FFCP PHASE1:Hg19::chr6:35511496..35511503,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:35511496..35511503,+ | |||
|coexpression_cluster_id=C1937 | |coexpression_cluster_id=C1937 | ||
|description=CAGE_peak_at_chr6:35511496..35511503,+ | |description=CAGE_peak_at_chr6:35511496..35511503,+ | ||
|id=chr6:35511496..35511503,+ | |id=chr6:35511496..35511503,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.79e-20!7;CL:0000586!2.79e-20!7 | |ontology_enrichment_celltype=CL:0000039!2.79e-20!7;CL:0000586!2.79e-20!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.15e-112;7!CL:0000586;3.15e-112;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.15e-112,7;CL:0000586,3.15e-112,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.44e-21;10!UBERON:0005564;9.44e-21;10 | |||
|ontology_enrichment_disease=DOID:3095!4.12e-10!22;DOID:2994!4.12e-10!22 | |ontology_enrichment_disease=DOID:3095!4.12e-10!22;DOID:2994!4.12e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.49e-36;22!DOID:2994;1.49e-36;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.49e-36,22;DOID:2994,1.49e-36,22 | |||
|ontology_enrichment_uberon=UBERON:0002046!6.32e-13!5;UBERON:0004117!6.32e-13!5;UBERON:0007689!6.32e-13!5;UBERON:0007123!6.32e-13!5;UBERON:0003091!6.32e-13!5;UBERON:0009722!6.13e-12!11;UBERON:0007690!6.13e-12!11;UBERON:0000341!9.44e-09!2;UBERON:0008814!1.43e-08!15;UBERON:0000473!4.29e-08!8 | |ontology_enrichment_uberon=UBERON:0002046!6.32e-13!5;UBERON:0004117!6.32e-13!5;UBERON:0007689!6.32e-13!5;UBERON:0007123!6.32e-13!5;UBERON:0003091!6.32e-13!5;UBERON:0009722!6.13e-12!11;UBERON:0007690!6.13e-12!11;UBERON:0000341!9.44e-09!2;UBERON:0008814!1.43e-08!15;UBERON:0000473!4.29e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.26e-25;8!UBERON:0003135;5.63e-19;11!UBERON:0000991;1.77e-10;21!UBERON:0003101;4.74e-10;22!UBERON:0000079;4.74e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.43e-25,8;UBERON:0003135,6.17e-19,11;UBERON:0000991,1.86e-10,21;UBERON:0009196,1.86e-10,21;UBERON:0009117,1.86e-10,21;UBERON:0005564,1.86e-10,21;UBERON:0004176,4.96e-10,22;UBERON:0003101,4.96e-10,22;UBERON:0000079,4.96e-10,22 | |||
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| ||
|short_description=p@chr6:35511496..35511503,+ | |short_description=p@chr6:35511496..35511503,+ | ||
}} | }} |
Latest revision as of 01:02, 31 July 2015
Short description: | p@chr6:35511496..35511503, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35511496..35511503, + |
Coexpression cluster: | C1937_choriocarcinoma_thyroid_testicular_throat_Alveolar_lung_pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.15e-112 | 7 |
germ cell | 3.15e-112 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.43e-25 | 8 |
male reproductive organ | 6.17e-19 | 11 |
gonad | 1.86e-10 | 21 |
indifferent external genitalia | 1.86e-10 | 21 |
indifferent gonad | 1.86e-10 | 21 |
gonad primordium | 1.86e-10 | 21 |
external genitalia | 4.96e-10 | 22 |
male organism | 4.96e-10 | 22 |
male reproductive system | 4.96e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.49e-36 | 22 |
germ cell cancer | 1.49e-36 | 22 |