FFCP PHASE1:Hg19::chr6:170089405..170089420,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:170089405..170089420,- | |||
|description=CAGE_peak_at_chr6:170089405..170089420,- | |description=CAGE_peak_at_chr6:170089405..170089420,- | ||
|id=chr6:170089405..170089420,- | |id=chr6:170089405..170089420,- | ||
|ontology_enrichment_celltype=CL:0002092!3.00e-07!10;CL:0000062!5.07e-07!11;CL:0000375!5.07e-07!11;CL:0000335!5.07e-07!11 | |ontology_enrichment_celltype=CL:0002092!3.00e-07!10;CL:0000062!5.07e-07!11;CL:0000375!5.07e-07!11;CL:0000335!5.07e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000062;8.06e-23;9!CL:0000322;8.31e-09;3!CL:0000135;1.40e-08;3!CL:0000388;1.40e-08;3!CL:0002563;9.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,8.15e-19,11;CL:0000375,8.15e-19,11;CL:0000335,8.15e-19,11;CL:0000322,8.31e-09,3;CL:0000135,1.30e-08,3;CL:0000388,1.30e-08,3;CL:0002563,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000335;8.15e-19;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;1.48e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.48e-12,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.48e-12;2!UBERON:0002173;1.48e-12;2!UBERON:0002186;1.48e-12;2!UBERON:0004821;8.31e-09;3!UBERON:0007499;8.31e-09;3!UBERON:0003215;8.31e-09;3!UBERON:0010368;8.31e-09;3!UBERON:0009911;8.31e-09;3!UBERON:0002299;8.31e-09;3!UBERON:0006524;8.31e-09;3!UBERON:0008874;8.31e-09;3!UBERON:0002169;8.31e-09;3!UBERON:0004894;8.31e-09;3!UBERON:0007846;1.40e-08;3!UBERON:0000043;1.40e-08;3!UBERON:0007845;1.40e-08;3!UBERON:0009856;6.50e-07;4!UBERON:0001242;9.63e-07;4!UBERON:0001262;9.63e-07;4!UBERON:0004786;9.63e-07;4!UBERON:0004808;9.63e-07;4!UBERON:0001277;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.48e-12,2;UBERON:0002173,1.48e-12,2;UBERON:0002186,1.48e-12,2;UBERON:0004821,8.31e-09,3;UBERON:0003215,8.31e-09,3;UBERON:0010368,8.31e-09,3;UBERON:0009911,8.31e-09,3;UBERON:0002299,8.31e-09,3;UBERON:0006524,8.31e-09,3;UBERON:0008874,8.31e-09,3;UBERON:0002169,8.31e-09,3;UBERON:0004894,8.31e-09,3;UBERON:0007846,1.30e-08,3;UBERON:0000043,1.30e-08,3;UBERON:0007845,1.30e-08,3;UBERON:0001242,9.63e-07,4;UBERON:0001262,9.63e-07,4;UBERON:0004786,9.63e-07,4;UBERON:0004808,9.63e-07,4;UBERON:0001277,9.63e-07,4 | |||
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| ||
|short_description=p@chr6:170089405..170089420,- | |short_description=p@chr6:170089405..170089420,- | ||
}} | }} |
Latest revision as of 22:17, 30 July 2015
Short description: | p@chr6:170089405..170089420, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:170089405..170089420, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 8.15e-19 | 11 |
osteoprogenitor cell | 8.15e-19 | 11 |
mesenchyme condensation cell | 8.15e-19 | 11 |
pneumocyte | 8.31e-09 | 3 |
fibrocyte | 1.30e-08 | 3 |
tendon cell | 1.30e-08 | 3 |
intestinal epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.48e-12 | 2 |
alveolar duct | 1.48e-12 | 2 |
bronchiole | 1.48e-12 | 2 |
pulmonary alveolus epithelium | 8.31e-09 | 3 |
alveolus | 8.31e-09 | 3 |
pulmonary lobule | 8.31e-09 | 3 |
lobule | 8.31e-09 | 3 |
alveolus of lung | 8.31e-09 | 3 |
alveolar system | 8.31e-09 | 3 |
pulmonary acinus | 8.31e-09 | 3 |
alveolar sac | 8.31e-09 | 3 |
alveolar wall | 8.31e-09 | 3 |
dense regular connective tissue | 1.30e-08 | 3 |
tendon | 1.30e-08 | 3 |
regular connective tissue | 1.30e-08 | 3 |
intestinal mucosa | 9.63e-07 | 4 |
wall of intestine | 9.63e-07 | 4 |
gastrointestinal system mucosa | 9.63e-07 | 4 |
gastrointestinal system epithelium | 9.63e-07 | 4 |
intestinal epithelium | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.48e-12 | 2 |