FFCP PHASE1:Hg19::chr5:82832922..82832942,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:82832922..82832942,+ | |||
|coexpression_cluster_id=C456 | |||
|description=CAGE_peak_at_chr5:82832922..82832942,+ | |description=CAGE_peak_at_chr5:82832922..82832942,+ | ||
|id=chr5:82832922..82832942,+ | |id=chr5:82832922..82832942,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.58e-26!42;CL:0000860!1.32e-23!45;CL:0000048!1.31e-12!430;CL:0002194!6.03e-12!63;CL:0000576!6.03e-12!63;CL:0000040!6.03e-12!63;CL:0000559!6.03e-12!63;CL:0000723!8.81e-12!436;CL:0000034!2.15e-11!444;CL:0002009!3.70e-11!65;CL:0000839!2.02e-09!70;CL:0000557!4.14e-09!71;CL:0000766!5.76e-09!76;CL:0002334!1.44e-08!12;CL:0000055!4.48e-08!180;CL:0000057!5.17e-07!75;CL:0002320!6.49e-07!365;CL:0000134!7.47e-07!358 | |ontology_enrichment_celltype=CL:0002057!1.58e-26!42;CL:0000860!1.32e-23!45;CL:0000048!1.31e-12!430;CL:0002194!6.03e-12!63;CL:0000576!6.03e-12!63;CL:0000040!6.03e-12!63;CL:0000559!6.03e-12!63;CL:0000723!8.81e-12!436;CL:0000034!2.15e-11!444;CL:0002009!3.70e-11!65;CL:0000839!2.02e-09!70;CL:0000557!4.14e-09!71;CL:0000766!5.76e-09!76;CL:0002334!1.44e-08!12;CL:0000055!4.48e-08!180;CL:0000057!5.17e-07!75;CL:0002320!6.49e-07!365;CL:0000134!7.47e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-47;33!CL:0002057;1.50e-47;33!CL:0000473;3.55e-33;39!CL:0000234;3.55e-33;39!CL:0000576;8.95e-24;48!CL:0002334;1.59e-14;12!CL:0000766;1.46e-10;69!CL:1000306;1.53e-09;4!CL:0002547;1.53e-09;4!CL:0002579;8.13e-08;3!CL:0002580;9.15e-08;3!CL:0000763;4.20e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.09e-45,42;CL:0002057,1.09e-45,42;CL:0000473,7.88e-39,48;CL:0000234,7.88e-39,48;CL:0002194,2.97e-29,59;CL:0000576,2.97e-29,59;CL:0000040,2.97e-29,59;CL:0000559,2.97e-29,59;CL:0002009,5.06e-28,61;CL:0000839,2.86e-25,66;CL:0000557,9.07e-25,67;CL:0000766,1.79e-22,72;CL:0002334,1.33e-14,12;CL:0000134,3.07e-14,354;CL:0002320,1.20e-13,361;CL:0000763,2.70e-12,108;CL:0000049,2.70e-12,108;CL:0000048,3.13e-12,427;CL:0002087,4.66e-12,115;CL:0000723,7.99e-12,433;CL:0000219,1.42e-11,386;CL:0000034,2.68e-11,441;CL:0002031,2.66e-10,120;CL:1000306,1.45e-09,4;CL:0002547,1.45e-09,4;CL:0000738,5.37e-09,136;CL:0002580,4.52e-08,3;CL:0002579,9.03e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-32;42 | |||
|ontology_enrichment_disease=DOID:2394!9.56e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.14e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.71e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.83e-14!167;UBERON:0004765!6.31e-08!101;UBERON:0001434!6.31e-08!101;UBERON:0002371!8.49e-08!80;UBERON:0000926!2.88e-07!448;UBERON:0004120!2.88e-07!448;UBERON:0006603!2.88e-07!448;UBERON:0000468!3.23e-07!659;UBERON:0002384!4.15e-07!375;UBERON:0003081!4.52e-07!216;UBERON:0001474!4.85e-07!86;UBERON:0002390!4.97e-07!102;UBERON:0003061!4.97e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.37e-09;6!UBERON:0002358;1.37e-09;6!UBERON:0003684;1.37e-09;6!UBERON:0001178;1.37e-09;6!UBERON:0004797;1.53e-09;4!UBERON:0000415;1.53e-09;4!UBERON:0007240;1.53e-09;4!UBERON:0005742;1.53e-09;4!UBERON:0005734;1.53e-09;4!UBERON:0004664;1.53e-09;4!UBERON:0004663;1.53e-09;4!UBERON:0004457;9.95e-09;9!UBERON:0000042;9.95e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.44e-21,76;UBERON:0001474,3.04e-20,82;UBERON:0004765,1.08e-17,90;UBERON:0002390,9.81e-17,98;UBERON:0003061,9.81e-17,98;UBERON:0001434,2.89e-16,100;UBERON:0002405,1.49e-15,93;UBERON:0002193,2.14e-14,108;UBERON:0002384,1.34e-13,371;UBERON:0000926,3.25e-13,315;UBERON:0004120,3.25e-13,315;UBERON:0006603,3.25e-13,315;UBERON:0002204,1.55e-12,167;UBERON:0003081,1.73e-11,203;UBERON:0000415,1.45e-09,4;UBERON:0007240,1.45e-09,4;UBERON:0005742,1.45e-09,4;UBERON:0005734,1.45e-09,4;UBERON:0004664,1.45e-09,4;UBERON:0004663,1.45e-09,4;UBERON:0003688,1.99e-09,6;UBERON:0002358,1.99e-09,6;UBERON:0003684,1.99e-09,6;UBERON:0001178,1.99e-09,6 | |||
|phase1_expression=0.908391896352783,1.92690471501885,1.55049844505568,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0.821246550437305,0.125542639594803,0,0,0,0,0.767658796194425,0.619264493264304,0,0,0,0,0,0,1.10799081706375,1.80490002723128,0.651032612147555,0,0,0,6.54292074508041,1.88937971844405,1.21292030593908,4.18372266430232,0.822335776043652,0.619412741790207,4.89077066947656,3.07392847834921,1.89185783910868,3.10271112662957,3.22742341791913,1.35426486594342,8.84738995850242,1.36453075028923,0.898893937780338,5.50951006267625,1.60464513538047,2.55734850319616,4.28806690242731,2.79249120670285,1.27867425159808,9.86711411337186,1.13477044938228,1.24564449799115,5.52747063564835,7.30076085788282,0.868755378820466,6.65939452896706,1.10483290796269,0.949387162322653,0.422510572623884,0,0.209658645508376,2.2465726229299,2.4028302854641,2.25015821375912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.434539556882471,0,0,0.189069634328136,1.55210578223795,1.05401742831751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,1.39293562831038,1.85372853138506,2.29469296599051,1.06400514659507,0.560677600142307,0,0.49333509683432,0,0.404132016209064,0.817309515567294,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.989067717114227,0,0,0.336672227908132,0.500474079487857,0,0,0,0.300476117813194,0,0.89694817844431,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,1.35021065793013,0.389748020644795,0.252433774244115,0.0920498986422993,0.161646056818812,1.42003837006646,0.302256294682921,0.169560592310488,0,0,0,0.243947412259191,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,0,0,0.207970861530807,1.42743191037729,0.788512075169673,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0.82707210449155,1.72571360654893,0.74709290462411,0,0,0,1.98486246255021,1.38115775959256,3.92924132206303,1.79394808957981,1.02341449813341,4.66476371316462,0,1.23367755042124,1.24293207719189,0.492762936082855,3.63478100428535,0.697262270759755,0,1.00253235151642,0.184161977871793,0.114814448164607,0.546273504020151,0,0,0,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.214840489736547,0.580066775656914,0.511359764496605,0.534192213880424,0,0.192190067365106,0,0,0.464845549297286,2.20368642781448,0,0,0,0,0.9266210955196,0.429374660225974,0,0,0,0.255897791311334,0,0,0.78494864019923,0.899362287916574,1.09814811894422,0.235624804691373,0.202182481573316,1.58510321173008,0,0,0.974853958525138,0,0.136499911407986,0.424216295861138,2.26016233240486,0.551365343546124,0.66343897524122,0,0,0,0,0,0.563391205064483,0.286822704408103,0.0982490410131212,0.7133421029625,0,1.26664581178598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0.659215496907038,0,0.996239941255349,0,0,0,0,1.55519793830904,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0,0,0.230850775511391,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0.39961921916426,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0.458320848023367,0,0,0,0.446342914883745,0.201550417460179,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0.953423842781029,0.964518890790115,0.687697182986169,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0,0,0,0,1.49254802886874,0.233713309847224,0.554805861502613,0,0.251567901752575,0.889811221596536,0.457680136793847,1.51230923763239,2.79786961049005,1.47855149989634,1.27437413730962,0,0.310525913752519,7.87941794897625,2.65841714557995,0.521745061811734,0.601030435988874,2.66563648518157,2.03435366602331,0.90924329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|phase1_expression=0.908391896352783,1.92690471501885,1.55049844505568,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0.821246550437305,0.125542639594803,0,0,0,0,0.767658796194425,0.619264493264304,0,0,0,0,0,0,1.10799081706375,1.80490002723128,0.651032612147555,0,0,0,6.54292074508041,1.88937971844405,1.21292030593908,4.18372266430232,0.822335776043652,0.619412741790207,4.89077066947656,3.07392847834921,1.89185783910868,3.10271112662957,3.22742341791913,1.35426486594342,8.84738995850242,1.36453075028923,0.898893937780338,5.50951006267625,1.60464513538047,2.55734850319616,4.28806690242731,2.79249120670285,1.27867425159808,9.86711411337186,1.13477044938228,1.24564449799115,5.52747063564835,7.30076085788282,0.868755378820466,6.65939452896706,1.10483290796269,0.949387162322653,0.422510572623884,0,0.209658645508376,2.2465726229299,2.4028302854641,2.25015821375912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.434539556882471,0,0,0.189069634328136,1.55210578223795,1.05401742831751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,1.39293562831038,1.85372853138506,2.29469296599051,1.06400514659507,0.560677600142307,0,0.49333509683432,0,0.404132016209064,0.817309515567294,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0.989067717114227,0,0,0.336672227908132,0.500474079487857,0,0,0,0.300476117813194,0,0.89694817844431,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,1.35021065793013,0.389748020644795,0.252433774244115,0.0920498986422993,0.161646056818812,1.42003837006646,0.302256294682921,0.169560592310488,0,0,0,0.243947412259191,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,0,0,0.207970861530807,1.42743191037729,0.788512075169673,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0.82707210449155,1.72571360654893,0.74709290462411,0,0,0,1.98486246255021,1.38115775959256,3.92924132206303,1.79394808957981,1.02341449813341,4.66476371316462,0,1.23367755042124,1.24293207719189,0.492762936082855,3.63478100428535,0.697262270759755,0,1.00253235151642,0.184161977871793,0.114814448164607,0.546273504020151,0,0,0,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.214840489736547,0.580066775656914,0.511359764496605,0.534192213880424,0,0.192190067365106,0,0,0.464845549297286,2.20368642781448,0,0,0,0,0.9266210955196,0.429374660225974,0,0,0,0.255897791311334,0,0,0.78494864019923,0.899362287916574,1.09814811894422,0.235624804691373,0.202182481573316,1.58510321173008,0,0,0.974853958525138,0,0.136499911407986,0.424216295861138,2.26016233240486,0.551365343546124,0.66343897524122,0,0,0,0,0,0.563391205064483,0.286822704408103,0.0982490410131212,0.7133421029625,0,1.26664581178598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0.659215496907038,0,0.996239941255349,0,0,0,0,1.55519793830904,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0,0,0.230850775511391,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0.39961921916426,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0.458320848023367,0,0,0,0.446342914883745,0.201550417460179,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0.953423842781029,0.964518890790115,0.687697182986169,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0,0,0,0,1.49254802886874,0.233713309847224,0.554805861502613,0,0.251567901752575,0.889811221596536,0.457680136793847,1.51230923763239,2.79786961049005,1.47855149989634,1.27437413730962,0,0.310525913752519,7.87941794897625,2.65841714557995,0.521745061811734,0.601030435988874,2.66563648518157,2.03435366602331,0.90924329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| ||
|short_description=p@chr5:82832922..82832942,+ | |short_description=p@chr5:82832922..82832942,+ | ||
}} | }} |
Latest revision as of 16:56, 30 July 2015
Short description: | p@chr5:82832922..82832942, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:82832922..82832942, + |
Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.09e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.09e-45 | 42 |
defensive cell | 7.88e-39 | 48 |
phagocyte | 7.88e-39 | 48 |
monopoietic cell | 2.97e-29 | 59 |
monocyte | 2.97e-29 | 59 |
monoblast | 2.97e-29 | 59 |
promonocyte | 2.97e-29 | 59 |
macrophage dendritic cell progenitor | 5.06e-28 | 61 |
myeloid lineage restricted progenitor cell | 2.86e-25 | 66 |
granulocyte monocyte progenitor cell | 9.07e-25 | 67 |
myeloid leukocyte | 1.79e-22 | 72 |
preadipocyte | 1.33e-14 | 12 |
mesenchymal cell | 3.07e-14 | 354 |
connective tissue cell | 1.20e-13 | 361 |
myeloid cell | 2.70e-12 | 108 |
common myeloid progenitor | 2.70e-12 | 108 |
multi fate stem cell | 3.13e-12 | 427 |
nongranular leukocyte | 4.66e-12 | 115 |
somatic stem cell | 7.99e-12 | 433 |
motile cell | 1.42e-11 | 386 |
stem cell | 2.68e-11 | 441 |
hematopoietic lineage restricted progenitor cell | 2.66e-10 | 120 |
fibroblast of tunica adventitia of artery | 1.45e-09 | 4 |
fibroblast of the aortic adventitia | 1.45e-09 | 4 |
leukocyte | 5.37e-09 | 136 |
preadipocyte of the breast | 4.52e-08 | 3 |
omentum preadipocyte | 9.03e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.44e-21 | 76 |
bone element | 3.04e-20 | 82 |
skeletal element | 1.08e-17 | 90 |
hematopoietic system | 9.81e-17 | 98 |
blood island | 9.81e-17 | 98 |
skeletal system | 2.89e-16 | 100 |
immune system | 1.49e-15 | 93 |
hemolymphoid system | 2.14e-14 | 108 |
connective tissue | 1.34e-13 | 371 |
mesoderm | 3.25e-13 | 315 |
mesoderm-derived structure | 3.25e-13 | 315 |
presumptive mesoderm | 3.25e-13 | 315 |
musculoskeletal system | 1.55e-12 | 167 |
lateral plate mesoderm | 1.73e-11 | 203 |
artery wall | 1.45e-09 | 4 |
tunica adventitia of artery | 1.45e-09 | 4 |
adventitia | 1.45e-09 | 4 |
tunica adventitia of blood vessel | 1.45e-09 | 4 |
aorta tunica adventitia | 1.45e-09 | 4 |
aorta wall | 1.45e-09 | 4 |
omentum | 1.99e-09 | 6 |
peritoneum | 1.99e-09 | 6 |
abdominal cavity | 1.99e-09 | 6 |
visceral peritoneum | 1.99e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.71e-10 | 14 |