FFCP PHASE1:Hg19::chr6:149373615..149373627,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:149373615..149373627,+
|short_description=p@chr6:149373615..149373627,+
|description=CAGE_peak_at_chr6:149373615..149373627,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:149373615..149373627,+ | |||
|coexpression_cluster_id=C810 | |||
|description=CAGE_peak_at_chr6:149373615..149373627,+ | |||
|id=chr6:149373615..149373627,+ | |||
|ontology_enrichment_celltype=CL:0000080!1.82e-14!6;CL:0000945!1.54e-13!24;CL:0000826!1.54e-13!24;CL:0000838!3.76e-13!52;CL:0000542!7.03e-13!53;CL:0000051!7.03e-13!53;CL:0000946!1.57e-10!1;CL:0000786!1.57e-10!1;CL:0000980!1.57e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000946;4.69e-19;1!CL:0000786;4.69e-19;1!CL:0000945;5.74e-19;24!CL:0000542;3.51e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.69e-19,1;CL:0000786,4.69e-19,1;CL:0000980,4.69e-19,1;CL:0000945,5.63e-19,24;CL:0000826,5.63e-19,24;CL:0000838,8.35e-17,52;CL:0000542,1.75e-16,53;CL:0000051,1.75e-16,53;CL:0000785,3.27e-10,2;CL:0000955,3.27e-10,2;CL:0000818,3.27e-10,2;CL:0000954,3.27e-10,2;CL:0000816,3.27e-10,2;CL:0000988,1.65e-09,177;CL:0002087,2.45e-07,115;CL:0000817,3.16e-07,3;CL:0002031,5.12e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;3.27e-10;2!CL:0000051;3.51e-09;53 | |||
|ontology_enrichment_disease=DOID:630!2.08e-10!1;DOID:0050177!2.08e-10!1;DOID:0050427!2.08e-10!1;DOID:0060060!4.33e-10!1;DOID:0060061!4.33e-10!1;DOID:8691!4.33e-10!1;DOID:0060058!9.20e-09!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!6.86e-09!10;UBERON:0000358!6.86e-09!10;UBERON:0000307!6.86e-09!10;UBERON:0000091!6.86e-09!10;UBERON:0000087!6.86e-09!10;UBERON:0007806!6.86e-09!10;UBERON:0008780!6.86e-09!10;UBERON:0005728!6.86e-09!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.01e-16;10!UBERON:0000178;2.26e-11;15!UBERON:0000179;2.26e-11;15!UBERON:0000463;2.26e-11;15!UBERON:0000478;2.51e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.55e-17,10;UBERON:0000358,9.55e-17,10;UBERON:0000307,9.55e-17,10;UBERON:0000091,9.55e-17,10;UBERON:0000087,9.55e-17,10;UBERON:0007010,9.55e-17,10;UBERON:0007806,9.55e-17,10;UBERON:0008780,9.55e-17,10;UBERON:0005728,9.55e-17,10;UBERON:0000178,2.18e-11,15;UBERON:0000179,2.18e-11,15;UBERON:0000463,2.18e-11,15;UBERON:0000478,2.46e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,3.03772180964799,3.69940672174292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0.512365278902701,1.04047478047903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0311554675924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96521128680622,2.84197059576957,1.8795950910982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15464825135177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,3.03772180964799,3.69940672174292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0.512365278902701,1.04047478047903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0311554675924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96521128680622,2.84197059576957,1.8795950910982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15464825135177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | ||
|short_description=p@chr6:149373615..149373627,+ | |||
}} | }} |
Latest revision as of 20:46, 30 July 2015
Short description: | p@chr6:149373615..149373627, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:149373615..149373627, + |
Coexpression cluster: | C810_b_cord_xeroderma_adult_plasma_splenic_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.69e-19 | 1 |
plasma cell | 4.69e-19 | 1 |
plasmablast | 4.69e-19 | 1 |
lymphocyte of B lineage | 5.63e-19 | 24 |
pro-B cell | 5.63e-19 | 24 |
lymphoid lineage restricted progenitor cell | 8.35e-17 | 52 |
lymphocyte | 1.75e-16 | 53 |
common lymphoid progenitor | 1.75e-16 | 53 |
mature B cell | 3.27e-10 | 2 |
pre-B-II cell | 3.27e-10 | 2 |
transitional stage B cell | 3.27e-10 | 2 |
small pre-B-II cell | 3.27e-10 | 2 |
immature B cell | 3.27e-10 | 2 |
hematopoietic cell | 1.65e-09 | 177 |
nongranular leukocyte | 2.45e-07 | 115 |
precursor B cell | 3.16e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 5.12e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.55e-17 | 10 |
blastocyst | 9.55e-17 | 10 |
blastula | 9.55e-17 | 10 |
bilaminar disc | 9.55e-17 | 10 |
inner cell mass | 9.55e-17 | 10 |
cleaving embryo | 9.55e-17 | 10 |
connecting stalk | 9.55e-17 | 10 |
inner cell mass derived epiblast | 9.55e-17 | 10 |
extraembryonic mesoderm | 9.55e-17 | 10 |
blood | 2.18e-11 | 15 |
haemolymphatic fluid | 2.18e-11 | 15 |
organism substance | 2.18e-11 | 15 |
extraembryonic structure | 2.46e-07 | 24 |