FFCP PHASE1:Hg19::chr6:170533335..170533355,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:170533335..170533355,+ | |||
|coexpression_cluster_id=C461 | |||
|description=CAGE_peak_at_chr6:170533335..170533355,+ | |description=CAGE_peak_at_chr6:170533335..170533355,+ | ||
|id=chr6:170533335..170533355,+ | |id=chr6:170533335..170533355,+ | ||
|ontology_enrichment_celltype=CL:0002251!2.19e-14!21;CL:0002076!2.41e-14!43;CL:0000244!8.88e-12!4;CL:0000731!8.88e-12!4;CL:0000223!8.60e-10!59;CL:0000066!2.95e-08!254 | |ontology_enrichment_celltype=CL:0002251!2.19e-14!21;CL:0002076!2.41e-14!43;CL:0000244!8.88e-12!4;CL:0000731!8.88e-12!4;CL:0000223!8.60e-10!59;CL:0000066!2.95e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002251;1.21e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,1.17e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008814;5.48e-18;2!UBERON:0010056;5.48e-18;2 | |||
|ontology_enrichment_disease=DOID:1749!4.34e-22!14;DOID:305!1.64e-08!106;DOID:162!1.13e-07!235;DOID:14566!2.10e-07!239 | |ontology_enrichment_disease=DOID:1749!4.34e-22!14;DOID:305!1.64e-08!106;DOID:162!1.13e-07!235;DOID:14566!2.10e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.32e-16;31!DOID:1240;4.77e-14;39!DOID:1749;1.64e-10;14!DOID:2531;1.83e-07;51!DOID:0060083;1.83e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.63e-17,31;DOID:1240,4.68e-14,39;DOID:2531,6.89e-11,51;DOID:0060083,6.89e-11,51;DOID:1749,1.57e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!2.45e-21!4;UBERON:0004785!2.45e-21!4;UBERON:0003729!4.26e-17!5;UBERON:0000365!2.69e-16!5;UBERON:0005910!1.33e-13!6;UBERON:0000974!1.13e-12!10;UBERON:0000344!9.89e-11!12;UBERON:0004119!3.44e-07!169;UBERON:0000925!3.44e-07!169;UBERON:0006595!3.44e-07!169 | |ontology_enrichment_uberon=UBERON:0003343!2.45e-21!4;UBERON:0004785!2.45e-21!4;UBERON:0003729!4.26e-17!5;UBERON:0000365!2.69e-16!5;UBERON:0005910!1.33e-13!6;UBERON:0000974!1.13e-12!10;UBERON:0000344!9.89e-11!12;UBERON:0004119!3.44e-07!169;UBERON:0000925!3.44e-07!169;UBERON:0006595!3.44e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.06e-34;4!UBERON:0004785;5.06e-34;4!UBERON:0000974;4.34e-23;6!UBERON:0001723;1.85e-12;3!UBERON:0001033;1.85e-12;3!UBERON:0003729;3.05e-11;13!UBERON:0000161;5.35e-08;19!UBERON:0000166;5.35e-08;19!UBERON:0000344;1.21e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,4.28e-34,4;UBERON:0004785,4.28e-34,4;UBERON:0000974,2.49e-14,10;UBERON:0001723,1.85e-12,3;UBERON:0001033,1.85e-12,3;UBERON:0010056,1.85e-12,3;UBERON:0003729,2.90e-11,13;UBERON:0000344,1.17e-07,20;UBERON:0000166,4.79e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,3.37964840739304,3.57881772627865,2.83643540910244,1.17232857241224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.707818340086442,3.66857197043358,18.4841065840541,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,3.37964840739304,3.57881772627865,2.83643540910244,1.17232857241224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.707818340086442,3.66857197043358,18.4841065840541,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:170533335..170533355,+ | |short_description=p@chr6:170533335..170533355,+ | ||
}} | }} |
Latest revision as of 22:20, 30 July 2015
Short description: | p@chr6:170533335..170533355, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:170533335..170533355, + |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 1.17e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 4.28e-34 | 4 |
respiratory system mucosa | 4.28e-34 | 4 |
neck | 2.49e-14 | 10 |
tongue | 1.85e-12 | 3 |
gustatory system | 1.85e-12 | 3 |
future tongue | 1.85e-12 | 3 |
mouth mucosa | 2.90e-11 | 13 |
mucosa | 1.17e-07 | 20 |
oral opening | 4.79e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.63e-17 | 31 |
leukemia | 4.68e-14 | 39 |
hematologic cancer | 6.89e-11 | 51 |
immune system cancer | 6.89e-11 | 51 |
squamous cell carcinoma | 1.57e-10 | 14 |