FFCP PHASE1:Hg19::chr5:82835837..82835870,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:82835837..82835870,+
|short_description=p@chr5:82835837..82835870,+
|description=CAGE_peak_at_chr5:82835837..82835870,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:82835837..82835870,+ | |||
|coexpression_cluster_id=C456 | |||
|description=CAGE_peak_at_chr5:82835837..82835870,+ | |||
|id=chr5:82835837..82835870,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.86e-22!42;CL:0000860!1.84e-19!45;CL:0000034!7.52e-13!444;CL:0000048!1.03e-12!430;CL:0000723!1.75e-12!436;CL:0000055!3.22e-11!180;CL:0002194!8.82e-11!63;CL:0000576!8.82e-11!63;CL:0000040!8.82e-11!63;CL:0000559!8.82e-11!63;CL:0002009!6.01e-10!65;CL:0002334!6.09e-09!12;CL:0000057!1.81e-08!75;CL:0000393!2.43e-08!60;CL:0000211!2.43e-08!60;CL:0000839!3.94e-08!70;CL:0000557!8.27e-08!71;CL:0000766!8.57e-08!76;CL:0000187!2.07e-07!54;CL:0000680!3.44e-07!57;CL:0000056!3.44e-07!57;CL:0000355!3.44e-07!57;CL:0002320!8.95e-07!365;CL:0002494!9.94e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.08e-24;33!CL:0002057;2.08e-24;33!CL:0000473;4.21e-18;39!CL:0000234;4.21e-18;39!CL:0002334;2.77e-13;12!CL:0000576;5.68e-13;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.30e-24,42;CL:0002057,6.30e-24,42;CL:0000473,3.90e-21,48;CL:0000234,3.90e-21,48;CL:0000048,1.71e-17,427;CL:0000723,9.81e-17,433;CL:0000034,1.00e-16,441;CL:0002194,1.22e-14,59;CL:0000576,1.22e-14,59;CL:0000040,1.22e-14,59;CL:0000559,1.22e-14,59;CL:0002009,8.08e-14,61;CL:0002334,1.70e-13,12;CL:0000134,2.77e-13,354;CL:0002320,5.45e-13,361;CL:0000839,5.31e-12,66;CL:0000557,1.13e-11,67;CL:0000219,8.38e-11,386;CL:0000057,3.47e-10,76;CL:0000766,3.49e-10,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-17;42 | |||
|ontology_enrichment_disease=DOID:2394!7.84e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.50e-14;14!DOID:193;1.61e-07;29!DOID:120;2.87e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.15e-13,14;DOID:193,2.40e-07,29;DOID:120,4.04e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.00e-13!167;UBERON:0000468!1.66e-09!659;UBERON:0003081!6.35e-09!216;UBERON:0000948!1.43e-08!24;UBERON:0005498!1.43e-08!24;UBERON:0004140!1.43e-08!24;UBERON:0009881!1.43e-08!24;UBERON:0004141!1.43e-08!24;UBERON:0003084!1.43e-08!24;UBERON:0007005!1.43e-08!24;UBERON:0004139!1.43e-08!24;UBERON:0004291!1.43e-08!24;UBERON:0001134!3.34e-08!61;UBERON:0002036!3.34e-08!61;UBERON:0003082!3.34e-08!61;UBERON:0002385!1.66e-07!63;UBERON:0001015!1.66e-07!63;UBERON:0000383!1.66e-07!63;UBERON:0007100!2.63e-07!27;UBERON:0002384!3.72e-07!375;UBERON:0000926!4.59e-07!448;UBERON:0004120!4.59e-07!448;UBERON:0006603!4.59e-07!448;UBERON:0004573!6.30e-07!33;UBERON:0004571!6.30e-07!33;UBERON:0002371!7.37e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.33e-08;9!UBERON:0000042;2.33e-08;9!UBERON:0003688;1.58e-07;6!UBERON:0002358;1.58e-07;6!UBERON:0003684;1.58e-07;6!UBERON:0001178;1.58e-07;6!UBERON:0000992;5.69e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,9.37e-15,315;UBERON:0004120,9.37e-15,315;UBERON:0006603,9.37e-15,315;UBERON:0002384,6.53e-13,371;UBERON:0002204,1.20e-11,167;UBERON:0003081,1.09e-10,203;UBERON:0002371,1.23e-10,76;UBERON:0001474,8.78e-10,82;UBERON:0004765,1.03e-08,90;UBERON:0002390,3.45e-08,98;UBERON:0003061,3.45e-08,98;UBERON:0001434,3.61e-08,100;UBERON:0003688,1.19e-07,6;UBERON:0002358,1.19e-07,6;UBERON:0003684,1.19e-07,6;UBERON:0001178,1.19e-07,6;UBERON:0002405,6.02e-07,93;UBERON:0000992,7.58e-07,13 | |||
|phase1_expression=2.54349730978779,4.06790995392868,3.94672331468719,2.00146596706261,1.78784437770915,1.74467704820074,0,1.26343974685366,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,4.70627602516243,1.20538905604795,2.19093027116212,0.975865597581014,0.123121058076788,0.204000691244253,0,0.286235987131057,1.77936752594749,0.753255837568817,0,0,0,0.786728553697808,0.767658796194425,0.619264493264304,0,0,0,0,0,0,1.66198622559563,4.21143339687298,2.38711957787437,0,0,0,6.68831898385998,0.755751887377619,1.94067248950253,10.6917356976615,2.05583944010913,2.47765096716083,10.9323109082417,3.84241059793651,0.945928919554341,12.4108445065183,7.74581620300591,2.70852973188684,11.6710250516415,2.72906150057846,0.898893937780338,9.18251677112708,2.24650318953266,4.47535988059329,7.25672860410775,3.19141852194611,1.27867425159808,14.2202526928006,3.40431134814684,1.86846674698672,11.0549412712967,6.25779502104242,1.95469960234605,10.2917915447673,1.10483290796269,0.949387162322653,0.211255286311942,0.637812899895131,0.838634582033504,3.36985893439485,2.85336096398862,4.33959084082116,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,2.1686349143074,1.00267582127178,0.869079113764942,0.795285947051099,0.486634870302636,0.567208902984407,0.443458794925128,1.31752178539689,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,2.91250176828533,4.8991396900891,14.3418310374407,6.02936249737207,1.68203280042692,1.06748995729705,1.2333377420858,1.55605517699883,1.34710672069688,0.326923806226917,0,0.576175924479999,0,0,0,0,0.352303495931295,0.323745888736263,0,0,0.245668634623536,0,1.18800285728205,2.47266929278557,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0.453728732640084,3.04962380671065,1.70845911054854,0.423863802319124,1.50045548042201,0.618315175430633,2.06112432036503,0.930584281657949,3.54430297706659,1.36411807225678,2.27190396819703,0.552299391853796,0.484938170456436,3.19508633264953,0.705264687593482,0.169560592310488,0,0,0,0.121973706129595,0.265059536642971,0.69716365721711,1.0366105501537,1.26160425437814,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0,3.40485213283883,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,4.26596662000667,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.499864955910285,0,0,4.21667878966063,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0,0.394061520403854,0,0.128343036279748,0.508189248444927,1.30139853857622,0,0.167516265334349,1.27587750330633,0,0,0,0.613457458595699,2.50085260529839,0.542530047399471,2.9115920614313,2.67643483195743,1.10391690523754,2.81139395982512,0,0,0,0.664225598535437,0,0.260650843404249,0,0,1.24060815673732,2.37285620900479,1.06727557803444,0,1.66435439510497,0,4.21783273291921,6.1384789315225,5.05188169979532,5.38184426873944,2.55853624533352,8.84696566289841,2.96836132889982,1.69630663182921,2.13074070375753,1.31403449622095,4.67328986265259,1.74315567689939,0,1.80455823272956,0,0.68888668898764,0.546273504020151,0.262248829918848,0,0.616122696835318,0,0,1.26661954671451,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,1.6068392984416,1.06337790121334,0.924291702687866,0.767518373630648,0.137836572484531,1.18162269355101,0.870100163485371,0.681813019328807,1.51354460599453,0.495854746082934,0.576570202095319,1.27612712494584,0.30347334256665,0.464845549297286,13.8517432605482,2.0911118104818,0.616067160352178,1.06461206063404,0,1.29726953372744,0.286249773483982,0,0.949138274156178,0,0,0,0.636406495851874,1.56989728039846,1.07923474549989,2.47083326762449,0.942499218765491,0.202182481573316,1.58510321173008,0.421258456238981,0,1.94970791705028,0,0.136499911407986,1.69686518344455,4.52032466480971,1.10273068709225,2.65375590096488,1.31535265576129,0,0,0.202910376962704,0.92947049429925,0,0.143411352204052,0,0,0.354761064070598,2.32218398827431,6.91519275215794,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.422008249231538,0.890469640183247,1.15362711958732,0,0.796991953004279,0,0,0,0,2.48831670129446,0.179736702294654,0,0,0.394573622547734,0,0,0,0.463840490809256,0,0,0,0,0,0.254253650292766,0,0,0,1.73624994933292,0,0.120596438625408,0,0,0,0,0,0,0.384751292518985,0.683652335082007,0,0,0,0.31900115973192,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0,0,0,0.202203398942031,1.60515529459758,0.46852889145067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| ||
|short_description=p@chr5:82835837..82835870,+ | |||
}} | }} |
Latest revision as of 16:56, 30 July 2015
Short description: | p@chr5:82835837..82835870, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:82835837..82835870, + |
Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.30e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.30e-24 | 42 |
defensive cell | 3.90e-21 | 48 |
phagocyte | 3.90e-21 | 48 |
multi fate stem cell | 1.71e-17 | 427 |
somatic stem cell | 9.81e-17 | 433 |
stem cell | 1.00e-16 | 441 |
monopoietic cell | 1.22e-14 | 59 |
monocyte | 1.22e-14 | 59 |
monoblast | 1.22e-14 | 59 |
promonocyte | 1.22e-14 | 59 |
macrophage dendritic cell progenitor | 8.08e-14 | 61 |
preadipocyte | 1.70e-13 | 12 |
mesenchymal cell | 2.77e-13 | 354 |
connective tissue cell | 5.45e-13 | 361 |
myeloid lineage restricted progenitor cell | 5.31e-12 | 66 |
granulocyte monocyte progenitor cell | 1.13e-11 | 67 |
motile cell | 8.38e-11 | 386 |
fibroblast | 3.47e-10 | 76 |
myeloid leukocyte | 3.49e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 9.37e-15 | 315 |
mesoderm-derived structure | 9.37e-15 | 315 |
presumptive mesoderm | 9.37e-15 | 315 |
connective tissue | 6.53e-13 | 371 |
musculoskeletal system | 1.20e-11 | 167 |
lateral plate mesoderm | 1.09e-10 | 203 |
bone marrow | 1.23e-10 | 76 |
bone element | 8.78e-10 | 82 |
skeletal element | 1.03e-08 | 90 |
hematopoietic system | 3.45e-08 | 98 |
blood island | 3.45e-08 | 98 |
skeletal system | 3.61e-08 | 100 |
omentum | 1.19e-07 | 6 |
peritoneum | 1.19e-07 | 6 |
abdominal cavity | 1.19e-07 | 6 |
visceral peritoneum | 1.19e-07 | 6 |
immune system | 6.02e-07 | 93 |
female gonad | 7.58e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.15e-13 | 14 |
reproductive organ cancer | 2.40e-07 | 29 |
female reproductive organ cancer | 4.04e-07 | 27 |