FFCP PHASE1:Hg19::chr6:163507552..163507560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:163507552..163507560,+ | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_at_chr6:163507552..163507560,+ | |description=CAGE_peak_at_chr6:163507552..163507560,+ | ||
|id=chr6:163507552..163507560,+ | |id=chr6:163507552..163507560,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;9.37e-99;1!UBERON:0005062;7.14e-26;4!UBERON:0007284;7.14e-26;4!UBERON:0004872;1.65e-15;7 | |||
|ontology_enrichment_disease=DOID:114!5.07e-34!2;DOID:178!1.03e-17!1;DOID:326!1.03e-17!1;DOID:3978!1.03e-17!1;DOID:3394!1.03e-17!1;DOID:5844!1.03e-17!1;DOID:1287!1.45e-17!4 | |ontology_enrichment_disease=DOID:114!5.07e-34!2;DOID:178!1.03e-17!1;DOID:326!1.03e-17!1;DOID:3978!1.03e-17!1;DOID:3394!1.03e-17!1;DOID:5844!1.03e-17!1;DOID:1287!1.45e-17!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!9.27e-39!27;UBERON:0003978!2.35e-23!3;UBERON:0009751!2.35e-23!3;UBERON:0000946!2.35e-23!3;UBERON:0002523!2.35e-23!3;UBERON:0005983!2.35e-23!3;UBERON:0002165!2.35e-23!3;UBERON:0002062!2.35e-23!3;UBERON:0007280!2.35e-23!3;UBERON:0004151!5.15e-23!3;UBERON:0002146!3.16e-18!1;UBERON:0005623!3.16e-18!1;UBERON:0002135!4.44e-18!1;UBERON:0002426!5.26e-18!1;UBERON:0003831!5.26e-18!1;UBERON:0003898!5.26e-18!1;UBERON:0004830!5.26e-18!1;UBERON:0001774!5.26e-18!1;UBERON:0003830!5.26e-18!1;UBERON:0005175!5.26e-18!1;UBERON:0003897!5.26e-18!1;UBERON:0001103!5.26e-18!1;UBERON:0010084!5.26e-18!1;UBERON:0002079!6.23e-18!1;UBERON:0002084!7.37e-18!1;UBERON:0002082!7.37e-18!1;UBERON:0004706!7.37e-18!1;UBERON:0000948!1.75e-17!24;UBERON:0005498!1.75e-17!24;UBERON:0004140!1.75e-17!24;UBERON:0009881!1.75e-17!24;UBERON:0004141!1.75e-17!24;UBERON:0003084!1.75e-17!24;UBERON:0007005!1.75e-17!24;UBERON:0004139!1.75e-17!24;UBERON:0004291!1.75e-17!24;UBERON:0003103!6.71e-15!69;UBERON:0007023!1.47e-13!115;UBERON:0002133!1.03e-09!2;UBERON:0001630!1.12e-09!2;UBERON:0005090!1.12e-09!2;UBERON:0002081!1.22e-09!2;UBERON:0000341!1.71e-09!2;UBERON:0001009!7.19e-09!113;UBERON:0002300!8.15e-07!3 | |ontology_enrichment_uberon=UBERON:0007100!9.27e-39!27;UBERON:0003978!2.35e-23!3;UBERON:0009751!2.35e-23!3;UBERON:0000946!2.35e-23!3;UBERON:0002523!2.35e-23!3;UBERON:0005983!2.35e-23!3;UBERON:0002165!2.35e-23!3;UBERON:0002062!2.35e-23!3;UBERON:0007280!2.35e-23!3;UBERON:0004151!5.15e-23!3;UBERON:0002146!3.16e-18!1;UBERON:0005623!3.16e-18!1;UBERON:0002135!4.44e-18!1;UBERON:0002426!5.26e-18!1;UBERON:0003831!5.26e-18!1;UBERON:0003898!5.26e-18!1;UBERON:0004830!5.26e-18!1;UBERON:0001774!5.26e-18!1;UBERON:0003830!5.26e-18!1;UBERON:0005175!5.26e-18!1;UBERON:0003897!5.26e-18!1;UBERON:0001103!5.26e-18!1;UBERON:0010084!5.26e-18!1;UBERON:0002079!6.23e-18!1;UBERON:0002084!7.37e-18!1;UBERON:0002082!7.37e-18!1;UBERON:0004706!7.37e-18!1;UBERON:0000948!1.75e-17!24;UBERON:0005498!1.75e-17!24;UBERON:0004140!1.75e-17!24;UBERON:0009881!1.75e-17!24;UBERON:0004141!1.75e-17!24;UBERON:0003084!1.75e-17!24;UBERON:0007005!1.75e-17!24;UBERON:0004139!1.75e-17!24;UBERON:0004291!1.75e-17!24;UBERON:0003103!6.71e-15!69;UBERON:0007023!1.47e-13!115;UBERON:0002133!1.03e-09!2;UBERON:0001630!1.12e-09!2;UBERON:0005090!1.12e-09!2;UBERON:0002081!1.22e-09!2;UBERON:0000341!1.71e-09!2;UBERON:0001009!7.19e-09!113;UBERON:0002300!8.15e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;2.55e-98;1!UBERON:0005623;2.55e-98;1!UBERON:0003978;5.96e-34;3!UBERON:0000946;5.96e-34;3!UBERON:0000948;3.41e-19;22!UBERON:0007100;4.64e-17;25!UBERON:0010313;3.02e-11;10!UBERON:0003103;1.57e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.55e-98,1;UBERON:0005623,2.55e-98,1;UBERON:0003978,5.96e-34,3;UBERON:0009751,5.96e-34,3;UBERON:0000946,5.96e-34,3;UBERON:0002523,5.96e-34,3;UBERON:0005983,5.96e-34,3;UBERON:0002165,5.96e-34,3;UBERON:0002062,5.96e-34,3;UBERON:0007280,5.96e-34,3;UBERON:0000948,1.03e-17,24;UBERON:0005498,1.03e-17,24;UBERON:0004140,1.03e-17,24;UBERON:0009881,1.03e-17,24;UBERON:0004141,1.03e-17,24;UBERON:0003084,1.03e-17,24;UBERON:0007005,1.03e-17,24;UBERON:0004139,1.03e-17,24;UBERON:0004291,1.03e-17,24;UBERON:0007100,6.71e-16,27;UBERON:0004797,1.91e-15,7;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0005062,3.02e-11,10;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p@chr6:163507552..163507560,+ | |short_description=p@chr6:163507552..163507560,+ | ||
}} | }} |
Latest revision as of 21:53, 30 July 2015
Short description: | p@chr6:163507552..163507560, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:163507552..163507560, + |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 2.55e-98 | 1 |
semi-lunar valve | 2.55e-98 | 1 |
valve | 5.96e-34 | 3 |
cardiac mesenchyme | 5.96e-34 | 3 |
cardial valve | 5.96e-34 | 3 |
tunica intima | 5.96e-34 | 3 |
heart layer | 5.96e-34 | 3 |
endocardium | 5.96e-34 | 3 |
endocardial cushion | 5.96e-34 | 3 |
presumptive endocardium | 5.96e-34 | 3 |
heart | 1.03e-17 | 24 |
primitive heart tube | 1.03e-17 | 24 |
primary heart field | 1.03e-17 | 24 |
anterior lateral plate mesoderm | 1.03e-17 | 24 |
heart tube | 1.03e-17 | 24 |
heart primordium | 1.03e-17 | 24 |
cardiac mesoderm | 1.03e-17 | 24 |
cardiogenic plate | 1.03e-17 | 24 |
heart rudiment | 1.03e-17 | 24 |
primary circulatory organ | 6.71e-16 | 27 |
blood vessel layer | 1.91e-15 | 7 |
neural crest-derived structure | 3.02e-11 | 10 |
neural crest | 3.02e-11 | 10 |
neural fold | 3.02e-11 | 10 |
compound organ | 4.47e-07 | 68 |