FFCP PHASE1:Hg19::chr5:82836231..82836261,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:82836231..82836261,+ | |||
|coexpression_cluster_id=C456 | |||
|description=CAGE_peak_at_chr5:82836231..82836261,+ | |||
|id=chr5:82836231..82836261,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.77e-18!42;CL:0000860!1.85e-15!45;CL:0000055!3.26e-12!180;CL:0000048!5.15e-11!430;CL:0000034!6.86e-11!444;CL:0000723!1.88e-10!436;CL:0000393!9.17e-10!60;CL:0000211!9.17e-10!60;CL:0000187!1.82e-09!54;CL:0000680!3.20e-09!57;CL:0000056!3.20e-09!57;CL:0000355!3.20e-09!57;CL:0000057!2.08e-08!75;CL:0002194!4.67e-08!63;CL:0000576!4.67e-08!63;CL:0000040!4.67e-08!63;CL:0000559!4.67e-08!63;CL:0000183!1.94e-07!59;CL:0002009!2.31e-07!65;CL:0000192!2.35e-07!42;CL:0000514!2.35e-07!42;CL:0000359!3.94e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-19;33!CL:0002057;1.16e-19;33!CL:0000473;4.45e-13;39!CL:0000234;4.45e-13;39!CL:0000576;2.94e-10;48!CL:0002334;1.70e-08;12!CL:0000134;1.23e-07;55!CL:0002570;5.89e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.24e-20,42;CL:0002057,5.24e-20,42;CL:0000473,3.57e-16,48;CL:0000234,3.57e-16,48;CL:0000048,4.93e-15,427;CL:0000723,2.53e-14,433;CL:0000034,2.86e-14,441;CL:0000134,3.07e-11,354;CL:0002194,5.96e-11,59;CL:0000576,5.96e-11,59;CL:0000040,5.96e-11,59;CL:0000559,5.96e-11,59;CL:0002320,6.59e-11,361;CL:0002009,2.70e-10,61;CL:0000219,6.89e-09,386;CL:0000839,7.50e-09,66;CL:0000557,1.36e-08,67;CL:0002334,2.91e-08,12;CL:0000766,2.04e-07,72;CL:0002570,9.10e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.80e-15;42 | |||
|ontology_enrichment_disease=DOID:2394!2.70e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.10e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.08e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!8.39e-13!167;UBERON:0000468!3.37e-11!659;UBERON:0000467!7.42e-09!625;UBERON:0000480!1.04e-08!626;UBERON:0001134!1.45e-08!61;UBERON:0002036!1.45e-08!61;UBERON:0003082!1.45e-08!61;UBERON:0003081!6.54e-08!216;UBERON:0000948!7.19e-08!24;UBERON:0005498!7.19e-08!24;UBERON:0004140!7.19e-08!24;UBERON:0009881!7.19e-08!24;UBERON:0004141!7.19e-08!24;UBERON:0003084!7.19e-08!24;UBERON:0007005!7.19e-08!24;UBERON:0004139!7.19e-08!24;UBERON:0004291!7.19e-08!24;UBERON:0002385!8.16e-08!63;UBERON:0001015!8.16e-08!63;UBERON:0000383!8.16e-08!63;UBERON:0000914!1.02e-07!83;UBERON:0002329!1.02e-07!83;UBERON:0003077!1.02e-07!83;UBERON:0003059!1.02e-07!83;UBERON:0007282!1.02e-07!83;UBERON:0009618!1.02e-07!83;UBERON:0007285!1.02e-07!83;UBERON:0004535!1.96e-07!110;UBERON:0000922!2.09e-07!612;UBERON:0004290!2.97e-07!70;UBERON:0004872!3.70e-07!84;UBERON:0001009!5.34e-07!113;UBERON:0000926!9.62e-07!448;UBERON:0004120!9.62e-07!448;UBERON:0006603!9.62e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.64e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.08e-12,315;UBERON:0004120,8.08e-12,315;UBERON:0006603,8.08e-12,315;UBERON:0003081,7.11e-11,203;UBERON:0002384,7.42e-11,371;UBERON:0002204,3.65e-09,167;UBERON:0002371,7.69e-08,76;UBERON:0001474,3.09e-07,82;UBERON:0002390,3.50e-07,98;UBERON:0003061,3.50e-07,98;UBERON:0001013,5.50e-07,14 | |||
|phase1_expression=1.45342703416445,3.8538094300377,0.704772020479856,4.00293193412522,1.78784437770915,6.10636966870258,2.53299878168311,0.631719873426831,2.08948502559871,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,3.41552959153355,0.123121058076788,0,0.626909442956176,0.286235987131057,1.23186982565596,0.87879847716362,0,0,0,0,0.767658796194425,0.619264493264304,0,0,0,0,0,0,2.21598163412751,4.61252229181326,6.07630438004385,0,0,0,4.50734540216651,1.88937971844405,0.485168122375632,5.81072592264212,2.87817521615278,1.23882548358041,7.19230980805376,2.56160706529101,1.41889337933151,6.55016793399575,3.87290810150296,0,6.96496656307637,2.18324920046277,1.57306439111559,6.73384563215986,0.320929027076094,2.55734850319616,3.95821560224059,2.19410023383795,0.852449501065388,6.67481248845743,2.26954089876456,1.24564449799115,11.3061899365534,2.60741459210101,1.3031330682307,3.63239701580021,1.47311054395026,0.949387162322653,0.422510572623884,0.850417199860174,0.838634582033504,2.02191536063691,3.45406853535464,2.4108838004562,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.68280343881454,0.255725123687061,1.80719576192283,1.00267582127178,2.02785126545153,0,0.486634870302636,1.13441780596881,3.54767035940102,2.3715392137144,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,2.40597972162702,4.76673050927588,16.92336062418,3.90135220418193,2.80338800071154,1.06748995729705,0.98667019366864,0.622422070799533,0.67355336034844,1.14423332179421,0,1.15235184896,0.234321431833797,0,0,0,0.117434498643765,0.485618833104395,0.140450806702248,0,0.368502951935304,0.206651562351531,0,0.989067717114227,0,0,0.168336113954066,0.625592599359821,0,0.438977620880838,0.30648779579902,1.05166641234618,0.794025282120147,4.30535125653269,1.2813443329114,0.847727604638247,1.50045548042201,0.618315175430633,3.34932702059318,0,1.0126579934476,0.974370051611986,3.02920529092937,0.368199594569197,0.161646056818812,4.26011511019937,0.604512589365842,0.169560592310488,0,0,0,0.975789649036763,0.662648841607426,0.580969714347592,1.14027160516907,1.00928340350251,1.45990943630332,0,1.92972281457866,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.185176890317059,0,0,1.44331342025273,0,2.58299127318808,0,0,0,0,0,0,0,0.148631162288728,0,0.671928512795438,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,2.06834745212444,3.57656445851882,2.535908257668,1.32969058292435,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,1.58390374586686,0,0.871533458600294,0.299918973546171,0,0,0,1.19812427745791,0,0,0.434343920002738,0,0.358121926479791,0,0,0,0.256686072559497,0,0,0,0.335032530668698,0,0,0,0,0.613457458595699,1.50051156317903,0,1.45579603071565,2.14114786556594,1.10391690523754,1.7571212248907,0.300946099727719,0,0,0,0,0.347534457872331,0,0,1.24060815673732,1.72571360654893,2.13455115606889,0,0,0,3.72161711728165,3.37616341233737,4.77122160536225,1.28139149255701,2.04682899626681,12.0640440857706,0,1.07946785661859,3.01854933032316,0.821271560138091,3.63478100428535,1.27831416305955,0.241718899183244,0.802025881213139,0.184161977871793,0.574072240823034,0.546273504020151,0,0,0.462092022626489,0,0,1.47772280450026,0,0,1.0795795805107,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,6.42735719376638,0.48335359146061,0.308097234229289,0.460511024178389,0.551346289938122,1.18162269355101,0.870100163485371,0.852266274161009,1.51354460599453,0.661139661443912,0,0.255225424989168,0.10115778085555,1.39453664789186,12.9073062200562,0.6970372701606,0.924100740528266,1.06461206063404,1.73986598415015,1.48259375283136,0.143124886741991,0,0.316379424718726,0.762520775695299,0,0,0.95460974377781,2.35484592059769,1.61885211824983,1.64722217841633,1.41374882814824,0.606547444719948,3.17020642346017,0,0,1.94970791705028,1.05650146756755,0.272999822815972,0.848432591722276,3.39024349860728,1.10273068709225,0,1.31535265576129,0.578775534266688,0.655894752046633,0.608731130888112,0.6196469961995,0.563391205064483,1.00387946542836,0,0.35667105148125,0,1.47775344708365,4.28083360847872,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0.822724546172388,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.422008249231538,0.333926115068718,1.48323486804084,0,0.597743964753209,0.276283915531148,0,0,0,3.11039587661807,0.0898683511473268,0.179021174675609,0,0.394573622547734,4.7896618469388,0,0,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0,0,2.2571249341328,0,0.12059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| |||
|short_description=p@chr5:82836231..82836261,+ | |||
}} |
Latest revision as of 16:56, 30 July 2015
Short description: | p@chr5:82836231..82836261, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:82836231..82836261, + |
Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.24e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.24e-20 | 42 |
defensive cell | 3.57e-16 | 48 |
phagocyte | 3.57e-16 | 48 |
multi fate stem cell | 4.93e-15 | 427 |
somatic stem cell | 2.53e-14 | 433 |
stem cell | 2.86e-14 | 441 |
mesenchymal cell | 3.07e-11 | 354 |
monopoietic cell | 5.96e-11 | 59 |
monocyte | 5.96e-11 | 59 |
monoblast | 5.96e-11 | 59 |
promonocyte | 5.96e-11 | 59 |
connective tissue cell | 6.59e-11 | 361 |
macrophage dendritic cell progenitor | 2.70e-10 | 61 |
motile cell | 6.89e-09 | 386 |
myeloid lineage restricted progenitor cell | 7.50e-09 | 66 |
granulocyte monocyte progenitor cell | 1.36e-08 | 67 |
preadipocyte | 2.91e-08 | 12 |
myeloid leukocyte | 2.04e-07 | 72 |
mesenchymal stem cell of adipose | 9.10e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.08e-12 | 315 |
mesoderm-derived structure | 8.08e-12 | 315 |
presumptive mesoderm | 8.08e-12 | 315 |
lateral plate mesoderm | 7.11e-11 | 203 |
connective tissue | 7.42e-11 | 371 |
musculoskeletal system | 3.65e-09 | 167 |
bone marrow | 7.69e-08 | 76 |
bone element | 3.09e-07 | 82 |
hematopoietic system | 3.50e-07 | 98 |
blood island | 3.50e-07 | 98 |
adipose tissue | 5.50e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.08e-12 | 14 |