FFCP PHASE1:Hg19::chr6:138417591..138417635,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:138417591..138417635,-
|short_description=p@chr6:138417591..138417635,-
|description=CAGE_peak_at_chr6:138417591..138417635,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:138417591..138417635,- | |||
|coexpression_cluster_id=C1043 | |||
|description=CAGE_peak_at_chr6:138417591..138417635,- | |||
|id=chr6:138417591..138417635,- | |||
|ontology_enrichment_celltype=CL:0000066!3.23e-29!254;CL:0000223!2.13e-16!59;CL:0002076!4.36e-16!43;CL:0000220!4.19e-12!246;CL:0002321!6.21e-12!248;CL:0002251!8.67e-10!21;CL:0002077!4.98e-09!33 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.64e-13;42!CL:0002251;2.89e-11;20!CL:0002077;4.94e-09;34!CL:0002159;4.61e-08;14!CL:0000622;1.36e-07;5!CL:0000197;9.17e-07;6!CL:0000098;9.17e-07;6!CL:0002167;9.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.26e-18,253;CL:0002076,1.17e-16,42;CL:0000223,2.44e-14,58;CL:0002251,1.21e-11,20;CL:0002077,3.47e-10,34;CL:0002159,5.83e-08,14;CL:0000622,1.19e-07,5;CL:0000197,7.03e-07,6;CL:0000098,7.03e-07,6;CL:0002167,7.03e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;2.67e-08;58 | |||
|ontology_enrichment_disease=DOID:305!2.74e-10!106;DOID:0050687!3.38e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.19e-19!169;UBERON:0000925!1.19e-19!169;UBERON:0006595!1.19e-19!169;UBERON:0001007!3.28e-16!155;UBERON:0001555!3.28e-16!155;UBERON:0007026!3.28e-16!155;UBERON:0004921!2.37e-13!129;UBERON:0004185!2.37e-13!129;UBERON:0001004!3.62e-12!72;UBERON:0000077!9.61e-12!130;UBERON:0000161!9.23e-11!35;UBERON:0001041!6.96e-10!98;UBERON:0000166!1.05e-08!21;UBERON:0003102!3.33e-08!95;UBERON:0003104!4.83e-08!238;UBERON:0009142!4.83e-08!238;UBERON:0000065!1.61e-07!53;UBERON:0000165!1.63e-07!28;UBERON:0000930!1.63e-07!28;UBERON:0000466!2.68e-07!126;UBERON:0000464!3.41e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;1.06e-09;19!UBERON:0000166;1.06e-09;19!UBERON:0000165;5.78e-09;28!UBERON:0001004;2.58e-07;65!UBERON:0005631;2.92e-07;10!UBERON:0000158;2.92e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.60e-14,74;UBERON:0004119,4.08e-13,160;UBERON:0000925,4.08e-13,160;UBERON:0006595,4.08e-13,160;UBERON:0000166,9.84e-13,22;UBERON:0000161,4.00e-12,36;UBERON:0000165,1.06e-09,29;UBERON:0000930,1.06e-09,29;UBERON:0001007,2.40e-09,145;UBERON:0001555,2.40e-09,145;UBERON:0007026,2.40e-09,145;UBERON:0003102,4.44e-08,99;UBERON:0004921,2.04e-07,118;UBERON:0000065,2.38e-07,54;UBERON:0005631,6.23e-07,14;UBERON:0000158,6.23e-07,14 | |||
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| ||
|short_description=p@chr6:138417591..138417635,- | |||
}} | }} |
Latest revision as of 20:06, 30 July 2015
Short description: | p@chr6:138417591..138417635, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:138417591..138417635, - |
Coexpression cluster: | C1043_keratoacanthoma_Prostate_tongue_amniotic_salivary_skin_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.26e-18 | 253 |
endo-epithelial cell | 1.17e-16 | 42 |
endodermal cell | 2.44e-14 | 58 |
epithelial cell of alimentary canal | 1.21e-11 | 20 |
ecto-epithelial cell | 3.47e-10 | 34 |
general ecto-epithelial cell | 5.83e-08 | 14 |
acinar cell | 1.19e-07 | 5 |
receptor cell | 7.03e-07 | 6 |
sensory epithelial cell | 7.03e-07 | 6 |
olfactory epithelial cell | 7.03e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.60e-14 | 74 |
endoderm-derived structure | 4.08e-13 | 160 |
endoderm | 4.08e-13 | 160 |
presumptive endoderm | 4.08e-13 | 160 |
oral opening | 9.84e-13 | 22 |
orifice | 4.00e-12 | 36 |
mouth | 1.06e-09 | 29 |
stomodeum | 1.06e-09 | 29 |
digestive system | 2.40e-09 | 145 |
digestive tract | 2.40e-09 | 145 |
primitive gut | 2.40e-09 | 145 |
surface structure | 4.44e-08 | 99 |
subdivision of digestive tract | 2.04e-07 | 118 |
respiratory tract | 2.38e-07 | 54 |
extraembryonic membrane | 6.23e-07 | 14 |
membranous layer | 6.23e-07 | 14 |