FFCP PHASE1:Hg19::chr6:29643393..29643442,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:29643393..29643442,- | |||
|coexpression_cluster_id=C528 | |||
|description=CAGE_peak_at_chr6:29643393..29643442,- | |description=CAGE_peak_at_chr6:29643393..29643442,- | ||
|id=chr6:29643393..29643442,- | |id=chr6:29643393..29643442,- | ||
|ontology_enrichment_celltype=CL:0002159!2.08e-19!13;CL:0002621!5.23e-17!3;CL:0002166!7.97e-17!3;CL:0002328!4.41e-16!3;CL:0002541!4.41e-16!3;CL:0000362!5.95e-11!8;CL:0000312!2.53e-10!5;CL:0002202!3.32e-09!9;CL:0002632!3.32e-09!9;CL:0000240!1.14e-08!6;CL:0000311!1.14e-08!6;CL:0000079!1.14e-08!6;CL:0000237!1.14e-08!6;CL:0000036!1.14e-08!6;CL:0000357!1.14e-08!6;CL:0000114!1.14e-08!6;CL:0002076!3.34e-08!43;CL:0000066!6.65e-08!254;CL:0002077!4.74e-07!33;CL:0000039!9.18e-07!7;CL:0000586!9.18e-07!7 | |ontology_enrichment_celltype=CL:0002159!2.08e-19!13;CL:0002621!5.23e-17!3;CL:0002166!7.97e-17!3;CL:0002328!4.41e-16!3;CL:0002541!4.41e-16!3;CL:0000362!5.95e-11!8;CL:0000312!2.53e-10!5;CL:0002202!3.32e-09!9;CL:0002632!3.32e-09!9;CL:0000240!1.14e-08!6;CL:0000311!1.14e-08!6;CL:0000079!1.14e-08!6;CL:0000237!1.14e-08!6;CL:0000036!1.14e-08!6;CL:0000357!1.14e-08!6;CL:0000114!1.14e-08!6;CL:0002076!3.34e-08!43;CL:0000066!6.65e-08!254;CL:0002077!4.74e-07!33;CL:0000039!9.18e-07!7;CL:0000586!9.18e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002159;4.17e-49;14!CL:0002621;8.63e-44;3!CL:0002166;2.95e-43;3!CL:0000312;2.16e-26;5!CL:0000362;1.49e-25;9!CL:0000240;4.06e-22;6!CL:0000311;4.06e-22;6!CL:0000079;4.06e-22;6!CL:0000237;4.06e-22;6!CL:0002077;3.17e-18;34!CL:0000317;2.77e-08;2!CL:1000448;2.77e-08;2!CL:0002308;2.77e-08;2!CL:0002140;2.77e-08;2!CL:0002251;4.29e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,3.74e-49,14;CL:0002621,9.28e-44,3;CL:0002166,2.95e-43,3;CL:0000312,2.16e-26,5;CL:0000362,1.35e-25,9;CL:0000240,4.06e-22,6;CL:0000311,4.06e-22,6;CL:0000079,4.06e-22,6;CL:0000237,4.06e-22,6;CL:0000036,4.06e-22,6;CL:0000357,4.06e-22,6;CL:0000114,4.06e-22,6;CL:0002077,4.78e-20,34;CL:0000221,6.00e-09,72;CL:0000317,2.48e-08,2;CL:1000448,2.48e-08,2;CL:0002308,2.48e-08,2;CL:0002140,2.48e-08,2;CL:0000066,3.60e-08,253;CL:0002251,4.34e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000357;4.06e-22;6!CL:0000114;4.06e-22;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;2.95e-15;1!DOID:3603;2.95e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.66e-15,1;DOID:3603,3.66e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0001949!5.23e-17!3;UBERON:0000476!4.41e-16!3;UBERON:0004815!4.41e-16!3;UBERON:0002031!4.41e-16!3;UBERON:0000920!4.41e-16!3;UBERON:0001708!9.65e-13!4;UBERON:0001704!9.65e-13!4;UBERON:0002185!3.44e-12!4;UBERON:0003124!8.53e-12!7;UBERON:0002090!1.23e-08!6;UBERON:0004807!2.64e-08!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;8.63e-44;3!UBERON:0001708;1.18e-32;4!UBERON:0008895;1.18e-32;4!UBERON:0011159;2.79e-26;5!UBERON:0010371;1.07e-21;31!UBERON:0003929;3.31e-19;7!UBERON:0003350;6.84e-17;8!UBERON:0001828;6.84e-17;8!UBERON:0001003;1.74e-15;15!UBERON:0007376;1.74e-15;15!UBERON:0011137;2.58e-12;11!UBERON:0010323;2.58e-12;11!UBERON:0000344;9.29e-12;20!UBERON:0000486;1.81e-11;12!UBERON:0004807;9.53e-11;22!UBERON:0003729;1.25e-10;13!UBERON:0000075;1.21e-08;16!UBERON:0002419;2.77e-08;2!UBERON:0007771;2.77e-08;2!UBERON:0003297;2.77e-08;2!UBERON:0001821;2.77e-08;2!UBERON:0003487;2.77e-08;2!UBERON:0001820;2.77e-08;2!UBERON:0000161;1.93e-07;19!UBERON:0000166;1.93e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.28e-44,3;UBERON:0001708,1.18e-32,4;UBERON:0008895,1.18e-32,4;UBERON:0011159,2.79e-26,5;UBERON:0010188,5.03e-22,6;UBERON:0002539,5.03e-22,6;UBERON:0008816,5.03e-22,6;UBERON:0003350,7.03e-17,8;UBERON:0001828,7.03e-17,8;UBERON:0001003,1.64e-15,15;UBERON:0007376,1.64e-15,15;UBERON:0007383,1.64e-15,15;UBERON:0003102,1.97e-13,99;UBERON:0010323,2.58e-12,11;UBERON:0000344,9.83e-12,20;UBERON:0003729,1.27e-10,13;UBERON:0011137,8.44e-10,14;UBERON:0000033,5.72e-09,56;UBERON:0000075,1.21e-08,16;UBERON:0004807,1.70e-08,28;UBERON:0002419,2.48e-08,2;UBERON:0007771,2.48e-08,2;UBERON:0003297,2.48e-08,2;UBERON:0001821,2.48e-08,2;UBERON:0003487,2.48e-08,2;UBERON:0001820,2.48e-08,2;UBERON:0005089,2.48e-08,2;UBERON:0005088,2.48e-08,2;UBERON:0000153,4.54e-08,62;UBERON:0007811,4.54e-08,62;UBERON:0010371,5.42e-08,104;UBERON:0008814,9.67e-08,18 | |||
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|short_description=p@chr6:29643393..29643442,- | |short_description=p@chr6:29643393..29643442,- | ||
}} | }} |
Latest revision as of 23:23, 30 July 2015
Short description: | p@chr6:29643393..29643442, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:29643393..29643442, - |
Coexpression cluster: | C528_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_Urothelial_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 3.74e-49 | 14 |
gingival epithelial cell | 9.28e-44 | 3 |
epithelial cell of Malassez | 2.95e-43 | 3 |
keratinocyte | 2.16e-26 | 5 |
epidermal cell | 1.35e-25 | 9 |
stratified squamous epithelial cell | 4.06e-22 | 6 |
keratin accumulating cell | 4.06e-22 | 6 |
stratified epithelial cell | 4.06e-22 | 6 |
keratinizing barrier epithelial cell | 4.06e-22 | 6 |
epithelial fate stem cell | 4.06e-22 | 6 |
stratified epithelial stem cell | 4.06e-22 | 6 |
surface ectodermal cell | 4.06e-22 | 6 |
ecto-epithelial cell | 4.78e-20 | 34 |
ectodermal cell | 6.00e-09 | 72 |
sebum secreting cell | 2.48e-08 | 2 |
epithelial cell of sweat gland | 2.48e-08 | 2 |
epithelial cell of skin gland | 2.48e-08 | 2 |
acinar cell of sebaceous gland | 2.48e-08 | 2 |
epithelial cell | 3.60e-08 | 253 |
epithelial cell of alimentary canal | 4.34e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 9.28e-44 | 3 |
jaw skeleton | 1.18e-32 | 4 |
splanchnocranium | 1.18e-32 | 4 |
primary subdivision of cranial skeletal system | 2.79e-26 | 5 |
protuberance | 5.03e-22 | 6 |
pharyngeal arch | 5.03e-22 | 6 |
embryonic head | 5.03e-22 | 6 |
epithelium of mucosa | 7.03e-17 | 8 |
gingiva | 7.03e-17 | 8 |
skin epidermis | 1.64e-15 | 15 |
outer epithelium | 1.64e-15 | 15 |
enveloping layer of ectoderm | 1.64e-15 | 15 |
surface structure | 1.97e-13 | 99 |
cranial skeletal system | 2.58e-12 | 11 |
mucosa | 9.83e-12 | 20 |
mouth mucosa | 1.27e-10 | 13 |
axial skeletal system | 8.44e-10 | 14 |
head | 5.72e-09 | 56 |
subdivision of skeletal system | 1.21e-08 | 16 |
respiratory system epithelium | 1.70e-08 | 28 |
skin gland | 2.48e-08 | 2 |
epidermis gland | 2.48e-08 | 2 |
gland of integumental system | 2.48e-08 | 2 |
sebaceous gland | 2.48e-08 | 2 |
skin sebaceous gland | 2.48e-08 | 2 |
sweat gland | 2.48e-08 | 2 |
sweat gland placode | 2.48e-08 | 2 |
sebaceous gland placode | 2.48e-08 | 2 |
anterior region of body | 4.54e-08 | 62 |
craniocervical region | 4.54e-08 | 62 |
ecto-epithelium | 5.42e-08 | 104 |
pharyngeal arch system | 9.67e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.66e-15 | 1 |
mucinous cystadenocarcinoma | 3.66e-15 | 1 |