FFCP PHASE1:Hg19::chr6:155685195..155685203,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:155685195..155685203,+ | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_at_chr6:155685195..155685203,+ | |description=CAGE_peak_at_chr6:155685195..155685203,+ | ||
|id=chr6:155685195..155685203,+ | |id=chr6:155685195..155685203,+ | ||
|ontology_enrichment_celltype=CL:0000946!4.44e-18!1;CL:0000786!4.44e-18!1;CL:0000980!4.44e-18!1;CL:1001319!1.44e-17!1;CL:1000600!1.44e-17!1;CL:0000785!1.03e-09!2;CL:0000955!1.03e-09!2;CL:0000818!1.03e-09!2;CL:0000954!1.03e-09!2;CL:0000816!1.03e-09!2;CL:0000322!6.50e-07!3;CL:0000817!6.88e-07!3;CL:0000064!9.64e-07!3;CL:0005012!9.64e-07!3;CL:0000067!9.64e-07!3;CL:0002304!9.64e-07!3 | |ontology_enrichment_celltype=CL:0000946!4.44e-18!1;CL:0000786!4.44e-18!1;CL:0000980!4.44e-18!1;CL:1001319!1.44e-17!1;CL:1000600!1.44e-17!1;CL:0000785!1.03e-09!2;CL:0000955!1.03e-09!2;CL:0000818!1.03e-09!2;CL:0000954!1.03e-09!2;CL:0000816!1.03e-09!2;CL:0000322!6.50e-07!3;CL:0000817!6.88e-07!3;CL:0000064!9.64e-07!3;CL:0005012!9.64e-07!3;CL:0000067!9.64e-07!3;CL:0002304!9.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;4.09e-23;3!CL:0002202;1.21e-08;9!CL:0002632;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,4.09e-23,3;CL:0002202,1.21e-08,9;CL:0002632,1.21e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10 | |||
|ontology_enrichment_disease=DOID:6193!7.37e-18!1;DOID:3910!9.46e-10!2;DOID:3350!1.33e-09!2 | |ontology_enrichment_disease=DOID:6193!7.37e-18!1;DOID:3910!9.46e-10!2;DOID:3350!1.33e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3910;7.05e-34;2!DOID:3908;1.83e-14;5!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,7.05e-34,2;DOID:3908,1.83e-14,5;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0004645!1.44e-17!1;UBERON:0001256!1.44e-17!1;UBERON:0001259!1.44e-17!1;UBERON:0004903!9.46e-10!2;UBERON:0002173!9.46e-10!2;UBERON:0002186!9.46e-10!2;UBERON:0001255!1.86e-09!2;UBERON:0001556!1.86e-09!2;UBERON:0004821!6.50e-07!3;UBERON:0003215!6.50e-07!3;UBERON:0002299!6.50e-07!3;UBERON:0006524!6.50e-07!3;UBERON:0008874!6.50e-07!3;UBERON:0002169!6.50e-07!3;UBERON:0004894!6.50e-07!3;UBERON:0001778!9.64e-07!3;UBERON:0001775!9.64e-07!3 | |ontology_enrichment_uberon=UBERON:0004645!1.44e-17!1;UBERON:0001256!1.44e-17!1;UBERON:0001259!1.44e-17!1;UBERON:0004903!9.46e-10!2;UBERON:0002173!9.46e-10!2;UBERON:0002186!9.46e-10!2;UBERON:0001255!1.86e-09!2;UBERON:0001556!1.86e-09!2;UBERON:0004821!6.50e-07!3;UBERON:0003215!6.50e-07!3;UBERON:0002299!6.50e-07!3;UBERON:0006524!6.50e-07!3;UBERON:0008874!6.50e-07!3;UBERON:0002169!6.50e-07!3;UBERON:0004894!6.50e-07!3;UBERON:0001778!9.64e-07!3;UBERON:0001775!9.64e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;7.05e-34;2!UBERON:0002173;7.05e-34;2!UBERON:0002186;7.05e-34;2!UBERON:0004821;4.09e-23;3!UBERON:0007499;4.09e-23;3!UBERON:0003215;4.09e-23;3!UBERON:0010368;4.09e-23;3!UBERON:0009911;4.09e-23;3!UBERON:0002299;4.09e-23;3!UBERON:0006524;4.09e-23;3!UBERON:0008874;4.09e-23;3!UBERON:0002169;4.09e-23;3!UBERON:0004894;4.09e-23;3!UBERON:0009856;1.03e-17;4!UBERON:0000058;6.56e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,7.05e-34,2;UBERON:0002173,7.05e-34,2;UBERON:0002186,7.05e-34,2;UBERON:0004821,4.09e-23,3;UBERON:0003215,4.09e-23,3;UBERON:0010368,4.09e-23,3;UBERON:0009911,4.09e-23,3;UBERON:0002299,4.09e-23,3;UBERON:0006524,4.09e-23,3;UBERON:0008874,4.09e-23,3;UBERON:0002169,4.09e-23,3;UBERON:0004894,4.09e-23,3 | |||
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|short_description=p@chr6:155685195..155685203,+ | |short_description=p@chr6:155685195..155685203,+ | ||
}} | }} |
Latest revision as of 21:16, 30 July 2015
Short description: | p@chr6:155685195..155685203, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:155685195..155685203, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 4.09e-23 | 3 |
epithelial cell of tracheobronchial tree | 1.21e-08 | 9 |
epithelial cell of lower respiratory tract | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 7.05e-34 | 2 |
alveolar duct | 7.05e-34 | 2 |
bronchiole | 7.05e-34 | 2 |
pulmonary alveolus epithelium | 4.09e-23 | 3 |
alveolus | 4.09e-23 | 3 |
pulmonary lobule | 4.09e-23 | 3 |
lobule | 4.09e-23 | 3 |
alveolus of lung | 4.09e-23 | 3 |
alveolar system | 4.09e-23 | 3 |
pulmonary acinus | 4.09e-23 | 3 |
alveolar sac | 4.09e-23 | 3 |
alveolar wall | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 7.05e-34 | 2 |
non-small cell lung carcinoma | 1.83e-14 | 5 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |