FFCP PHASE1:Hg19::chr6:31785440..31785544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:31785440..31785544,+ | |||
|coexpression_cluster_id=C366 | |||
|description=CAGE_peak_at_chr6:31785440..31785544,+ | |description=CAGE_peak_at_chr6:31785440..31785544,+ | ||
|id=chr6:31785440..31785544,+ | |id=chr6:31785440..31785544,+ | ||
|ontology_enrichment_celltype=CL:0000557!8.57e-07!71;CL:0002009!9.73e-07!65 | |ontology_enrichment_celltype=CL:0000557!8.57e-07!71;CL:0002009!9.73e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-10;33!CL:0002057;1.05e-10;33!CL:0000473;2.41e-09;39!CL:0000234;2.41e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.74e-07,48;CL:0000234,1.74e-07,48;CL:0000557,2.03e-07,67;CL:0000860,3.55e-07,42;CL:0002057,3.55e-07,42;CL:0002009,7.01e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.03e-19!115;UBERON:0001049!1.19e-15!57;UBERON:0005068!1.19e-15!57;UBERON:0006241!1.19e-15!57;UBERON:0007135!1.19e-15!57;UBERON:0000062!8.07e-14!511;UBERON:0002616!2.73e-12!59;UBERON:0003080!2.85e-11!42;UBERON:0002780!1.09e-10!41;UBERON:0001890!1.09e-10!41;UBERON:0006240!1.09e-10!41;UBERON:0001017!1.02e-09!82;UBERON:0000955!1.26e-09!69;UBERON:0006238!1.26e-09!69;UBERON:0002346!2.95e-09!90;UBERON:0002020!2.99e-09!34;UBERON:0003528!2.99e-09!34;UBERON:0003075!1.52e-08!86;UBERON:0007284!1.52e-08!86;UBERON:0002791!1.72e-08!33;UBERON:0005743!1.79e-08!86;UBERON:0001893!3.90e-08!34;UBERON:0000073!1.55e-07!94;UBERON:0001016!1.55e-07!94;UBERON:0001869!1.99e-07!32;UBERON:0000468!3.45e-07!659;UBERON:0002619!6.37e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!5.03e-19!115;UBERON:0001049!1.19e-15!57;UBERON:0005068!1.19e-15!57;UBERON:0006241!1.19e-15!57;UBERON:0007135!1.19e-15!57;UBERON:0000062!8.07e-14!511;UBERON:0002616!2.73e-12!59;UBERON:0003080!2.85e-11!42;UBERON:0002780!1.09e-10!41;UBERON:0001890!1.09e-10!41;UBERON:0006240!1.09e-10!41;UBERON:0001017!1.02e-09!82;UBERON:0000955!1.26e-09!69;UBERON:0006238!1.26e-09!69;UBERON:0002346!2.95e-09!90;UBERON:0002020!2.99e-09!34;UBERON:0003528!2.99e-09!34;UBERON:0003075!1.52e-08!86;UBERON:0007284!1.52e-08!86;UBERON:0002791!1.72e-08!33;UBERON:0005743!1.79e-08!86;UBERON:0001893!3.90e-08!34;UBERON:0000073!1.55e-07!94;UBERON:0001016!1.55e-07!94;UBERON:0001869!1.99e-07!32;UBERON:0000468!3.45e-07!659;UBERON:0002619!6.37e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.27e-08;41!UBERON:0001890;1.27e-08;41!UBERON:0000073;1.65e-08;53!UBERON:0002616;1.65e-08;53!UBERON:0003528;2.16e-08;34!UBERON:0002020;2.16e-08;34!UBERON:0002791;3.71e-08;32!UBERON:0002619;2.09e-07;22!UBERON:0001869;2.86e-07;32!UBERON:0000922;3.65e-07;49!UBERON:0001893;4.56e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.87e-19,114;UBERON:0001049,3.16e-16,56;UBERON:0005068,3.16e-16,56;UBERON:0006241,3.16e-16,56;UBERON:0007135,3.16e-16,56;UBERON:0000073,1.82e-14,53;UBERON:0002616,1.82e-14,53;UBERON:0002780,1.76e-11,41;UBERON:0001890,1.76e-11,41;UBERON:0003080,1.76e-11,41;UBERON:0006240,1.76e-11,41;UBERON:0011216,8.27e-11,223;UBERON:0002346,9.81e-11,86;UBERON:0001017,2.40e-10,81;UBERON:0000955,2.74e-10,68;UBERON:0006238,2.74e-10,68;UBERON:0003528,3.77e-10,34;UBERON:0002020,3.77e-10,34;UBERON:0003075,5.66e-10,82;UBERON:0007284,5.66e-10,82;UBERON:0001016,5.82e-09,89;UBERON:0002791,6.07e-09,32;UBERON:0001893,1.10e-08,34;UBERON:0001869,8.77e-08,32;UBERON:0002619,2.10e-07,22 | |||
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| ||
|short_description=p@chr6:31785440..31785544,+ | |short_description=p@chr6:31785440..31785544,+ | ||
}} | }} |
Latest revision as of 00:10, 31 July 2015
Short description: | p@chr6:31785440..31785544, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31785440..31785544, + |
Coexpression cluster: | C366_heart_vagina_adipose_diaphragm_left_aorta_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.74e-07 | 48 |
phagocyte | 1.74e-07 | 48 |
granulocyte monocyte progenitor cell | 2.03e-07 | 67 |
classical monocyte | 3.55e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.55e-07 | 42 |
macrophage dendritic cell progenitor | 7.01e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.87e-19 | 114 |
neural tube | 3.16e-16 | 56 |
neural rod | 3.16e-16 | 56 |
future spinal cord | 3.16e-16 | 56 |
neural keel | 3.16e-16 | 56 |
regional part of nervous system | 1.82e-14 | 53 |
regional part of brain | 1.82e-14 | 53 |
regional part of forebrain | 1.76e-11 | 41 |
forebrain | 1.76e-11 | 41 |
anterior neural tube | 1.76e-11 | 41 |
future forebrain | 1.76e-11 | 41 |
organ system subdivision | 8.27e-11 | 223 |
neurectoderm | 9.81e-11 | 86 |
central nervous system | 2.40e-10 | 81 |
brain | 2.74e-10 | 68 |
future brain | 2.74e-10 | 68 |
brain grey matter | 3.77e-10 | 34 |
gray matter | 3.77e-10 | 34 |
neural plate | 5.66e-10 | 82 |
presumptive neural plate | 5.66e-10 | 82 |
nervous system | 5.82e-09 | 89 |
regional part of telencephalon | 6.07e-09 | 32 |
telencephalon | 1.10e-08 | 34 |
cerebral hemisphere | 8.77e-08 | 32 |
regional part of cerebral cortex | 2.10e-07 | 22 |