FFCP PHASE1:Hg19::chr5:964244..964279,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:964244..964279,- | |||
|description=CAGE_peak_at_chr5:964244..964279,- | |description=CAGE_peak_at_chr5:964244..964279,- | ||
|id=chr5:964244..964279,- | |id=chr5:964244..964279,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.78e-13;1!CL:0000911;2.78e-13;1!CL:0000814;2.78e-13;1!CL:0002554;4.42e-07;2!CL:0002363;4.42e-07;2!CL:0002583;4.42e-07;2 | |ontology_enrichment_celltype_v019=CL:0002127;2.78e-13;1!CL:0000911;2.78e-13;1!CL:0000814;2.78e-13;1!CL:0002554;4.42e-07;2!CL:0002363;4.42e-07;2!CL:0002583;4.42e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.32e-13,1;CL:0000914,2.32e-13,1;CL:0000911,2.32e-13,1;CL:0000814,2.32e-13,1;CL:0002042,2.32e-13,1;CL:0002039,2.32e-13,1;CL:0002040,2.32e-13,1;CL:0002041,2.32e-13,1;CL:0000893,2.58e-07,2;CL:0002489,2.58e-07,2;CL:0000809,2.58e-07,2;CL:0000808,2.58e-07,2;CL:0000894,2.58e-07,2;CL:0000806,2.58e-07,2;CL:0000807,2.58e-07,2;CL:0000805,2.58e-07,2;CL:0002425,2.58e-07,2;CL:0002554,3.48e-07,2;CL:0002583,4.42e-07,2;CL:0002363,4.98e-07,2;CL:0000008,4.98e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;2.82e-07;2!CL:0000008;4.42e-07;2 | |ontology_enrichment_development_v019=CL:0002425;2.82e-07;2!CL:0000008;4.42e-07;2 | ||
|ontology_enrichment_disease=DOID:1240!6.77e-20!39;DOID:2531!1.05e-16!51;DOID:0060083!1.05e-16!51;DOID:8692!4.44e-15!31 | |ontology_enrichment_disease=DOID:1240!6.77e-20!39;DOID:2531!1.05e-16!51;DOID:0060083!1.05e-16!51;DOID:8692!4.44e-15!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.31e-18;39!DOID:2531;3.74e-15;51!DOID:0060083;3.74e-15;51!DOID:8692;4.51e-13;31!DOID:3193;4.42e-07;2!DOID:962;4.42e-07;2 | |ontology_enrichment_disease_v019=DOID:1240;3.31e-18;39!DOID:2531;3.74e-15;51!DOID:0060083;3.74e-15;51!DOID:8692;4.51e-13;31!DOID:3193;4.42e-07;2!DOID:962;4.42e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,1.77e-23,39;DOID:2531,7.19e-22,51;DOID:0060083,7.19e-22,51;DOID:8692,1.89e-13,31;DOID:0050686,7.15e-09,137;DOID:3193,4.69e-07,2;DOID:962,4.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.57e-09!7;UBERON:0002370!5.94e-08!4;UBERON:0005058!5.94e-08!4;UBERON:0009113!5.94e-08!4;UBERON:0003295!5.94e-08!4;UBERON:0005562!5.94e-08!4 | |ontology_enrichment_uberon=UBERON:0004177!6.57e-09!7;UBERON:0002370!5.94e-08!4;UBERON:0005058!5.94e-08!4;UBERON:0009113!5.94e-08!4;UBERON:0003295!5.94e-08!4;UBERON:0005562!5.94e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;4.42e-07;2!UBERON:0003566;4.42e-07;2!UBERON:0001777;4.42e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003714;4.42e-07;2!UBERON:0003566;4.42e-07;2!UBERON:0001777;4.42e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,4.69e-07,2;UBERON:0003566,4.98e-07,2;UBERON:0001777,4.98e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19093027116212,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0,0,0,0.520237390239513,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.339928028092699,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,1.82032272387605,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.771048469013278,1.24293207719189,0,1.03850885836724,0.697262270759755,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.537101224341368,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577076851905779,2.84567373393656,0.797131363644112,0,0,2.32840940996271,0.324621940274555,1.40398589056729,5.70586697582981,0,2.50634477090067,0,1.76646882614069,0.201799707191048,0.425846237690326,0.687010689511529,0.614481528616916,0,0.166849141711909,0.19538809540204,0,0,0.540911356951966,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,4.09257896181497,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549585560411174,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0.216388639742091,0,0,0,0.593042257361244,0.370691816839509,0.313265848516366,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0.106787412567695,0.943225830597996,0,0.496166021811951,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,0,0,0,0,0,0.302461847526478,0.466311601748341,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0.0788617450012534,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0.436350690340377,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.710478008196067,0.186224142887574,0.224263725161227,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19093027116212,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0,0,0,0.520237390239513,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.339928028092699,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,1.82032272387605,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.771048469013278,1.24293207719189,0,1.03850885836724,0.697262270759755,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.537101224341368,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577076851905779,2.84567373393656,0.797131363644112,0,0,2.32840940996271,0.324621940274555,1.40398589056729,5.70586697582981,0,2.50634477090067,0,1.76646882614069,0.201799707191048,0.425846237690326,0.687010689511529,0.614481528616916,0,0.166849141711909,0.19538809540204,0,0,0.540911356951966,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,4.09257896181497,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549585560411174,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0.216388639742091,0,0,0,0.593042257361244,0.370691816839509,0.313265848516366,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0.106787412567695,0.943225830597996,0,0.496166021811951,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,0,0,0,0,0,0.302461847526478,0.466311601748341,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0.0788617450012534,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0.436350690340377,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.710478008196067,0.186224142887574,0.224263725161227,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:964244..964279,- | |short_description=p@chr5:964244..964279,- | ||
}} | }} |
Latest revision as of 17:35, 30 July 2015
Short description: | p@chr5:964244..964279, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:964244..964279, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.32e-13 | 1 |
immature NK T cell | 2.32e-13 | 1 |
effector T cell | 2.32e-13 | 1 |
mature NK T cell | 2.32e-13 | 1 |
immature NK T cell stage IV | 2.32e-13 | 1 |
immature NK T cell stage I | 2.32e-13 | 1 |
immature NK T cell stage II | 2.32e-13 | 1 |
immature NK T cell stage III | 2.32e-13 | 1 |
thymocyte | 2.58e-07 | 2 |
double negative thymocyte | 2.58e-07 | 2 |
double-positive, alpha-beta thymocyte | 2.58e-07 | 2 |
DN4 thymocyte | 2.58e-07 | 2 |
DN1 thymic pro-T cell | 2.58e-07 | 2 |
DN2 thymocyte | 2.58e-07 | 2 |
DN3 thymocyte | 2.58e-07 | 2 |
immature single positive thymocyte | 2.58e-07 | 2 |
early T lineage precursor | 2.58e-07 | 2 |
fibroblast of lymphatic vessel | 3.48e-07 | 2 |
subcutaneous preadipocyte | 4.42e-07 | 2 |
keratocyte | 4.98e-07 | 2 |
migratory cranial neural crest cell | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.69e-07 | 2 |
head connective tissue | 4.98e-07 | 2 |
substantia propria of cornea | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.77e-23 | 39 |
hematologic cancer | 7.19e-22 | 51 |
immune system cancer | 7.19e-22 | 51 |
myeloid leukemia | 1.89e-13 | 31 |
organ system cancer | 7.15e-09 | 137 |
peripheral nerve sheath neoplasm | 4.69e-07 | 2 |
neurofibroma | 4.69e-07 | 2 |