FFCP PHASE1:Hg19::chr6:12332214..12332242,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:12332214..12332242,- | |||
|description=CAGE_peak_at_chr6:12332214..12332242,- | |description=CAGE_peak_at_chr6:12332214..12332242,- | ||
|id=chr6:12332214..12332242,- | |id=chr6:12332214..12332242,- | ||
|ontology_enrichment_celltype=CL:0000322!4.30e-16!3;CL:0000223!3.77e-11!59;CL:0000181!9.77e-09!12;CL:0000417!9.77e-09!12;CL:0000668!9.77e-09!12;CL:0000414!9.77e-09!12;CL:0000412!9.77e-09!12;CL:0000182!9.77e-09!12;CL:0002368!1.84e-08!13;CL:0002253!6.80e-07!2 | |ontology_enrichment_celltype=CL:0000322!4.30e-16!3;CL:0000223!3.77e-11!59;CL:0000181!9.77e-09!12;CL:0000417!9.77e-09!12;CL:0000668!9.77e-09!12;CL:0000414!9.77e-09!12;CL:0000412!9.77e-09!12;CL:0000182!9.77e-09!12;CL:0002368!1.84e-08!13;CL:0002253!6.80e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000322;3.66e-23;3!CL:0002368;2.28e-21;13!CL:0002202;1.16e-08;9!CL:0002632;1.16e-08;9!CL:0002076;2.46e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.27e-23,3;CL:0002368,2.16e-21,13;CL:0002202,1.12e-08,9;CL:0002632,1.12e-08,9;CL:0002076,2.04e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!4.35e-26!4;DOID:1612!4.35e-26!4;DOID:7!2.62e-13!39;DOID:3910!6.42e-07!2 | |ontology_enrichment_disease=DOID:5093!4.35e-26!4;DOID:1612!4.35e-26!4;DOID:7!2.62e-13!39;DOID:3910!6.42e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:5093;9.45e-18;4!DOID:1612;9.45e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.03e-17,4;DOID:1612,1.03e-17,4 | |||
|ontology_enrichment_uberon=UBERON:0004821!4.30e-16!3;UBERON:0003215!4.30e-16!3;UBERON:0002299!4.30e-16!3;UBERON:0006524!4.30e-16!3;UBERON:0008874!4.30e-16!3;UBERON:0002169!4.30e-16!3;UBERON:0004894!4.30e-16!3;UBERON:0002372!4.81e-12!1;UBERON:0001961!4.81e-12!1;UBERON:0001744!4.81e-12!1;UBERON:0001735!4.81e-12!1;UBERON:0007499!5.50e-11!25;UBERON:0000310!8.36e-11!10;UBERON:0009856!1.47e-10!26;UBERON:0009569!2.28e-10!113;UBERON:0001443!7.18e-10!11;UBERON:0005911!8.16e-10!82;UBERON:0000060!4.83e-09!12;UBERON:0004119!1.20e-07!169;UBERON:0000925!1.20e-07!169;UBERON:0006595!1.20e-07!169;UBERON:0009497!3.19e-07!25;UBERON:0000015!3.19e-07!25;UBERON:0002423!3.19e-07!25;UBERON:0006235!3.19e-07!25;UBERON:0004161!3.19e-07!25;UBERON:0000077!4.15e-07!130;UBERON:0003929!6.20e-07!54;UBERON:0004903!6.42e-07!2;UBERON:0002173!6.42e-07!2;UBERON:0002186!6.42e-07!2;UBERON:0005172!8.62e-07!55;UBERON:0005173!8.62e-07!55 | |ontology_enrichment_uberon=UBERON:0004821!4.30e-16!3;UBERON:0003215!4.30e-16!3;UBERON:0002299!4.30e-16!3;UBERON:0006524!4.30e-16!3;UBERON:0008874!4.30e-16!3;UBERON:0002169!4.30e-16!3;UBERON:0004894!4.30e-16!3;UBERON:0002372!4.81e-12!1;UBERON:0001961!4.81e-12!1;UBERON:0001744!4.81e-12!1;UBERON:0001735!4.81e-12!1;UBERON:0007499!5.50e-11!25;UBERON:0000310!8.36e-11!10;UBERON:0009856!1.47e-10!26;UBERON:0009569!2.28e-10!113;UBERON:0001443!7.18e-10!11;UBERON:0005911!8.16e-10!82;UBERON:0000060!4.83e-09!12;UBERON:0004119!1.20e-07!169;UBERON:0000925!1.20e-07!169;UBERON:0006595!1.20e-07!169;UBERON:0009497!3.19e-07!25;UBERON:0000015!3.19e-07!25;UBERON:0002423!3.19e-07!25;UBERON:0006235!3.19e-07!25;UBERON:0004161!3.19e-07!25;UBERON:0000077!4.15e-07!130;UBERON:0003929!6.20e-07!54;UBERON:0004903!6.42e-07!2;UBERON:0002173!6.42e-07!2;UBERON:0002186!6.42e-07!2;UBERON:0005172!8.62e-07!55;UBERON:0005173!8.62e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0004821;3.66e-23;3!UBERON:0007499;3.66e-23;3!UBERON:0003215;3.66e-23;3!UBERON:0010368;3.66e-23;3!UBERON:0009911;3.66e-23;3!UBERON:0002299;3.66e-23;3!UBERON:0006524;3.66e-23;3!UBERON:0008874;3.66e-23;3!UBERON:0002169;3.66e-23;3!UBERON:0004894;3.66e-23;3!UBERON:0009856;9.45e-18;4!UBERON:0000310;6.34e-08;10!UBERON:0001443;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004821,3.27e-23,3;UBERON:0003215,3.27e-23,3;UBERON:0010368,3.27e-23,3;UBERON:0009911,3.27e-23,3;UBERON:0002299,3.27e-23,3;UBERON:0006524,3.27e-23,3;UBERON:0008874,3.27e-23,3;UBERON:0002169,3.27e-23,3;UBERON:0004894,3.27e-23,3;UBERON:0000310,6.56e-08,10;UBERON:0001443,2.63e-07,11 | |||
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|short_description=p@chr6:12332214..12332242,- | |short_description=p@chr6:12332214..12332242,- | ||
}} | }} |
Latest revision as of 19:00, 30 July 2015
Short description: | p@chr6:12332214..12332242, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:12332214..12332242, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.27e-23 | 3 |
respiratory epithelial cell | 2.16e-21 | 13 |
epithelial cell of tracheobronchial tree | 1.12e-08 | 9 |
epithelial cell of lower respiratory tract | 1.12e-08 | 9 |
endo-epithelial cell | 2.04e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
pulmonary alveolus epithelium | 3.27e-23 | 3 |
alveolus | 3.27e-23 | 3 |
pulmonary lobule | 3.27e-23 | 3 |
lobule | 3.27e-23 | 3 |
alveolus of lung | 3.27e-23 | 3 |
alveolar system | 3.27e-23 | 3 |
pulmonary acinus | 3.27e-23 | 3 |
alveolar sac | 3.27e-23 | 3 |
alveolar wall | 3.27e-23 | 3 |
breast | 6.56e-08 | 10 |
chest | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.03e-17 | 4 |
breast cancer | 1.03e-17 | 4 |