FFCP PHASE1:Hg19::chr5:82808116..82808153,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=1462 | |EntrezGene=entrezgene:1462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=2464 | |HGNC=HGNC:2464 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=195bp_to_ENST00000515397_5end | |association_with_transcript=195bp_to_ENST00000515397_5end | ||
|cluster_id=chr5:82808116..82808153,+ | |||
|coexpression_cluster_id=C456 | |coexpression_cluster_id=C456 | ||
|description=CAGE_peak_12_at_VCAN_5end | |description=CAGE_peak_12_at_VCAN_5end | ||
Revision as of 16:55, 30 July 2015
| Short description: | p12@VCAN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_12_at_VCAN_5end |
| Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
| Association with transcript: | 195bp_to_ENST00000515397_5end |
| EntrezGene: | 1462 |
| HGNC: | 2464 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p12@VCAN |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 1.42e-16 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.42e-16 | 42 |
| defensive cell | 1.52e-13 | 48 |
| phagocyte | 1.52e-13 | 48 |
| multi fate stem cell | 6.37e-11 | 427 |
| stem cell | 1.23e-10 | 441 |
| somatic stem cell | 2.01e-10 | 433 |
| monopoietic cell | 2.12e-09 | 59 |
| monocyte | 2.12e-09 | 59 |
| monoblast | 2.12e-09 | 59 |
Showing 1 to 10 of 23 entries
| Ontology term | p-value | n |
|---|---|---|
| heart | 2.64e-11 | 24 |
| primitive heart tube | 2.64e-11 | 24 |
| primary heart field | 2.64e-11 | 24 |
| anterior lateral plate mesoderm | 2.64e-11 | 24 |
| heart tube | 2.64e-11 | 24 |
| heart primordium | 2.64e-11 | 24 |
| cardiac mesoderm | 2.64e-11 | 24 |
| cardiogenic plate | 2.64e-11 | 24 |
| heart rudiment | 2.64e-11 | 24 |
| mesoderm | 6.42e-10 | 315 |
Showing 1 to 10 of 23 entries
