FFCP PHASE1:Hg19::chr6:149353782..149353788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_ENST00000433442_5end | |association_with_transcript=-73bp_to_ENST00000433442_5end | ||
|cluster_id=chr6:149353782..149353788,- | |||
|coexpression_cluster_id=C810 | |coexpression_cluster_id=C810 | ||
|description=CAGE_peak_5_at_ENST00000433442_5end | |description=CAGE_peak_5_at_ENST00000433442_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000243!3.51e-13!15;CL:0000125!3.51e-13!15;CL:0000030!3.51e-13!15;CL:0000339!3.51e-13!15;CL:0000095!1.30e-11!17;CL:0000123!1.30e-11!17;CL:0002319!1.13e-07!25;CL:0000128!1.85e-07!7;CL:0000126!1.85e-07!7;CL:0000127!1.85e-07!7;CL:0002453!1.85e-07!7 | |ontology_enrichment_celltype=CL:0000243!3.51e-13!15;CL:0000125!3.51e-13!15;CL:0000030!3.51e-13!15;CL:0000339!3.51e-13!15;CL:0000095!1.30e-11!17;CL:0000123!1.30e-11!17;CL:0002319!1.13e-07!25;CL:0000128!1.85e-07!7;CL:0000126!1.85e-07!7;CL:0000127!1.85e-07!7;CL:0002453!1.85e-07!7 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3093!9.73e-09!11 | |ontology_enrichment_disease=DOID:3093!9.73e-09!11 | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.37e-29;1!DOID:0060061;2.37e-29;1!DOID:8691;2.37e-29;1 | |ontology_enrichment_disease_v019=DOID:0060060;2.37e-29;1!DOID:0060061;2.37e-29;1!DOID:8691;2.37e-29;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.37e-29,1;DOID:0060061,2.37e-29,1;DOID:8691,2.37e-29,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.37e-29;1!UBERON:0002331;4.27e-26;10!UBERON:0000178;1.10e-17;15!UBERON:0000179;1.10e-17;15!UBERON:0000463;1.10e-17;15!UBERON:0002390;6.20e-15;32!UBERON:0000478;2.43e-11;24!UBERON:0002193;6.01e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0007195;2.37e-29;1!UBERON:0002331;4.27e-26;10!UBERON:0000178;1.10e-17;15!UBERON:0000179;1.10e-17;15!UBERON:0000463;1.10e-17;15!UBERON:0002390;6.20e-15;32!UBERON:0000478;2.43e-11;24!UBERON:0002193;6.01e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.16e-29,1;UBERON:0002331,3.30e-26,10;UBERON:0000358,3.30e-26,10;UBERON:0000307,3.30e-26,10;UBERON:0000091,3.30e-26,10;UBERON:0000087,3.30e-26,10;UBERON:0007010,3.30e-26,10;UBERON:0007806,3.30e-26,10;UBERON:0008780,3.30e-26,10;UBERON:0005728,3.30e-26,10;UBERON:0000178,9.28e-18,15;UBERON:0000179,9.28e-18,15;UBERON:0000463,9.28e-18,15;UBERON:0000478,2.19e-11,24 | |||
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| ||
|short_description=p5@ENST00000433442 | |short_description=p5@ENST00000433442 | ||
}} | }} |
Latest revision as of 20:45, 30 July 2015
Short description: | p5@ENST00000433442 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000433442_5end |
Coexpression cluster: | C810_b_cord_xeroderma_adult_plasma_splenic_hairy |
Association with transcript: | -73bp_to_ENST00000433442_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.16e-29 | 1 |
umbilical cord | 3.30e-26 | 10 |
blastocyst | 3.30e-26 | 10 |
blastula | 3.30e-26 | 10 |
bilaminar disc | 3.30e-26 | 10 |
inner cell mass | 3.30e-26 | 10 |
cleaving embryo | 3.30e-26 | 10 |
connecting stalk | 3.30e-26 | 10 |
inner cell mass derived epiblast | 3.30e-26 | 10 |
extraembryonic mesoderm | 3.30e-26 | 10 |
blood | 9.28e-18 | 15 |
haemolymphatic fluid | 9.28e-18 | 15 |
organism substance | 9.28e-18 | 15 |
extraembryonic structure | 2.19e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.37e-29 | 1 |
cutaneous T cell lymphoma | 2.37e-29 | 1 |
mycosis fungoides | 2.37e-29 | 1 |