FFCP PHASE1:Hg19::chr6:31785614..31785640,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:31785614..31785640,+
|short_description=p@chr6:31785614..31785640,+
|description=CAGE_peak_at_chr6:31785614..31785640,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:31785614..31785640,+ | |||
|coexpression_cluster_id=C4593 | |||
|description=CAGE_peak_at_chr6:31785614..31785640,+ | |||
|id=chr6:31785614..31785640,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.10e-10!45;CL:0002057!3.33e-10!42;CL:0000557!2.98e-09!71;CL:0000839!8.48e-09!70;CL:0000766!3.91e-08!76;CL:0002009!4.28e-08!65;CL:0002194!6.66e-08!63;CL:0000576!6.66e-08!63;CL:0000040!6.66e-08!63;CL:0000559!6.66e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.64e-21;33!CL:0002057;2.64e-21;33!CL:0000473;3.10e-16;39!CL:0000234;3.10e-16;39!CL:0000097;2.33e-10;5!CL:0000576;7.42e-10;48!CL:0000766;6.81e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.85e-17,42;CL:0002057,1.85e-17,42;CL:0000839,7.25e-16,66;CL:0000557,1.40e-15,67;CL:0000473,6.14e-15,48;CL:0000234,6.14e-15,48;CL:0000766,2.84e-14,72;CL:0002194,2.05e-11,59;CL:0000576,2.05e-11,59;CL:0000040,2.05e-11,59;CL:0000559,2.05e-11,59;CL:0002009,5.81e-11,61;CL:0000097,2.45e-10,5;CL:0002028,2.45e-10,5;CL:0000763,1.98e-08,108;CL:0000049,1.98e-08,108;CL:0002031,2.88e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-22!115;UBERON:0001049!7.99e-11!57;UBERON:0005068!7.99e-11!57;UBERON:0006241!7.99e-11!57;UBERON:0007135!7.99e-11!57;UBERON:0005743!4.09e-09!86;UBERON:0001017!8.42e-09!82;UBERON:0000062!1.56e-08!511;UBERON:0003080!2.01e-08!42;UBERON:0002616!2.19e-08!59;UBERON:0002346!2.62e-08!90;UBERON:0000073!7.38e-08!94;UBERON:0001016!7.38e-08!94;UBERON:0003075!7.87e-08!86;UBERON:0007284!7.87e-08!86;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0002371!3.51e-07!80;UBERON:0000955!6.00e-07!69;UBERON:0006238!6.00e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;6.24e-12;2!UBERON:0003978;3.17e-08;3!UBERON:0000946;3.17e-08;3!UBERON:0002134;8.10e-07;1!UBERON:0005208;8.10e-07;1!UBERON:0004145;8.10e-07;1!UBERON:0005946;8.10e-07;1!UBERON:0005965;8.10e-07;1!UBERON:0002078;8.10e-07;1!UBERON:0002135;9.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.38e-13,76;UBERON:0001474,3.92e-12,82;UBERON:0002133,5.94e-12,2;UBERON:0002405,9.36e-12,93;UBERON:0002390,5.63e-11,98;UBERON:0003061,5.63e-11,98;UBERON:0004765,9.17e-11,90;UBERON:0002193,1.23e-09,108;UBERON:0001434,2.32e-09,100;UBERON:0003978,3.07e-08,3;UBERON:0009751,3.07e-08,3;UBERON:0000946,3.07e-08,3;UBERON:0002523,3.07e-08,3;UBERON:0005983,3.07e-08,3;UBERON:0002165,3.07e-08,3;UBERON:0002062,3.07e-08,3;UBERON:0007280,3.07e-08,3;UBERON:0007023,7.54e-07,114;UBERON:0002134,7.90e-07,1;UBERON:0005208,7.90e-07,1;UBERON:0005946,7.90e-07,1;UBERON:0005965,7.90e-07,1;UBERON:0002078,7.90e-07,1;UBERON:0002135,8.81e-07,1;UBERON:0000996,9.81e-07,1 | |||
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| ||
|short_description=p@chr6:31785614..31785640,+ | |||
}} | }} |
Latest revision as of 00:10, 31 July 2015
Short description: | p@chr6:31785614..31785640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31785614..31785640, + |
Coexpression cluster: | C4593_Mast_heart_vagina_aorta_peripheral_substantia_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.85e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.85e-17 | 42 |
myeloid lineage restricted progenitor cell | 7.25e-16 | 66 |
granulocyte monocyte progenitor cell | 1.40e-15 | 67 |
defensive cell | 6.14e-15 | 48 |
phagocyte | 6.14e-15 | 48 |
myeloid leukocyte | 2.84e-14 | 72 |
monopoietic cell | 2.05e-11 | 59 |
monocyte | 2.05e-11 | 59 |
monoblast | 2.05e-11 | 59 |
promonocyte | 2.05e-11 | 59 |
macrophage dendritic cell progenitor | 5.81e-11 | 61 |
mast cell | 2.45e-10 | 5 |
basophil mast progenitor cell | 2.45e-10 | 5 |
myeloid cell | 1.98e-08 | 108 |
common myeloid progenitor | 1.98e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.88e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.38e-13 | 76 |
bone element | 3.92e-12 | 82 |
atrioventricular valve | 5.94e-12 | 2 |
immune system | 9.36e-12 | 93 |
hematopoietic system | 5.63e-11 | 98 |
blood island | 5.63e-11 | 98 |
skeletal element | 9.17e-11 | 90 |
hemolymphoid system | 1.23e-09 | 108 |
skeletal system | 2.32e-09 | 100 |
valve | 3.07e-08 | 3 |
cardiac mesenchyme | 3.07e-08 | 3 |
cardial valve | 3.07e-08 | 3 |
tunica intima | 3.07e-08 | 3 |
heart layer | 3.07e-08 | 3 |
endocardium | 3.07e-08 | 3 |
endocardial cushion | 3.07e-08 | 3 |
presumptive endocardium | 3.07e-08 | 3 |
adult organism | 7.54e-07 | 114 |
tricuspid valve | 7.90e-07 | 1 |
right atrium valve | 7.90e-07 | 1 |
outflow tract of atrium | 7.90e-07 | 1 |
outflow part of right atrium | 7.90e-07 | 1 |
right cardiac atrium | 7.90e-07 | 1 |
mitral valve | 8.81e-07 | 1 |
vagina | 9.81e-07 | 1 |