FFCP PHASE1:Hg19::chr6:170122964..170122975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:170122964..170122975,+ | |||
|coexpression_cluster_id=C722 | |||
|description=CAGE_peak_at_chr6:170122964..170122975,+ | |description=CAGE_peak_at_chr6:170122964..170122975,+ | ||
|id=chr6:170122964..170122975,+ | |id=chr6:170122964..170122975,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.70e-21!140;CL:0000624!2.24e-19!6;CL:0000838!1.17e-15!52;CL:0000037!1.37e-15!172;CL:0000566!1.37e-15!172;CL:0000988!2.46e-15!182;CL:0000542!2.83e-15!53;CL:0000051!2.83e-15!53;CL:0002031!4.04e-15!124;CL:0002087!1.29e-14!119;CL:0000791!1.88e-13!18;CL:0000789!1.88e-13!18;CL:0002420!1.88e-13!18;CL:0002419!1.88e-13!18;CL:0000790!1.88e-13!18;CL:0002032!2.99e-12!165;CL:0000837!2.99e-12!165;CL:0000084!2.99e-11!25;CL:0000827!2.99e-11!25;CL:0000623!6.21e-11!3;CL:0000825!6.21e-11!3;CL:0000898!3.79e-10!3;CL:0000842!3.91e-10!3;CL:0000080!9.34e-09!6;CL:0000224!1.08e-07!4;CL:0000815!2.83e-07!2;CL:0000792!2.83e-07!2;CL:0002677!2.83e-07!2 | |ontology_enrichment_celltype=CL:0000738!2.70e-21!140;CL:0000624!2.24e-19!6;CL:0000838!1.17e-15!52;CL:0000037!1.37e-15!172;CL:0000566!1.37e-15!172;CL:0000988!2.46e-15!182;CL:0000542!2.83e-15!53;CL:0000051!2.83e-15!53;CL:0002031!4.04e-15!124;CL:0002087!1.29e-14!119;CL:0000791!1.88e-13!18;CL:0000789!1.88e-13!18;CL:0002420!1.88e-13!18;CL:0002419!1.88e-13!18;CL:0000790!1.88e-13!18;CL:0002032!2.99e-12!165;CL:0000837!2.99e-12!165;CL:0000084!2.99e-11!25;CL:0000827!2.99e-11!25;CL:0000623!6.21e-11!3;CL:0000825!6.21e-11!3;CL:0000898!3.79e-10!3;CL:0000842!3.91e-10!3;CL:0000080!9.34e-09!6;CL:0000224!1.08e-07!4;CL:0000815!2.83e-07!2;CL:0000792!2.83e-07!2;CL:0002677!2.83e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000623;6.12e-46;3!CL:0000791;2.49e-30;18!CL:0000789;2.49e-30;18!CL:0002419;2.49e-30;18!CL:0000624;2.21e-23;6!CL:0000084;8.14e-22;25!CL:0000542;4.14e-14;53!CL:0000097;2.44e-13;5!CL:0000625;2.77e-13;11!CL:0000163;8.17e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.74e-46,3;CL:0000825,7.74e-46,3;CL:0000791,1.93e-30,18;CL:0000789,1.93e-30,18;CL:0002420,1.93e-30,18;CL:0002419,1.93e-30,18;CL:0000790,1.93e-30,18;CL:0000838,2.20e-28,52;CL:0000542,7.80e-28,53;CL:0000051,7.80e-28,53;CL:0000624,2.13e-23,6;CL:0000084,6.79e-22,25;CL:0000827,6.79e-22,25;CL:0002031,3.00e-20,120;CL:0000738,9.17e-18,136;CL:0002087,6.87e-15,115;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177;CL:0000097,2.09e-13,5;CL:0002028,2.09e-13,5;CL:0000625,2.30e-13,11;CL:0000163,7.51e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000790;2.49e-30;18!CL:0000051;4.14e-14;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr6:170122964..170122975,+ | |short_description=p@chr6:170122964..170122975,+ | ||
}} | }} |
Latest revision as of 22:17, 30 July 2015
Short description: | p@chr6:170122964..170122975, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:170122964..170122975, + |
Coexpression cluster: | C722_Mast_Natural_CD8_CD4_CD19_mature_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.74e-46 | 3 |
pro-NK cell | 7.74e-46 | 3 |
mature alpha-beta T cell | 1.93e-30 | 18 |
alpha-beta T cell | 1.93e-30 | 18 |
immature T cell | 1.93e-30 | 18 |
mature T cell | 1.93e-30 | 18 |
immature alpha-beta T cell | 1.93e-30 | 18 |
lymphoid lineage restricted progenitor cell | 2.20e-28 | 52 |
lymphocyte | 7.80e-28 | 53 |
common lymphoid progenitor | 7.80e-28 | 53 |
CD4-positive, alpha-beta T cell | 2.13e-23 | 6 |
T cell | 6.79e-22 | 25 |
pro-T cell | 6.79e-22 | 25 |
hematopoietic lineage restricted progenitor cell | 3.00e-20 | 120 |
leukocyte | 9.17e-18 | 136 |
nongranular leukocyte | 6.87e-15 | 115 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
mast cell | 2.09e-13 | 5 |
basophil mast progenitor cell | 2.09e-13 | 5 |
CD8-positive, alpha-beta T cell | 2.30e-13 | 11 |
endocrine cell | 7.51e-08 | 9 |