311,0,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0,0.786728553697808,0.767658796194425,0.619264493264304,0,0,0,0.309868802321207,0.426507697462265,0,0.553995408531877,1.20326668482085,1.30206522429511,0,0.32389366601898,0,0.872389432677388,0.377875943688809,0.485168122375632,1.39457422143411,1.23350366406548,1.23882548358041,4.02769349251011,4.86705342405291,5.91205574721463,1.37898272294647,1.29096936716765,1.35426486594342,2.07066573496865,1.36453075028923,1.12361742222542,0.918251677112708,1.60464513538047,1.27867425159808,4.28806690242731,6.98122801675712,5.96714650745772,1.16083695451434,0,1.24564449799115,5.52747063564835,1.0429658368404,4.34377689410233,0,0.368277635987565,0.632924774881769,0.633765858935825,1.27562579979026,0.419317291016752,0.336985893439485,0.750884464207532,0.16072558669708,0,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0.196709770113833,1.96505381374582,0.411202997999018,8.3593247695339,0.651844533267181,0.946895611469467,0,5.23629147360316,1.17842362989935,0.443067789167242,2.43723477388514,5.63601806792971,4.03183977435623,2.13769275984779,4.42160028457357,4.05724320029073,1.63115219478266,0.802622484269139,1.04535523804977,4.53237370790265,0.766440987203842,1.03088233644789,0.506039384039006,0.637130828648193,0,0.950452044448374,0.752875595388864,0.127986611154418,0,0.473554504088034,0,1.41124720257313,4.01160293675261,0.579297615531196,0,0.670700859703636,0,0.722878304769133,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0.130979075497713,0,0.741568885568859,0,0,0.132957960518865,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0.759783069987479,0,0,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0,0,0.280901613404497,0,0,0,2.37600571456411,0.494533858557114,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0.67824236924195,0.57978255948989,0.545492241181669,0.286804595389004,0.731842236777572,0.397589304964456,0.580969714347592,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0,0.185176890317059,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0.352193736052904,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.387815147273333,3.57656445851882,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,1.00451418286425,0,0,0,0,0,0,0,0.224170287987055,0,1.07813787429759,0.513372145118994,0.254094624222463,0,0,0,0,1.49801404789436,5.9832291840805,0.414415513436035,0,0,0,0.415941723061614,0.356857977594324,0,0,0.902838299183157,0,0,0.664225598535437,0,0,0.195801157462741,0,0.413536052245775,0.431428401637234,0.320182673410333,0.909382714338778,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0.0821271560138091,0,0,0.362578348774867,0.200506470303285,0.736647911487171,0.918515585316854,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,3.94667777962682,5.75157992254781,0.256450125116389,0,0,0.721287081534056,0,0,0,0,0,0,0,0.460511024178389,0,0.429680979473094,0.145016693914229,0,1.33548053470106,0.495854746082934,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,1.55545975149084,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,0.0962221127255121,0,1.08890984861323,0.470719003883896,0.43050537267123,1.68471475667626,0,0.229723400206959,1.52234282769651,1.52927441428475,3.98753031021914,0.476463550915578,1.64544909234478,1.94541993357815,2.70015718619057,4.75875105776562,0.213648142254946,0,0.490080431962063,0.185803175125719,0,0.142283686696828,0,1.39705560002972,1.7235483311913,1.05836791361941,0,0.842391534340376,0,0,0,1.18504244461122,1.92705690124439,1.00899853595524,0,0,0,0,0,0.19538809540204,0,0,1.6227340708559,0.33307196799782,0,0,0.146508179271894,0.242721043499027,0,0,1.67121139316383,0.296964680832639,0,0,0,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0,0.295930216910801,4.7896618469388,0,0,0,0,0,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| ||
|short_description=p@chr6:37142064..37142089,+ | |short_description=p@chr6:37142064..37142089,+ | ||
}} | }} |
Latest revision as of 01:16, 31 July 2015
Short description: | p@chr6:37142064..37142089, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:37142064..37142089, + |
Coexpression cluster: | C2858_Whole_blood_CD14_Cardiac_Reticulocytes_leukemia_diffuse |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.53e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.53e-27 | 42 |
defensive cell | 2.13e-24 | 48 |
phagocyte | 2.13e-24 | 48 |
myeloid cell | 7.80e-22 | 108 |
common myeloid progenitor | 7.80e-22 | 108 |
myeloid lineage restricted progenitor cell | 1.14e-18 | 66 |
monopoietic cell | 4.82e-18 | 59 |
monocyte | 4.82e-18 | 59 |
monoblast | 4.82e-18 | 59 |
promonocyte | 4.82e-18 | 59 |
myeloid leukocyte | 8.17e-18 | 72 |
hematopoietic oligopotent progenitor cell | 8.89e-18 | 161 |
hematopoietic multipotent progenitor cell | 8.89e-18 | 161 |
macrophage dendritic cell progenitor | 3.15e-17 | 61 |
hematopoietic stem cell | 1.58e-16 | 168 |
granulocyte monocyte progenitor cell | 4.43e-15 | 67 |
hematopoietic cell | 4.51e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 4.08e-13 | 120 |
nongranular leukocyte | 7.04e-12 | 115 |
leukocyte | 2.55e-11 | 136 |
chorionic membrane mesenchymal stem cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.40e-17 | 98 |
blood island | 4.40e-17 | 98 |
hemolymphoid system | 1.14e-14 | 108 |
bone marrow | 1.65e-12 | 76 |
bone element | 4.07e-11 | 82 |
skeletal element | 1.45e-09 | 90 |
immune system | 4.69e-09 | 93 |
blood | 5.04e-09 | 15 |
haemolymphatic fluid | 5.04e-09 | 15 |
organism substance | 5.04e-09 | 15 |
skeletal system | 5.39e-08 | 100 |
egg chorion | 3.35e-07 | 3 |