FFCP PHASE1:Hg19::chr6:123760865..123760870,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=78bp_to_ENST00000427828,ENST00000434768_5end | |||
|cluster_id=chr6:123760865..123760870,+ | |||
|coexpression_cluster_id=C336 | |||
|description=CAGE_peak_5_at_ENST00000427828_5end,CAGE_peak_5_at_ENST00000434768_5end | |||
|id=chr6:123760865..123760870,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;6.62e-41;1!UBERON:0004140;2.21e-40;1!UBERON:0005062;3.42e-11;4!UBERON:0007284;3.42e-11;4!UBERON:0004872;6.04e-07;7 | |||
|ontology_enrichment_disease=DOID:114!2.01e-40!2;DOID:178!5.16e-21!1;DOID:326!5.16e-21!1;DOID:3978!5.16e-21!1;DOID:3394!5.16e-21!1;DOID:5844!5.16e-21!1;DOID:1287!8.55e-21!4 | |||
|ontology_enrichment_disease_v019=DOID:114;5.69e-21;2!DOID:1287;3.42e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.70e-21,2;DOID:1287,3.42e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.54e-36!27;UBERON:0004151!1.39e-27!3;UBERON:0002084!1.53e-21!1;UBERON:0002082!1.53e-21!1;UBERON:0004706!1.53e-21!1;UBERON:0002146!3.45e-21!1;UBERON:0005623!3.45e-21!1;UBERON:0002079!4.22e-21!1;UBERON:0003103!5.86e-14!69;UBERON:0000948!1.04e-13!24;UBERON:0005498!1.04e-13!24;UBERON:0004140!1.04e-13!24;UBERON:0009881!1.04e-13!24;UBERON:0004141!1.04e-13!24;UBERON:0003084!1.04e-13!24;UBERON:0007005!1.04e-13!24;UBERON:0004139!1.04e-13!24;UBERON:0004291!1.04e-13!24;UBERON:0002081!3.02e-11!2;UBERON:0007023!1.06e-10!115;UBERON:0001009!2.03e-08!113;UBERON:0002300!4.52e-08!3;UBERON:0003978!5.93e-08!3;UBERON:0009751!5.93e-08!3;UBERON:0000946!5.93e-08!3;UBERON:0002523!5.93e-08!3;UBERON:0005983!5.93e-08!3;UBERON:0002165!5.93e-08!3;UBERON:0002062!5.93e-08!3;UBERON:0007280!5.93e-08!3;UBERON:0001896!7.26e-08!3;UBERON:0005290!7.26e-08!3;UBERON:0010096!7.26e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;6.62e-41;1!UBERON:0002082;6.62e-41;1!UBERON:0002146;2.21e-40;1!UBERON:0005623;2.21e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0000948;5.41e-17;22!UBERON:0004151;1.22e-14;3!UBERON:0003978;1.83e-14;3!UBERON:0000946;1.83e-14;3!UBERON:0003103;7.86e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,6.62e-41,1;UBERON:0002082,6.62e-41,1;UBERON:0010226,6.62e-41,1;UBERON:0002146,3.30e-40,1;UBERON:0005623,3.30e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0000948,1.19e-15,24;UBERON:0005498,1.19e-15,24;UBERON:0004140,1.19e-15,24;UBERON:0009881,1.19e-15,24;UBERON:0004141,1.19e-15,24;UBERON:0003084,1.19e-15,24;UBERON:0007005,1.19e-15,24;UBERON:0004139,1.19e-15,24;UBERON:0004291,1.19e-15,24;UBERON:0003103,3.48e-15,68;UBERON:0004151,1.22e-14,3;UBERON:0003978,2.09e-14,3;UBERON:0009751,2.09e-14,3;UBERON:0000946,2.09e-14,3;UBERON:0002523,2.09e-14,3;UBERON:0005983,2.09e-14,3;UBERON:0002165,2.09e-14,3;UBERON:0002062,2.09e-14,3;UBERON:0007280,2.09e-14,3;UBERON:0001009,1.80e-09,112;UBERON:0004797,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60412296808179,0,0.399358000997982,1.71690419254628,3.34757186162809,1.74677028465488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,6.62091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ENST00000427828,p5@ENST00000434768 | |||
}} |
Latest revision as of 19:01, 30 July 2015
Short description: | p5@ENST00000427828, p5@ENST00000434768 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000427828_5end, CAGE_peak_5_at_ENST00000434768_5end |
Coexpression cluster: | C336_left_heart_skeletal_breast_lung_mature_adipose |
Association with transcript: | 78bp_to_ENST00000427828, ENST00000434768_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 6.62e-41 | 1 |
cardiac ventricle | 6.62e-41 | 1 |
future cardiac ventricle | 6.62e-41 | 1 |
pulmonary valve | 3.30e-40 | 1 |
semi-lunar valve | 3.30e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
heart | 1.19e-15 | 24 |
primitive heart tube | 1.19e-15 | 24 |
primary heart field | 1.19e-15 | 24 |
anterior lateral plate mesoderm | 1.19e-15 | 24 |
heart tube | 1.19e-15 | 24 |
heart primordium | 1.19e-15 | 24 |
cardiac mesoderm | 1.19e-15 | 24 |
cardiogenic plate | 1.19e-15 | 24 |
heart rudiment | 1.19e-15 | 24 |
compound organ | 3.48e-15 | 68 |
cardiac chamber | 1.22e-14 | 3 |
valve | 2.09e-14 | 3 |
cardiac mesenchyme | 2.09e-14 | 3 |
cardial valve | 2.09e-14 | 3 |
tunica intima | 2.09e-14 | 3 |
heart layer | 2.09e-14 | 3 |
endocardium | 2.09e-14 | 3 |
endocardial cushion | 2.09e-14 | 3 |
presumptive endocardium | 2.09e-14 | 3 |
circulatory system | 1.80e-09 | 112 |
blood vessel layer | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.70e-21 | 2 |
cardiovascular system disease | 3.42e-11 | 4 |