FFCP PHASE1:Hg19::chr5:76383909..76383944,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:76383909..76383944,+ to FFCP PHASE1:Hg19::chr5:76383909..76383944,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000514288_5end | |||
|cluster_id=chr5:76383909..76383944,+ | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_1_at_ENST00000514288_5end | |||
|id=chr5:76383909..76383944,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000990;1.05e-20;8!CL:0002619;2.01e-17;3!CL:0000451;7.60e-17;10!CL:0000235;1.74e-15;6!CL:0000453;8.71e-10;5!CL:0000147;2.12e-09;14!CL:0000148;7.20e-09;10!CL:0000840;8.28e-09;5!CL:0002138;1.23e-08;6!CL:0002567;2.18e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.09e-20,8;CL:0002619,1.85e-17,3;CL:0000451,7.84e-17,10;CL:0000235,1.74e-15,6;CL:0000763,1.49e-10,108;CL:0000049,1.49e-10,108;CL:0000453,8.86e-10,5;CL:0000147,2.40e-09,14;CL:0000557,3.02e-09,67;CL:0002194,5.18e-09,59;CL:0000576,5.18e-09,59;CL:0000040,5.18e-09,59;CL:0000559,5.18e-09,59;CL:0000148,8.08e-09,10;CL:0000541,8.08e-09,10;CL:0000840,8.40e-09,5;CL:0001029,8.40e-09,5;CL:0005020,1.18e-08,6;CL:0002138,1.18e-08,6;CL:0005022,1.18e-08,6;CL:0002009,1.18e-08,61;CL:0002567,2.15e-08,3;CL:0000839,7.50e-08,66;CL:0000766,4.90e-07,72 | |||
|ontology_enrichment_development_v019=CL:0005022;1.23e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.65e-15!115;UBERON:0001049!8.12e-11!57;UBERON:0005068!8.12e-11!57;UBERON:0006241!8.12e-11!57;UBERON:0007135!8.12e-11!57;UBERON:0005743!1.25e-10!86;UBERON:0000073!9.33e-10!94;UBERON:0001016!9.33e-10!94;UBERON:0002616!2.26e-09!59;UBERON:0001017!2.70e-09!82;UBERON:0000955!1.87e-08!69;UBERON:0006238!1.87e-08!69;UBERON:0003075!4.86e-08!86;UBERON:0007284!4.86e-08!86;UBERON:0003080!8.87e-08!42;UBERON:0002346!3.12e-07!90;UBERON:0002780!3.58e-07!41;UBERON:0001890!3.58e-07!41;UBERON:0006240!3.58e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;9.18e-08;3!UBERON:0004755;9.18e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,2.88e-10,100;UBERON:0004765,3.18e-10,90;UBERON:0001474,6.05e-10,82;UBERON:0002405,7.10e-10,93;UBERON:0002193,4.37e-08,108;UBERON:0002371,6.86e-08,76;UBERON:0002418,8.88e-08,3;UBERON:0004755,8.88e-08,3 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,5.06599756336621,0,0.261185628199839,0.245733936501509,0,0,0,0.495065411840187,1.32558950291166,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0,0,5.82180233023803,3.88672399222775,9.78787157009909,0.145398238779565,0,0,0,0.822335776043652,0,0.28769239232215,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.44931452458598,0.300353785683013,1.12507910687956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0,0.458426764241994,0,0,4.54366351116557,3.48259474598534,3.72282289452822,0,0,0,0.198762407366705,0,0,0,0,0,0,1.55050055501597,7.1153252537342,2.00832367658802,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,12.5570673104573,0.936017060556951,6.98566462757023,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,4.20187268114105,5.86087236050235,0,1.13110241973656,0.300343057843917,3.71574362419752,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.054170194371,10.5416969741516,0.239624855491583,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,1.31205858279882,0.650756789328606,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,0,0,0,0,0,0,0.191505370132367,1.90506224451495,1.29848776109822,0.561594356226918,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,2.93016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0.442287822516696,0,0,0,0,0.67401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,1.412098027064,0,0,0,0.126621591911757,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,2.55493176133945,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0.209818352539992,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.39669780522807,0,0,1.38823636338003,0.314408610199332,0,0.992332043623902,0,0,0,0.544017803369474,0.5013797880454,2.14441903734423,0.983617892129413,0,0,0.122026264901963,0.250381861413,0,0.443716206147409,0.18628920882415,0,0,1.97143852804142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0.138258436151731,1.94860308839388,1.19578356282027,1.14495775979091,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.970423302570136,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0.504143392443436,0.207471757392654,0,0,0,0,0,0,0,0,2.78482710962785,0.225630985047772,0,0.781514011233092,0,0,0.147856086217045,0.135075169236789,0,0.413373593002368,0.0634158101939068,0,0.548257766857182,0,0,0.255524855279191,0,0,0.606965604236632,0,0.177404740325278,0,0.342976018874837,0.135939465953663,0.328863867814245,0,0.222462803784138,0.078493092850514,0,1.12108865325516,0,0,0.47775168788705,0.357382720883282,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,0,0.975343399858155,0,0,0,0.485710993059139,0,0,0,0.79062257427272,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.657887425858975,0.580120991762195,0,0,0,0,0,0.917458566809082,0.286679166302903,1.57771562193185,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.530450887527676,0,0.829169439458779,0.20686599172379,0.426467963801962,0.476128862927481,0.452122368852043,0.248298857183432,0,0.190941474834495,0.606351566874658,0,0,0.134704106029175,0.286888821570705,0,0.0814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|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,5.06599756336621,0,0.261185628199839,0.245733936501509,0,0,0,0.495065411840187,1.32558950291166,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0,0,5.82180233023803,3.88672399222775,9.78787157009909,0.145398238779565,0,0,0,0.822335776043652,0,0.28769239232215,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.44931452458598,0.300353785683013,1.12507910687956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0,0.458426764241994,0,0,4.54366351116557,3.48259474598534,3.72282289452822,0,0,0,0.198762407366705,0,0,0,0,0,0,1.55050055501597,7.1153252537342,2.00832367658802,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,12.5570673104573,0.936017060556951,6.98566462757023,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,4.20187268114105,5.86087236050235,0,1.13110241973656,0.300343057843917,3.71574362419752,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.054170194371,10.5416969741516,0.239624855491583,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,1.31205858279882,0.650756789328606,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,0,0,0,0,0,0,0.191505370132367,1.90506224451495,1.29848776109822,0.561594356226918,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,2.93016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0.442287822516696,0,0,0,0,0.67401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,1.412098027064,0,0,0,0.126621591911757,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,2.55493176133945,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0.209818352539992,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.39669780522807,0,0,1.38823636338003,0.314408610199332,0,0.992332043623902,0,0,0,0.544017803369474,0.5013797880454,2.14441903734423,0.983617892129413,0,0,0.122026264901963,0.250381861413,0,0.443716206147409,0.18628920882415,0,0,1.97143852804142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0.138258436151731,1.94860308839388,1.19578356282027,1.14495775979091,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.970423302570136,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0.504143392443436,0.207471757392654,0,0,0,0,0,0,0,0,2.78482710962785,0.225630985047772,0,0.781514011233092,0,0,0.147856086217045,0.135075169236789,0,0.413373593002368,0.0634158101939068,0,0.548257766857182,0,0,0.255524855279191,0,0,0.606965604236632,0,0.177404740325278,0,0.342976018874837,0.135939465953663,0.328863867814245,0,0.222462803784138,0.078493092850514,0,1.12108865325516,0,0,0.47775168788705,0.357382720883282,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,0,0.975343399858155,0,0,0,0.485710993059139,0,0,0,0.79062257427272,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.657887425858975,0.580120991762195,0,0,0,0,0,0.917458566809082,0.286679166302903,1.57771562193185,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.530450887527676,0,0.829169439458779,0.20686599172379,0.426467963801962,0.476128862927481,0.452122368852043,0.248298857183432,0,0.190941474834495,0.606351566874658,0,0,0.134704106029175,0.286888821570705,0,0.0814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| ||
|short_description=p1@ENST00000514288 | |||
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Latest revision as of 16:29, 30 July 2015
Short description: | p1@ENST00000514288 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000514288_5end |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | 4bp_to_ENST00000514288_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.09e-20 | 8 |
adult endothelial progenitor cell | 1.85e-17 | 3 |
dendritic cell | 7.84e-17 | 10 |
macrophage | 1.74e-15 | 6 |
myeloid cell | 1.49e-10 | 108 |
common myeloid progenitor | 1.49e-10 | 108 |
Langerhans cell | 8.86e-10 | 5 |
pigment cell | 2.40e-09 | 14 |
granulocyte monocyte progenitor cell | 3.02e-09 | 67 |
monopoietic cell | 5.18e-09 | 59 |
monocyte | 5.18e-09 | 59 |
monoblast | 5.18e-09 | 59 |
promonocyte | 5.18e-09 | 59 |
melanocyte | 8.08e-09 | 10 |
melanoblast | 8.08e-09 | 10 |
immature conventional dendritic cell | 8.40e-09 | 5 |
common dendritic progenitor | 8.40e-09 | 5 |
lymphangioblast | 1.18e-08 | 6 |
endothelial cell of lymphatic vessel | 1.18e-08 | 6 |
vascular lymphangioblast | 1.18e-08 | 6 |
macrophage dendritic cell progenitor | 1.18e-08 | 61 |
light melanocyte | 2.15e-08 | 3 |
myeloid lineage restricted progenitor cell | 7.50e-08 | 66 |
myeloid leukocyte | 4.90e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 2.88e-10 | 100 |
skeletal element | 3.18e-10 | 90 |
bone element | 6.05e-10 | 82 |
immune system | 7.10e-10 | 93 |
hemolymphoid system | 4.37e-08 | 108 |
bone marrow | 6.86e-08 | 76 |
cartilage tissue | 8.88e-08 | 3 |
skeletal tissue | 8.88e-08 | 3 |