FFCP PHASE1:Hg19::chr6:170862436..170862458,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:170862436..170862458,+
|short_description=p@chr6:170862436..170862458,+
|description=CAGE_peak_at_chr6:170862436..170862458,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:170862436..170862458,+ | |||
|coexpression_cluster_id=C677 | |||
|description=CAGE_peak_at_chr6:170862436..170862458,+ | |||
|id=chr6:170862436..170862458,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.35e-32!140;CL:0000037!1.39e-30!172;CL:0000566!1.39e-30!172;CL:0002031!4.36e-30!124;CL:0000988!3.91e-29!182;CL:0002057!6.93e-29!42;CL:0002032!1.34e-28!165;CL:0000837!1.34e-28!165;CL:0000860!4.14e-28!45;CL:0002087!5.14e-26!119;CL:0000766!1.35e-21!76;CL:0000557!2.68e-21!71;CL:0000839!2.34e-19!70;CL:0002009!7.44e-19!65;CL:0000763!1.43e-18!112;CL:0000049!1.43e-18!112;CL:0002194!8.79e-18!63;CL:0000576!8.79e-18!63;CL:0000040!8.79e-18!63;CL:0000559!8.79e-18!63;CL:0000134!3.63e-11!358;CL:0002320!1.37e-10!365;CL:0000219!6.24e-10!390;CL:0000838!7.74e-10!52;CL:0000542!1.89e-09!53;CL:0000051!1.89e-09!53;CL:0000048!3.64e-07!430;CL:0000034!8.46e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.01e-57;33!CL:0002057;9.01e-57;33!CL:0000473;2.70e-41;39!CL:0000234;2.70e-41;39!CL:0000576;4.75e-39;48!CL:0000766;5.04e-27;69!CL:0002393;3.65e-16;6!CL:0002397;3.65e-16;6!CL:0000763;1.84e-14;100!CL:0002087;8.79e-14;104!CL:0000767;3.16e-13;3!CL:0000094;1.53e-08;8!CL:0000738;7.25e-08;136!CL:0000988;3.51e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.08e-71,42;CL:0002057,1.08e-71,42;CL:0000473,8.30e-62,48;CL:0000234,8.30e-62,48;CL:0000766,6.79e-58,72;CL:0000557,5.56e-51,67;CL:0000839,1.69e-48,66;CL:0002194,5.70e-48,59;CL:0000576,5.70e-48,59;CL:0000040,5.70e-48,59;CL:0000559,5.70e-48,59;CL:0002009,3.48e-46,61;CL:0000738,9.45e-41,136;CL:0000763,2.86e-38,108;CL:0000049,2.86e-38,108;CL:0002031,4.62e-35,120;CL:0000037,5.55e-35,168;CL:0002032,4.92e-33,161;CL:0000837,4.92e-33,161;CL:0000988,1.02e-32,177;CL:0002087,1.21e-32,115;CL:0000767,2.82e-13,3;CL:0000134,3.07e-13,354;CL:0002320,8.66e-13,361;CL:0000219,4.83e-12,386;CL:0002393,1.24e-10,9;CL:0002397,1.24e-10,9;CL:0000034,2.16e-09,441;CL:0000048,2.90e-09,427;CL:0000723,5.36e-09,433;CL:0000094,1.46e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-52;42!CL:0000049;5.58e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.27e-20!80;UBERON:0002390!5.66e-20!102;UBERON:0003061!5.66e-20!102;UBERON:0001474!2.12e-19!86;UBERON:0002193!8.83e-17!112;UBERON:0002405!5.41e-15!115;UBERON:0004765!9.37e-15!101;UBERON:0001434!9.37e-15!101;UBERON:0002384!1.25e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.79e-47,76;UBERON:0001474,2.84e-43,82;UBERON:0004765,9.38e-39,90;UBERON:0002405,2.94e-37,93;UBERON:0002390,5.76e-35,98;UBERON:0003061,5.76e-35,98;UBERON:0001434,4.10e-34,100;UBERON:0002193,5.15e-31,108;UBERON:0002204,2.62e-17,167;UBERON:0003081,4.45e-15,203;UBERON:0002384,3.56e-12,371;UBERON:0000926,2.91e-08,315;UBERON:0004120,2.91e-08,315;UBERON:0006603,2.91e-08,315 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0.152826811495903,0.164201178899891,0.157421562627358,4.72037132218685,5.37361157336098,5.57338043937874,0.919421224478927,0,0,0,0,3.22960483268332,6.09394949385065,2.4065333696417,2.38711957787437,0.447830948479849,0.32389366601898,0,1.89017710413434,0.377875943688809,1.4555043671269,1.39457422143411,4.11167888021826,6.81354015969228,1.43846196161075,4.09857130446561,8.51336027598907,3.44745680736619,5.16387746867061,1.35426486594342,0.941211697713023,0.545812300115692,2.69668181334102,1.22433556948361,1.28371610830437,1.27867425159808,2.63881040149373,3.19141852194611,2.55734850319616,1.45104619314292,0.56738522469114,0,4.52247597462138,7.82224377630302,4.77815458351257,1.21079900526674,0,3.16462387440884,0.211255286311942,1.06302149982522,1.88692780957538,0.336985893439485,0.300353785683013,0.32145117339416,0,0.39783335439818,0,1.75996244461323,0.546138611262131,0.889509253863555,1.28019066769952,0.400395987036012,1.14950487990897,0.661044872784862,0.954053754535364,0.569212969109448,0,0,0,2.80254281490768,0.526768169550154,0.786839080455332,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0.883817722424512,0,0.270803863765016,0.384273959177026,0.520237390239513,0.493313713811028,0.829050053357545,0,0.444859689486181,0,0,0.339928028092699,0.383220493601921,0.68725489096526,0,0.318565414324097,0,0,0.451725357233318,0.895906278080929,0,1.18388626022008,0,0.80642697289893,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0.238490624305342,1.14398982156026,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.829312462163088,1.15295962733569,1.2624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,1.37921532141349,0.646882724578552,1.15508732651774,0,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0.106824071127473,0,0.245040215981032,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.689486746482929,0.583209226766509,0,0,0.241192877250816,0,1.10579259931225,0.295547618953547,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0.470940769185074,0.166211681900156,0,0,0.335643173951685,0,0,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0.60129367765797,0.103688191397247,0,0.330991955875499,0,1.19472429772959,0,0,0,0,0.0870592065804026,0,0,0,0.146178634172371,0.0821154570532092,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0.288109595976299,0,0,0,0,0.203996435272644,0,0,0.273810757783986,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.196854963029498,0.254019996197353,0,0,0,0.137539436597234,0.415440338029185,0.2249738915515,0.77380195455795,0,0.670869375198532,0.0788057072991982,0,0,0,0.383830394638891,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0.276516872303462,0.194860308839388,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0.212574920101683,0,0,0,0.315446980005013,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0.206686796501184,0.253663240775627,0,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0,0.171488009437418,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.327796715891087,0,0,0,0,0.250707539292375,0.303114792872958,1.87574891109325,0,0,0,0,0.0645889098360061,0.372448285775147,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.179650404213174,2.34640942403454,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0.152826811495903,0.164201178899891,0.157421562627358,4.72037132218685,5.37361157336098,5.57338043937874,0.919421224478927,0,0,0,0,3.22960483268332,6.09394949385065,2.4065333696417,2.38711957787437,0.447830948479849,0.32389366601898,0,1.89017710413434,0.377875943688809,1.4555043671269,1.39457422143411,4.11167888021826,6.81354015969228,1.43846196161075,4.09857130446561,8.51336027598907,3.44745680736619,5.16387746867061,1.35426486594342,0.941211697713023,0.545812300115692,2.69668181334102,1.22433556948361,1.28371610830437,1.27867425159808,2.63881040149373,3.19141852194611,2.55734850319616,1.45104619314292,0.56738522469114,0,4.52247597462138,7.82224377630302,4.77815458351257,1.21079900526674,0,3.16462387440884,0.211255286311942,1.06302149982522,1.88692780957538,0.336985893439485,0.300353785683013,0.32145117339416,0,0.39783335439818,0,1.75996244461323,0.546138611262131,0.889509253863555,1.28019066769952,0.400395987036012,1.14950487990897,0.661044872784862,0.954053754535364,0.569212969109448,0,0,0,2.80254281490768,0.526768169550154,0.786839080455332,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0.883817722424512,0,0.270803863765016,0.384273959177026,0.520237390239513,0.493313713811028,0.829050053357545,0,0.444859689486181,0,0,0.339928028092699,0.383220493601921,0.68725489096526,0,0.318565414324097,0,0,0.451725357233318,0.895906278080929,0,1.18388626022008,0,0.80642697289893,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0.238490624305342,1.14398982156026,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.829312462163088,1.15295962733569,1.2624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,1.37921532141349,0.646882724578552,1.15508732651774,0,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0.106824071127473,0,0.245040215981032,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.689486746482929,0.583209226766509,0,0,0.241192877250816,0,1.10579259931225,0.295547618953547,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0.470940769185074,0.166211681900156,0,0,0.335643173951685,0,0,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0.60129367765797,0.103688191397247,0,0.330991955875499,0,1.19472429772959,0,0,0,0,0.0870592065804026,0,0,0,0.146178634172371,0.0821154570532092,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0.288109595976299,0,0,0,0,0.203996435272644,0,0,0.273810757783986,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.196854963029498,0.254019996197353,0,0,0,0.137539436597234,0.415440338029185,0.2249738915515,0.77380195455795,0,0.670869375198532,0.0788057072991982,0,0,0,0.383830394638891,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0.276516872303462,0.194860308839388,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0.212574920101683,0,0,0,0.315446980005013,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0.206686796501184,0.253663240775627,0,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0,0.171488009437418,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.327796715891087,0,0,0,0,0.250707539292375,0.303114792872958,1.87574891109325,0,0,0,0,0.0645889098360061,0.372448285775147,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.179650404213174,2.34640942403454,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr6:170862436..170862458,+ | |||
}} | }} |
Latest revision as of 22:21, 30 July 2015
Short description: | p@chr6:170862436..170862458, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:170862436..170862458, + |
Coexpression cluster: | C677_Basophils_CD14_Eosinophils_Neutrophils_CD34_Peripheral_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.79e-47 | 76 |
bone element | 2.84e-43 | 82 |
skeletal element | 9.38e-39 | 90 |
immune system | 2.94e-37 | 93 |
hematopoietic system | 5.76e-35 | 98 |
blood island | 5.76e-35 | 98 |
skeletal system | 4.10e-34 | 100 |
hemolymphoid system | 5.15e-31 | 108 |
musculoskeletal system | 2.62e-17 | 167 |
lateral plate mesoderm | 4.45e-15 | 203 |
connective tissue | 3.56e-12 | 371 |
mesoderm | 2.91e-08 | 315 |
mesoderm-derived structure | 2.91e-08 | 315 |
presumptive mesoderm | 2.91e-08 | 315 |