FFCP PHASE1:Hg19::chr6:129930311..129930322,-: Difference between revisions
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|id=chr6:129930311..129930322,-
|short_description=p@chr6:129930311..129930322,-
|description=CAGE_peak_at_chr6:129930311..129930322,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:129930311..129930322,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr6:129930311..129930322,- | |||
|id=chr6:129930311..129930322,- | |||
|ontology_enrichment_celltype=CL:0000163!1.71e-09!9;CL:0000242!7.39e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.68e-99;2!CL:0000242;5.68e-99;2!CL:0000312;1.81e-40;5!CL:0000240;5.98e-34;6!CL:0000311;5.98e-34;6!CL:0000079;5.98e-34;6!CL:0000237;5.98e-34;6!CL:0000362;4.59e-23;9!CL:0002319;2.09e-17;25!CL:0002159;2.95e-15;14!CL:0000095;1.55e-11;17!CL:0000540;1.44e-09;6!CL:0000404;1.44e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.68e-99,2;CL:0000312,1.81e-40,5;CL:0000240,5.98e-34,6;CL:0000311,5.98e-34,6;CL:0000079,5.98e-34,6;CL:0000237,5.98e-34,6;CL:0000036,5.98e-34,6;CL:0000357,5.98e-34,6;CL:0000114,5.98e-34,6;CL:0000362,4.59e-23,9;CL:0002319,2.09e-17,25;CL:0002159,2.95e-15,14;CL:0000095,1.55e-11,17;CL:0000123,1.55e-11,17;CL:0000540,1.44e-09,6;CL:0000031,1.44e-09,6;CL:0000404,1.44e-09,6;CL:0000133,3.25e-08,59;CL:0000047,1.69e-07,8;CL:0000221,6.51e-07,72;CL:0002077,6.75e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;5.98e-34;6!CL:0000114;5.98e-34;6!CL:0000031;1.44e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;2.58e-14;15!UBERON:0007376;2.58e-14;15!UBERON:0001872;3.60e-11;5!UBERON:0010371;3.36e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,2.58e-14,15;UBERON:0007376,2.58e-14,15;UBERON:0007383,2.58e-14,15;UBERON:0001872,3.60e-11,5 | |||
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|short_description=p@chr6:129930311..129930322,- | |||
}} | }} |
Latest revision as of 19:19, 30 July 2015
Short description: | p@chr6:129930311..129930322, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:129930311..129930322, - |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.68e-99 | 2 |
keratinocyte | 1.81e-40 | 5 |
stratified squamous epithelial cell | 5.98e-34 | 6 |
keratin accumulating cell | 5.98e-34 | 6 |
stratified epithelial cell | 5.98e-34 | 6 |
keratinizing barrier epithelial cell | 5.98e-34 | 6 |
epithelial fate stem cell | 5.98e-34 | 6 |
stratified epithelial stem cell | 5.98e-34 | 6 |
surface ectodermal cell | 5.98e-34 | 6 |
epidermal cell | 4.59e-23 | 9 |
neural cell | 2.09e-17 | 25 |
general ecto-epithelial cell | 2.95e-15 | 14 |
neuron associated cell | 1.55e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.55e-11 | 17 |
neuron | 1.44e-09 | 6 |
neuroblast | 1.44e-09 | 6 |
electrically signaling cell | 1.44e-09 | 6 |
neurectodermal cell | 3.25e-08 | 59 |
neuronal stem cell | 1.69e-07 | 8 |
ectodermal cell | 6.51e-07 | 72 |
ecto-epithelial cell | 6.75e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 2.58e-14 | 15 |
outer epithelium | 2.58e-14 | 15 |
enveloping layer of ectoderm | 2.58e-14 | 15 |
parietal lobe | 3.60e-11 | 5 |