FFCP PHASE1:Hg19::chr6:36992669..36992691,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:36992669..36992691,+ | |||
|coexpression_cluster_id=C120 | |coexpression_cluster_id=C120 | ||
|description=CAGE_peak_at_chr6:36992669..36992691,+ | |description=CAGE_peak_at_chr6:36992669..36992691,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002368!1.66e-12!13;CL:0000860!1.89e-12!45;CL:0002076!3.38e-11!43;CL:0002009!3.00e-10!65;CL:0002057!5.64e-10!42;CL:0000557!4.36e-09!71;CL:0001014!7.38e-09!2;CL:0001016!7.38e-09!2;CL:0002194!8.04e-08!63;CL:0000576!8.04e-08!63;CL:0000040!8.04e-08!63;CL:0000559!8.04e-08!63;CL:0002031!1.27e-07!124;CL:0000223!2.14e-07!59;CL:0000839!9.33e-07!70 | |ontology_enrichment_celltype=CL:0002368!1.66e-12!13;CL:0000860!1.89e-12!45;CL:0002076!3.38e-11!43;CL:0002009!3.00e-10!65;CL:0002057!5.64e-10!42;CL:0000557!4.36e-09!71;CL:0001014!7.38e-09!2;CL:0001016!7.38e-09!2;CL:0002194!8.04e-08!63;CL:0000576!8.04e-08!63;CL:0000040!8.04e-08!63;CL:0000559!8.04e-08!63;CL:0002031!1.27e-07!124;CL:0000223!2.14e-07!59;CL:0000839!9.33e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.15e-15;2!CL:0001016;1.15e-15;2!CL:0002202;1.58e-13;9!CL:0002632;1.58e-13;9!CL:0000322;9.90e-11;3!CL:0000307;9.90e-11;3!CL:0002368;1.13e-09;13!CL:0000453;4.79e-07;5 | |ontology_enrichment_celltype_v019=CL:0001014;1.15e-15;2!CL:0001016;1.15e-15;2!CL:0002202;1.58e-13;9!CL:0002632;1.58e-13;9!CL:0000322;9.90e-11;3!CL:0000307;9.90e-11;3!CL:0002368;1.13e-09;13!CL:0000453;4.79e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.15e-15,2;CL:0001016,1.15e-15,2;CL:0002202,1.80e-13,9;CL:0002632,1.80e-13,9;CL:0000068,9.90e-11,3;CL:0000069,9.90e-11,3;CL:0000307,9.90e-11,3;CL:0000377,9.90e-11,3;CL:0000322,1.20e-10,3;CL:0002368,1.24e-09,13;CL:0000453,4.79e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;9.90e-11;3 | |ontology_enrichment_development_v019=CL:0000377;9.90e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;2.05e-15;2!DOID:3908;6.04e-07;5 | |ontology_enrichment_disease_v019=DOID:3910;2.05e-15;2!DOID:3908;6.04e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,2.74e-15,2;DOID:3908,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.12e-07!80;UBERON:0001474!6.61e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!1.12e-07!80;UBERON:0001474!6.61e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.05e-15;2!UBERON:0002173;2.05e-15;2!UBERON:0002186;2.05e-15;2!UBERON:0004821;9.90e-11;3!UBERON:0007499;9.90e-11;3!UBERON:0003215;9.90e-11;3!UBERON:0010368;9.90e-11;3!UBERON:0009911;9.90e-11;3!UBERON:0002299;9.90e-11;3!UBERON:0006524;9.90e-11;3!UBERON:0008874;9.90e-11;3!UBERON:0002169;9.90e-11;3!UBERON:0004894;9.90e-11;3!UBERON:0007196;1.65e-08;15!UBERON:0001558;1.65e-08;15!UBERON:0009856;2.26e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;2.05e-15;2!UBERON:0002173;2.05e-15;2!UBERON:0002186;2.05e-15;2!UBERON:0004821;9.90e-11;3!UBERON:0007499;9.90e-11;3!UBERON:0003215;9.90e-11;3!UBERON:0010368;9.90e-11;3!UBERON:0009911;9.90e-11;3!UBERON:0002299;9.90e-11;3!UBERON:0006524;9.90e-11;3!UBERON:0008874;9.90e-11;3!UBERON:0002169;9.90e-11;3!UBERON:0004894;9.90e-11;3!UBERON:0007196;1.65e-08;15!UBERON:0001558;1.65e-08;15!UBERON:0009856;2.26e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.74e-15,2;UBERON:0002173,2.74e-15,2;UBERON:0002186,2.74e-15,2;UBERON:0004821,1.20e-10,3;UBERON:0003215,1.20e-10,3;UBERON:0010368,1.20e-10,3;UBERON:0009911,1.20e-10,3;UBERON:0002299,1.20e-10,3;UBERON:0006524,1.20e-10,3;UBERON:0008874,1.20e-10,3;UBERON:0002169,1.20e-10,3;UBERON:0004894,1.20e-10,3;UBERON:0007196,1.78e-08,15;UBERON:0001558,1.78e-08,15 | |||
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| ||
|short_description=p@chr6:36992669..36992691,+ | |short_description=p@chr6:36992669..36992691,+ | ||
}} | }} |
Latest revision as of 01:15, 31 July 2015
Short description: | p@chr6:36992669..36992691, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:36992669..36992691, + |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.15e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.15e-15 | 2 |
epithelial cell of tracheobronchial tree | 1.80e-13 | 9 |
epithelial cell of lower respiratory tract | 1.80e-13 | 9 |
duct epithelial cell | 9.90e-11 | 3 |
branched duct epithelial cell | 9.90e-11 | 3 |
tracheal epithelial cell | 9.90e-11 | 3 |
tracheoblast | 9.90e-11 | 3 |
pneumocyte | 1.20e-10 | 3 |
respiratory epithelial cell | 1.24e-09 | 13 |
Langerhans cell | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.74e-15 | 2 |
alveolar duct | 2.74e-15 | 2 |
bronchiole | 2.74e-15 | 2 |
pulmonary alveolus epithelium | 1.20e-10 | 3 |
alveolus | 1.20e-10 | 3 |
pulmonary lobule | 1.20e-10 | 3 |
lobule | 1.20e-10 | 3 |
alveolus of lung | 1.20e-10 | 3 |
alveolar system | 1.20e-10 | 3 |
pulmonary acinus | 1.20e-10 | 3 |
alveolar sac | 1.20e-10 | 3 |
alveolar wall | 1.20e-10 | 3 |
tracheobronchial tree | 1.78e-08 | 15 |
lower respiratory tract | 1.78e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.74e-15 | 2 |
non-small cell lung carcinoma | 6.77e-07 | 5 |