FFCP PHASE1:Hg19::chr6:20319928..20319935,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:20319928..20319935,+ | |||
|coexpression_cluster_id=C3940 | |coexpression_cluster_id=C3940 | ||
|description=CAGE_peak_at_chr6:20319928..20319935,+ | |description=CAGE_peak_at_chr6:20319928..20319935,+ | ||
|id=chr6:20319928..20319935,+ | |id=chr6:20319928..20319935,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.74e-87!140;CL:0002087!1.14e-82!119;CL:0002031!1.42e-80!124;CL:0000037!1.45e-80!172;CL:0000566!1.45e-80!172;CL:0000988!1.09e-75!182;CL:0002032!1.11e-74!165;CL:0000837!1.11e-74!165;CL:0002057!1.33e-52!42;CL:0000766!3.10e-50!76;CL:0000860!4.97e-50!45;CL:0000557!6.54e-48!71;CL:0000839!3.60e-47!70;CL:0002194!8.01e-47!63;CL:0000576!8.01e-47!63;CL:0000040!8.01e-47!63;CL:0000559!8.01e-47!63;CL:0002009!1.54e-46!65;CL:0000763!2.37e-41!112;CL:0000049!2.37e-41!112;CL:0000838!5.12e-30!52;CL:0000542!3.46e-29!53;CL:0000051!3.46e-29!53;CL:0000134!5.37e-23!358;CL:0002320!6.74e-22!365;CL:0000791!1.87e-18!18;CL:0000789!1.87e-18!18;CL:0002420!1.87e-18!18;CL:0002419!1.87e-18!18;CL:0000790!1.87e-18!18;CL:0000219!4.61e-18!390;CL:0000084!1.50e-16!25;CL:0000827!1.50e-16!25;CL:0000048!1.40e-13!430;CL:0000723!5.89e-13!436;CL:0000034!1.08e-12!444;CL:0002393!3.19e-12!9;CL:0002397!3.19e-12!9;CL:0000945!3.12e-11!24;CL:0000826!3.12e-11!24;CL:0000625!1.10e-10!11;CL:0000624!2.93e-08!6;CL:0000236!3.48e-07!14 | |ontology_enrichment_celltype=CL:0000738!2.74e-87!140;CL:0002087!1.14e-82!119;CL:0002031!1.42e-80!124;CL:0000037!1.45e-80!172;CL:0000566!1.45e-80!172;CL:0000988!1.09e-75!182;CL:0002032!1.11e-74!165;CL:0000837!1.11e-74!165;CL:0002057!1.33e-52!42;CL:0000766!3.10e-50!76;CL:0000860!4.97e-50!45;CL:0000557!6.54e-48!71;CL:0000839!3.60e-47!70;CL:0002194!8.01e-47!63;CL:0000576!8.01e-47!63;CL:0000040!8.01e-47!63;CL:0000559!8.01e-47!63;CL:0002009!1.54e-46!65;CL:0000763!2.37e-41!112;CL:0000049!2.37e-41!112;CL:0000838!5.12e-30!52;CL:0000542!3.46e-29!53;CL:0000051!3.46e-29!53;CL:0000134!5.37e-23!358;CL:0002320!6.74e-22!365;CL:0000791!1.87e-18!18;CL:0000789!1.87e-18!18;CL:0002420!1.87e-18!18;CL:0002419!1.87e-18!18;CL:0000790!1.87e-18!18;CL:0000219!4.61e-18!390;CL:0000084!1.50e-16!25;CL:0000827!1.50e-16!25;CL:0000048!1.40e-13!430;CL:0000723!5.89e-13!436;CL:0000034!1.08e-12!444;CL:0002393!3.19e-12!9;CL:0002397!3.19e-12!9;CL:0000945!3.12e-11!24;CL:0000826!3.12e-11!24;CL:0000625!1.10e-10!11;CL:0000624!2.93e-08!6;CL:0000236!3.48e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-55;33!CL:0002057;1.03e-55;33!CL:0000473;3.42e-41;39!CL:0000234;3.42e-41;39!CL:0000576;3.17e-39;48!CL:0000766;2.31e-27;69!CL:0002087;3.05e-23;104!CL:0000791;8.83e-20;18!CL:0000789;8.83e-20;18!CL:0002419;8.83e-20;18!CL:0000084;3.27e-15;25!CL:0000738;3.13e-14;136!CL:0002393;3.63e-14;6!CL:0002397;3.63e-14;6!CL:0000763;5.33e-13;100!CL:0000624;3.75e-12;6!CL:0000988;7.19e-11;177!CL:0000542;2.29e-10;53!CL:0000625;1.44e-08;11!CL:0000623;4.33e-08;3!CL:0000767;5.02e-08;3!CL:0000226;5.57e-07;3!CL:0000842;5.57e-07;3!CL:0000219;9.06e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.40e-75,42;CL:0002057,3.40e-75,42;CL:0002087,7.51e-73,115;CL:0000738,8.65e-70,136;CL:0000473,2.08e-67,48;CL:0000234,2.08e-67,48;CL:0002031,3.34e-64,120;CL:0000037,9.55e-60,168;CL:0000988,1.06e-55,177;CL:0002032,1.46e-55,161;CL:0000837,1.46e-55,161;CL:0000766,1.40e-54,72;CL:0002194,5.09e-54,59;CL:0000576,5.09e-54,59;CL:0000040,5.09e-54,59;CL:0000559,5.09e-54,59;CL:0002009,7.43e-52,61;CL:0000839,2.18e-49,66;CL:0000557,1.82e-48,67;CL:0000763,1.03e-36,108;CL:0000049,1.03e-36,108;CL:0000791,9.21e-20,18;CL:0000789,9.21e-20,18;CL:0002420,9.21e-20,18;CL:0002419,9.21e-20,18;CL:0000790,9.21e-20,18;CL:0000134,5.84e-18,354;CL:0002320,3.10e-17,361;CL:0000838,1.26e-16,52;CL:0000542,3.46e-16,53;CL:0000051,3.46e-16,53;CL:0000084,4.13e-15,25;CL:0000827,4.13e-15,25;CL:0002393,4.76e-15,9;CL:0002397,4.76e-15,9;CL:0000219,1.09e-14,386;CL:0000624,4.26e-12,6;CL:0000048,1.31e-11,427;CL:0000034,3.18e-11,441;CL:0000723,3.45e-11,433;CL:0000625,1.42e-08,11;CL:0000623,4.71e-08,3;CL:0000825,4.71e-08,3;CL:0000767,5.16e-08,3;CL:0000226,4.34e-07,3;CL:0000842,4.34e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.10e-55;42!CL:0000790;8.83e-20;18!CL:0000051;2.29e-10;53!CL:0000049;4.26e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.36e-52!102;UBERON:0003061!7.36e-52!102;UBERON:0002193!2.64e-46!112;UBERON:0002371!1.16e-43!80;UBERON:0001474!3.32e-39!86;UBERON:0002405!3.66e-33!115;UBERON:0004765!1.45e-31!101;UBERON:0001434!1.45e-31!101;UBERON:0002384!2.09e-20!375;UBERON:0003081!3.02e-14!216;UBERON:0002204!7.39e-12!167;UBERON:0004177!5.51e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!7.36e-52!102;UBERON:0003061!7.36e-52!102;UBERON:0002193!2.64e-46!112;UBERON:0002371!1.16e-43!80;UBERON:0001474!3.32e-39!86;UBERON:0002405!3.66e-33!115;UBERON:0004765!1.45e-31!101;UBERON:0001434!1.45e-31!101;UBERON:0002384!2.09e-20!375;UBERON:0003081!3.02e-14!216;UBERON:0002204!7.39e-12!167;UBERON:0004177!5.51e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.63e-43,76;UBERON:0002390,9.18e-40,98;UBERON:0003061,9.18e-40,98;UBERON:0001474,3.27e-39,82;UBERON:0002405,1.12e-36,93;UBERON:0002193,8.61e-35,108;UBERON:0004765,1.33e-34,90;UBERON:0001434,6.96e-30,100;UBERON:0002384,3.01e-16,371;UBERON:0002204,4.64e-13,167;UBERON:0003081,2.71e-12,203 | |||
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|short_description=p@chr6:20319928..20319935,+ | |short_description=p@chr6:20319928..20319935,+ | ||
}} | }} |
Latest revision as of 22:34, 30 July 2015
Short description: | p@chr6:20319928..20319935, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:20319928..20319935, + |
Coexpression cluster: | C3940_CD14_Natural_CD8_Basophils_CD19_CD4_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.63e-43 | 76 |
hematopoietic system | 9.18e-40 | 98 |
blood island | 9.18e-40 | 98 |
bone element | 3.27e-39 | 82 |
immune system | 1.12e-36 | 93 |
hemolymphoid system | 8.61e-35 | 108 |
skeletal element | 1.33e-34 | 90 |
skeletal system | 6.96e-30 | 100 |
connective tissue | 3.01e-16 | 371 |
musculoskeletal system | 4.64e-13 | 167 |
lateral plate mesoderm | 2.71e-12 | 203 |