FFCP PHASE1:Hg19::chr6:21664412..21664419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:21664412..21664419,+ | |||
|coexpression_cluster_id=C1975 | |coexpression_cluster_id=C1975 | ||
|description=CAGE_peak_at_chr6:21664412..21664419,+ | |description=CAGE_peak_at_chr6:21664412..21664419,+ | ||
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|ontology_enrichment_celltype=CL:0000540!1.05e-13!6;CL:0000031!1.05e-13!6;CL:0000404!1.05e-13!6;CL:0000047!2.66e-10!8;CL:0005020!2.82e-08!6;CL:0002138!2.82e-08!6;CL:0005022!2.82e-08!6;CL:0002605!3.04e-07!3;CL:0000039!5.05e-07!7;CL:0000586!5.05e-07!7;CL:1001319!9.91e-07!1;CL:1000600!9.91e-07!1 | |ontology_enrichment_celltype=CL:0000540!1.05e-13!6;CL:0000031!1.05e-13!6;CL:0000404!1.05e-13!6;CL:0000047!2.66e-10!8;CL:0005020!2.82e-08!6;CL:0002138!2.82e-08!6;CL:0005022!2.82e-08!6;CL:0002605!3.04e-07!3;CL:0000039!5.05e-07!7;CL:0000586!5.05e-07!7;CL:1001319!9.91e-07!1;CL:1000600!9.91e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:1001319;2.39e-66;1!CL:1000600;2.39e-66;1!CL:0000540;2.45e-12;6!CL:0000404;2.45e-12;6 | |ontology_enrichment_celltype_v019=CL:1001319;2.39e-66;1!CL:1000600;2.39e-66;1!CL:0000540;2.45e-12;6!CL:0000404;2.45e-12;6 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.23e-66,1;CL:1000600,1.23e-66,1;CL:0000540,2.45e-12,6;CL:0000031,2.45e-12,6;CL:0000404,2.45e-12,6;CL:0000047,1.35e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000031;2.45e-12;6 | |ontology_enrichment_development_v019=CL:0000031;2.45e-12;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001255!5.53e-11!2;UBERON:0001556!5.53e-11!2;UBERON:0002465!3.09e-08!10;UBERON:0004645!9.91e-07!1;UBERON:0001256!9.91e-07!1;UBERON:0001259!9.91e-07!1 | |ontology_enrichment_uberon=UBERON:0001255!5.53e-11!2;UBERON:0001556!5.53e-11!2;UBERON:0002465!3.09e-08!10;UBERON:0004645!9.91e-07!1;UBERON:0001256!9.91e-07!1;UBERON:0001259!9.91e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.39e-66;1!UBERON:0001256;2.39e-66;1!UBERON:0001259;2.39e-66;1!UBERON:0001255;5.04e-34;2!UBERON:0001556;5.04e-34;2!UBERON:0002021;1.60e-14;5!UBERON:0000365;1.60e-14;5!UBERON:0005910;2.45e-12;6!UBERON:0003350;1.35e-09;8!UBERON:0000486;7.92e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0004645;2.39e-66;1!UBERON:0001256;2.39e-66;1!UBERON:0001259;2.39e-66;1!UBERON:0001255;5.04e-34;2!UBERON:0001556;5.04e-34;2!UBERON:0002021;1.60e-14;5!UBERON:0000365;1.60e-14;5!UBERON:0005910;2.45e-12;6!UBERON:0003350;1.35e-09;8!UBERON:0000486;7.92e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.23e-66,1;UBERON:0001256,1.23e-66,1;UBERON:0001259,1.23e-66,1;UBERON:0001255,3.61e-34,2;UBERON:0001556,3.61e-34,2;UBERON:0000365,1.40e-14,5;UBERON:0002021,1.83e-14,5;UBERON:0005910,2.19e-12,6;UBERON:0003350,1.24e-09,8 | |||
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|short_description=p@chr6:21664412..21664419,+ | |short_description=p@chr6:21664412..21664419,+ | ||
}} | }} |
Latest revision as of 22:37, 30 July 2015
Short description: | p@chr6:21664412..21664419, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:21664412..21664419, + |
Coexpression cluster: | C1975_transitionalcell_parietal_occipital_duodenum_temporal_small_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.23e-66 | 1 |
lower urinary tract cell | 1.23e-66 | 1 |
neuron | 2.45e-12 | 6 |
neuroblast | 2.45e-12 | 6 |
electrically signaling cell | 2.45e-12 | 6 |
neuronal stem cell | 1.35e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.23e-66 | 1 |
wall of urinary bladder | 1.23e-66 | 1 |
mucosa of urinary bladder | 1.23e-66 | 1 |
urinary bladder | 3.61e-34 | 2 |
lower urinary tract | 3.61e-34 | 2 |
urothelium | 1.40e-14 | 5 |
occipital lobe | 1.83e-14 | 5 |
transitional epithelium | 2.19e-12 | 6 |
epithelium of mucosa | 1.24e-09 | 8 |