FFCP PHASE1:Hg19::chr5:82834843..82834902,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:82834843..82834902,+ | |||
|coexpression_cluster_id=C456 | |coexpression_cluster_id=C456 | ||
|description=CAGE_peak_at_chr5:82834843..82834902,+ | |description=CAGE_peak_at_chr5:82834843..82834902,+ | ||
|id=chr5:82834843..82834902,+ | |id=chr5:82834843..82834902,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.84e-19!42;CL:0000860!2.61e-16!45;CL:0000055!6.84e-14!180;CL:0000034!4.59e-11!444;CL:0000048!5.81e-11!430;CL:0000723!2.80e-10!436;CL:0000393!3.74e-09!60;CL:0000211!3.74e-09!60;CL:0000057!9.61e-09!75;CL:0002194!2.26e-08!63;CL:0000576!2.26e-08!63;CL:0000040!2.26e-08!63;CL:0000559!2.26e-08!63;CL:0000680!5.75e-08!57;CL:0000056!5.75e-08!57;CL:0000355!5.75e-08!57;CL:0000187!9.40e-08!54;CL:0002334!1.23e-07!12;CL:0002009!1.36e-07!65 | |ontology_enrichment_celltype=CL:0002057!4.84e-19!42;CL:0000860!2.61e-16!45;CL:0000055!6.84e-14!180;CL:0000034!4.59e-11!444;CL:0000048!5.81e-11!430;CL:0000723!2.80e-10!436;CL:0000393!3.74e-09!60;CL:0000211!3.74e-09!60;CL:0000057!9.61e-09!75;CL:0002194!2.26e-08!63;CL:0000576!2.26e-08!63;CL:0000040!2.26e-08!63;CL:0000559!2.26e-08!63;CL:0000680!5.75e-08!57;CL:0000056!5.75e-08!57;CL:0000355!5.75e-08!57;CL:0000187!9.40e-08!54;CL:0002334!1.23e-07!12;CL:0002009!1.36e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.13e-25;33!CL:0002057;8.13e-25;33!CL:0000473;2.14e-16;39!CL:0000234;2.14e-16;39!CL:0000576;5.65e-13;48!CL:0002334;2.88e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.53e-25,42;CL:0002057,9.53e-25,42;CL:0000473,8.64e-20,48;CL:0000234,8.64e-20,48;CL:0000048,2.28e-17,427;CL:0000034,2.67e-17,441;CL:0000723,1.89e-16,433;CL:0002194,4.53e-13,59;CL:0000576,4.53e-13,59;CL:0000040,4.53e-13,59;CL:0000559,4.53e-13,59;CL:0002009,3.12e-12,61;CL:0000134,6.64e-12,354;CL:0002320,8.73e-12,361;CL:0000057,1.45e-10,76;CL:0000839,2.18e-10,66;CL:0000219,2.94e-10,386;CL:0002334,3.78e-10,12;CL:0000557,4.67e-10,67;CL:0000766,9.84e-10,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-18;42 | |||
|ontology_enrichment_disease=DOID:2394!2.87e-09!14 | |ontology_enrichment_disease=DOID:2394!2.87e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.54e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.40e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.84e-13!167;UBERON:0000468!1.23e-11!659;UBERON:0000467!7.63e-09!625;UBERON:0000480!1.12e-08!626;UBERON:0001134!5.23e-08!61;UBERON:0002036!5.23e-08!61;UBERON:0003082!5.23e-08!61;UBERON:0002385!6.38e-08!63;UBERON:0001015!6.38e-08!63;UBERON:0000383!6.38e-08!63;UBERON:0000922!6.95e-08!612;UBERON:0000948!2.27e-07!24;UBERON:0005498!2.27e-07!24;UBERON:0004140!2.27e-07!24;UBERON:0009881!2.27e-07!24;UBERON:0004141!2.27e-07!24;UBERON:0003084!2.27e-07!24;UBERON:0007005!2.27e-07!24;UBERON:0004139!2.27e-07!24;UBERON:0004291!2.27e-07!24;UBERON:0000914!9.97e-07!83;UBERON:0002329!9.97e-07!83;UBERON:0003077!9.97e-07!83;UBERON:0003059!9.97e-07!83;UBERON:0007282!9.97e-07!83;UBERON:0009618!9.97e-07!83;UBERON:0007285!9.97e-07!83 | |ontology_enrichment_uberon=UBERON:0002204!1.84e-13!167;UBERON:0000468!1.23e-11!659;UBERON:0000467!7.63e-09!625;UBERON:0000480!1.12e-08!626;UBERON:0001134!5.23e-08!61;UBERON:0002036!5.23e-08!61;UBERON:0003082!5.23e-08!61;UBERON:0002385!6.38e-08!63;UBERON:0001015!6.38e-08!63;UBERON:0000383!6.38e-08!63;UBERON:0000922!6.95e-08!612;UBERON:0000948!2.27e-07!24;UBERON:0005498!2.27e-07!24;UBERON:0004140!2.27e-07!24;UBERON:0009881!2.27e-07!24;UBERON:0004141!2.27e-07!24;UBERON:0003084!2.27e-07!24;UBERON:0007005!2.27e-07!24;UBERON:0004139!2.27e-07!24;UBERON:0004291!2.27e-07!24;UBERON:0000914!9.97e-07!83;UBERON:0002329!9.97e-07!83;UBERON:0003077!9.97e-07!83;UBERON:0003059!9.97e-07!83;UBERON:0007282!9.97e-07!83;UBERON:0009618!9.97e-07!83;UBERON:0007285!9.97e-07!83 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.26e-15,315;UBERON:0004120,2.26e-15,315;UBERON:0006603,2.26e-15,315;UBERON:0002204,7.55e-14,167;UBERON:0002384,3.18e-12,371;UBERON:0003081,9.91e-11,203;UBERON:0002371,4.03e-10,76;UBERON:0001474,4.75e-09,82;UBERON:0004765,7.78e-09,90;UBERON:0001434,1.20e-08,100;UBERON:0002390,4.04e-07,98;UBERON:0003061,4.04e-07,98 | |||
|phase1_expression=2.36181893051724,7.70761886007539,3.24195129420734,4.00293193412522,1.78784437770915,7.85104671690332,0,0,2.61185628199839,0.245733936501509,0,0,0.263766978228454,0,0.331397375727916,4.70627602516243,4.21886169616784,2.19093027116212,6.34312638427659,0.246242116153576,0.408001382488506,0.313454721478088,0.85870796139317,1.09499540058307,1.63205431473244,0,0,0,1.57345710739562,0.383829398097213,1.85779347979291,0,0,0,0,0,0,2.76997704265939,13.0353890855592,8.24641308720237,0,0,0.257575567634187,15.8484080269726,3.40088349319928,4.60909716256851,23.0104746536628,6.57868620834921,8.05236564327269,21.2892370318391,6.40401766322752,2.12834006899727,17.5820297175675,12.2642089880927,13.5426486594342,28.4245932709333,5.45812300115692,1.57306439111559,18.3650335422542,1.60464513538047,1.91801137739712,10.8850929061616,5.58498241340569,6.39337125799041,49.6257798054879,3.40431134814684,4.35975574296902,26.6323585172148,25.5526630025899,2.82345498116652,26.0321786132349,2.20966581592539,3.16462387440884,0.845021145247767,0,1.67726916406701,4.71780250815279,6.90813707070929,5.30394436100364,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,14.6284119788377,3.35350429851818,0.895037932904712,1.0843174571537,1.00267582127178,2.462390822334,0,0.973269740605272,0.850813354476611,4.65631734671384,4.74307842742881,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44852317882041,7.21793916488105,7.15009576391382,20.6522366939146,10.6400514659507,1.12135520028461,3.20246987189115,2.96001058100592,0.933633106199299,1.0776853765575,2.12500474047496,0,2.30470369792,0,0,0,0.298897361103602,0,0.161872944368132,0.280901613404497,0,0.368502951935304,0.516628905878827,1.18800285728205,2.96720315134268,0,0,0.505008341862199,0.500474079487857,0,0.438977620880838,1.5324389789951,1.05166641234618,0.794025282120147,4.66413052791041,5.97960688691989,2.7551147150743,2.40072876867522,1.13357782162283,2.83404594050192,1.11670113798954,6.24472429292685,1.85130309806277,3.02920529092937,0.736399189138395,1.13152239773168,4.9701342952326,1.20902517873168,0,0,0,0,1.95157929807353,0.795178609928912,2.32387885739037,3.00617059544574,3.5324919122588,1.09493207722749,0,8.36213219650751,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,5.28339124061197,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,3.02367830757947,0.425325291727159,0.806026704325635,0.581267877027924,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0,0.43596006883328,0.36669142910475,3.87815147273333,0,0.845302752556,1.06375246633948,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.710783897485092,2.37585561880029,0.602878754119172,0,2.7992437530976,0,0,0,1.4377491329495,0,0,0.868687840005475,0.410952645100767,0.716243852959582,0,0.197030760201927,0,1.28343036279748,0.254094624222463,0,0.773288812777695,1.50764638800914,0.637938751653163,0,0,0,2.57652132610194,2.00068208423871,0.542530047399471,9.98260135347874,7.85087550707512,3.46945313074656,1.99140405487612,0,0,0,0.664225598535437,0.368738337083406,0.434418072340414,0,0,2.27444828735176,3.23571301227925,3.20182673410333,0,0,0,5.21026396419431,7.21271274453894,9.82310330515758,6.15067916427365,5.11707249066703,16.5679538777916,1.48418066444991,5.70575867069826,4.26148140751505,2.05317890034523,12.4621063004069,2.5566283261191,0.725156697549733,5.41367469818869,0.644566922551274,1.03333003348146,1.82091168006717,0.262248829918848,0.451199612907412,1.69433741629712,0.784349769176855,0,3.69430701125065,0,0,2.37507507712353,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0.976135183992909,0.618246069886334,0.27470839445503,0,0,0,6.42735719376638,0.96670718292122,0.770243085573222,0.921022048356777,0.551346289938122,2.0409846524972,1.74020032697074,1.19317278382541,3.56128142586949,1.15699440752685,0.192190067365106,0.255225424989168,0.50578890427775,0.929691098594572,16.0554296883626,1.3940745403212,0.616067160352178,1.59691809095107,0.869932992075073,1.48259375283136,0.143124886741991,0.372158369359667,0.949138274156178,0.190630193923825,0,1.71175595213568,2.22742273548156,0,1.07923474549989,1.09814811894422,2.12062324222236,0.202182481573316,3.17020642346017,0,0,3.65570234446927,3.16950440270266,0.545999645631943,3.39373036688911,5.65040583101214,1.65409603063837,2.65375590096488,1.31535265576129,1.15755106853338,1.31178950409327,0.202910376962704,0.92947049429925,0.845086807596724,1.14729081763241,0,1.07001315444375,0,2.32218398827431,5.59801318031833,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,1.62009431171434,0,0.320472213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|phase1_expression=2.36181893051724,7.70761886007539,3.24195129420734,4.00293193412522,1.78784437770915,7.85104671690332,0,0,2.61185628199839,0.245733936501509,0,0,0.263766978228454,0,0.331397375727916,4.70627602516243,4.21886169616784,2.19093027116212,6.34312638427659,0.246242116153576,0.408001382488506,0.313454721478088,0.85870796139317,1.09499540058307,1.63205431473244,0,0,0,1.57345710739562,0.383829398097213,1.85779347979291,0,0,0,0,0,0,2.76997704265939,13.0353890855592,8.24641308720237,0,0,0.257575567634187,15.8484080269726,3.40088349319928,4.60909716256851,23.0104746536628,6.57868620834921,8.05236564327269,21.2892370318391,6.40401766322752,2.12834006899727,17.5820297175675,12.2642089880927,13.5426486594342,28.4245932709333,5.45812300115692,1.57306439111559,18.3650335422542,1.60464513538047,1.91801137739712,10.8850929061616,5.58498241340569,6.39337125799041,49.6257798054879,3.40431134814684,4.35975574296902,26.6323585172148,25.5526630025899,2.82345498116652,26.0321786132349,2.20966581592539,3.16462387440884,0.845021145247767,0,1.67726916406701,4.71780250815279,6.90813707070929,5.30394436100364,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,14.6284119788377,3.35350429851818,0.895037932904712,1.0843174571537,1.00267582127178,2.462390822334,0,0.973269740605272,0.850813354476611,4.65631734671384,4.74307842742881,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44852317882041,7.21793916488105,7.15009576391382,20.6522366939146,10.6400514659507,1.12135520028461,3.20246987189115,2.96001058100592,0.933633106199299,1.0776853765575,2.12500474047496,0,2.30470369792,0,0,0,0.298897361103602,0,0.161872944368132,0.280901613404497,0,0.368502951935304,0.516628905878827,1.18800285728205,2.96720315134268,0,0,0.505008341862199,0.500474079487857,0,0.438977620880838,1.5324389789951,1.05166641234618,0.794025282120147,4.66413052791041,5.97960688691989,2.7551147150743,2.40072876867522,1.13357782162283,2.83404594050192,1.11670113798954,6.24472429292685,1.85130309806277,3.02920529092937,0.736399189138395,1.13152239773168,4.9701342952326,1.20902517873168,0,0,0,0,1.95157929807353,0.795178609928912,2.32387885739037,3.00617059544574,3.5324919122588,1.09493207722749,0,8.36213219650751,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,5.28339124061197,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,3.02367830757947,0.425325291727159,0.806026704325635,0.581267877027924,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0,0.43596006883328,0.36669142910475,3.87815147273333,0,0.845302752556,1.06375246633948,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.710783897485092,2.37585561880029,0.602878754119172,0,2.7992437530976,0,0,0,1.4377491329495,0,0,0.868687840005475,0.410952645100767,0.716243852959582,0,0.197030760201927,0,1.28343036279748,0.254094624222463,0,0.773288812777695,1.50764638800914,0.637938751653163,0,0,0,2.57652132610194,2.00068208423871,0.542530047399471,9.98260135347874,7.85087550707512,3.46945313074656,1.99140405487612,0,0,0,0.664225598535437,0.368738337083406,0.434418072340414,0,0,2.27444828735176,3.23571301227925,3.20182673410333,0,0,0,5.21026396419431,7.21271274453894,9.82310330515758,6.15067916427365,5.11707249066703,16.5679538777916,1.48418066444991,5.70575867069826,4.26148140751505,2.05317890034523,12.4621063004069,2.5566283261191,0.725156697549733,5.41367469818869,0.644566922551274,1.03333003348146,1.82091168006717,0.262248829918848,0.451199612907412,1.69433741629712,0.784349769176855,0,3.69430701125065,0,0,2.37507507712353,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0.976135183992909,0.618246069886334,0.27470839445503,0,0,0,6.42735719376638,0.96670718292122,0.770243085573222,0.921022048356777,0.551346289938122,2.0409846524972,1.74020032697074,1.19317278382541,3.56128142586949,1.15699440752685,0.192190067365106,0.255225424989168,0.50578890427775,0.929691098594572,16.0554296883626,1.3940745403212,0.616067160352178,1.59691809095107,0.869932992075073,1.48259375283136,0.143124886741991,0.372158369359667,0.949138274156178,0.190630193923825,0,1.71175595213568,2.22742273548156,0,1.07923474549989,1.09814811894422,2.12062324222236,0.202182481573316,3.17020642346017,0,0,3.65570234446927,3.16950440270266,0.545999645631943,3.39373036688911,5.65040583101214,1.65409603063837,2.65375590096488,1.31535265576129,1.15755106853338,1.31178950409327,0.202910376962704,0.92947049429925,0.845086807596724,1.14729081763241,0,1.07001315444375,0,2.32218398827431,5.59801318031833,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,1.62009431171434,0,0.320472213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| ||
|short_description=p@chr5:82834843..82834902,+ | |short_description=p@chr5:82834843..82834902,+ | ||
}} | }} |
Latest revision as of 16:56, 30 July 2015
Short description: | p@chr5:82834843..82834902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:82834843..82834902, + |
Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.53e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.53e-25 | 42 |
defensive cell | 8.64e-20 | 48 |
phagocyte | 8.64e-20 | 48 |
multi fate stem cell | 2.28e-17 | 427 |
stem cell | 2.67e-17 | 441 |
somatic stem cell | 1.89e-16 | 433 |
monopoietic cell | 4.53e-13 | 59 |
monocyte | 4.53e-13 | 59 |
monoblast | 4.53e-13 | 59 |
promonocyte | 4.53e-13 | 59 |
macrophage dendritic cell progenitor | 3.12e-12 | 61 |
mesenchymal cell | 6.64e-12 | 354 |
connective tissue cell | 8.73e-12 | 361 |
fibroblast | 1.45e-10 | 76 |
myeloid lineage restricted progenitor cell | 2.18e-10 | 66 |
motile cell | 2.94e-10 | 386 |
preadipocyte | 3.78e-10 | 12 |
granulocyte monocyte progenitor cell | 4.67e-10 | 67 |
myeloid leukocyte | 9.84e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.26e-15 | 315 |
mesoderm-derived structure | 2.26e-15 | 315 |
presumptive mesoderm | 2.26e-15 | 315 |
musculoskeletal system | 7.55e-14 | 167 |
connective tissue | 3.18e-12 | 371 |
lateral plate mesoderm | 9.91e-11 | 203 |
bone marrow | 4.03e-10 | 76 |
bone element | 4.75e-09 | 82 |
skeletal element | 7.78e-09 | 90 |
skeletal system | 1.20e-08 | 100 |
hematopoietic system | 4.04e-07 | 98 |
blood island | 4.04e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.40e-11 | 14 |