FFCP PHASE1:Hg19::chr5:75839007..75839024,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:75839007..75839024,+ | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_at_chr5:75839007..75839024,+ | |||
|id=chr5:75839007..75839024,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.43e-75!42;CL:0000860!2.34e-69!45;CL:0000839!4.27e-68!70;CL:0000766!3.74e-67!76;CL:0000557!2.28e-64!71;CL:0002194!2.31e-62!63;CL:0000576!2.31e-62!63;CL:0000040!2.31e-62!63;CL:0000559!2.31e-62!63;CL:0002009!5.55e-60!65;CL:0000738!5.42e-59!140;CL:0002031!8.96e-59!124;CL:0002087!2.10e-57!119;CL:0000037!1.61e-56!172;CL:0000566!1.61e-56!172;CL:0002032!4.47e-53!165;CL:0000837!4.47e-53!165;CL:0000763!2.27e-52!112;CL:0000049!2.27e-52!112;CL:0000988!3.70e-52!182;CL:0000134!2.95e-16!358;CL:0002320!1.58e-15!365;CL:0002393!2.51e-15!9;CL:0002397!2.51e-15!9;CL:0000219!5.53e-13!390;CL:0000048!5.18e-11!430;CL:0000624!6.62e-11!6;CL:0000034!1.41e-10!444;CL:0000723!1.44e-10!436;CL:0000791!4.93e-08!18;CL:0000789!4.93e-08!18;CL:0002420!4.93e-08!18;CL:0002419!4.93e-08!18;CL:0000790!4.93e-08!18;CL:0000084!1.15e-07!25;CL:0000827!1.15e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.23e-84;33!CL:0002057;1.23e-84;33!CL:0000473;5.12e-66;39!CL:0000234;5.12e-66;39!CL:0000576;1.17e-43;48!CL:0000766;2.71e-31;69!CL:0002087;5.32e-15;104!CL:0000763;1.03e-14;100!CL:0000738;4.16e-12;136!CL:0000767;4.27e-07;3!CL:0000988;8.83e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.02e-83,42;CL:0002057,1.02e-83,42;CL:0000473,1.67e-83,48;CL:0000234,1.67e-83,48;CL:0002194,1.82e-65,59;CL:0000576,1.82e-65,59;CL:0000040,1.82e-65,59;CL:0000559,1.82e-65,59;CL:0000766,1.39e-64,72;CL:0002009,3.87e-63,61;CL:0000839,2.48e-62,66;CL:0000557,2.58e-61,67;CL:0002031,1.05e-43,120;CL:0000763,1.23e-43,108;CL:0000049,1.23e-43,108;CL:0002087,5.87e-43,115;CL:0000738,1.32e-42,136;CL:0002032,5.45e-37,161;CL:0000837,5.45e-37,161;CL:0000037,3.88e-35,168;CL:0000988,5.71e-33,177;CL:0000134,1.32e-12,354;CL:0002320,3.30e-12,361;CL:0000219,8.37e-11,386;CL:0000034,2.63e-09,441;CL:0000048,4.37e-09,427;CL:0000723,7.55e-09,433;CL:0000767,5.55e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.62e-58;42!CL:0000049;2.95e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.51e-58!102;UBERON:0003061!2.51e-58!102;UBERON:0002371!9.06e-58!80;UBERON:0002193!3.31e-53!112;UBERON:0001474!1.38e-52!86;UBERON:0002405!5.58e-46!115;UBERON:0004765!2.53e-42!101;UBERON:0001434!2.53e-42!101;UBERON:0003081!1.82e-23!216;UBERON:0002204!3.93e-21!167;UBERON:0002384!1.54e-14!375;UBERON:0004177!1.68e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.40e-53,76;UBERON:0001474,5.42e-49,82;UBERON:0004765,4.42e-44,90;UBERON:0002405,1.87e-42,93;UBERON:0002390,5.82e-40,98;UBERON:0003061,5.82e-40,98;UBERON:0001434,4.93e-39,100;UBERON:0002193,1.16e-35,108;UBERON:0002204,1.04e-20,167;UBERON:0003081,3.95e-17,203;UBERON:0002384,1.15e-11,371;UBERON:0000926,1.41e-08,315;UBERON:0004120,1.41e-08,315;UBERON:0006603,1.41e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0.767658796194425,1.08371286321253,0,0,0,0,0,0.880801318004542,2.76997704265939,1.20326668482085,0.868043482863407,0.223915474239924,0,0.77272670290256,1.59938062657521,0.377875943688809,0.485168122375632,3.0215774797739,1.6446715520873,1.85823822537062,2.58923153089935,1.5369642391746,6.3850202069918,11.0318617835718,5.16387746867061,9.47985406160392,2.82363509313907,1.63743690034707,2.24723484445085,17.1406979727705,11.8743740018155,9.59005688698562,0.659702600373432,0.797854630486527,1.27867425159808,14.5104619314292,5.6738522469114,13.0792672289071,3.26623264833766,2.60741459210101,2.6062661364614,9.08099253950053,9.20694089968912,15.1901945971625,0.845021145247767,0.212604299965044,0.838634582033504,0.336985893439485,0.300353785683013,0.48217676009124,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0.393419540227666,0.393010762749165,1.43921049299656,0,0.32592226663359,0.473447805734733,0,0.111410456885174,1.76763544484902,1.10766947291811,0.270803863765016,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0,0,30.5451207495485,0.880484340132261,0.829312462163088,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0.788123040807709,0.431255149719035,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,1.4098700508785,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49888955420619,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,1.33053555243958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:75839007..75839024,+ | |||
}} |
Latest revision as of 16:24, 30 July 2015
Short description: | p@chr5:75839007..75839024, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:75839007..75839024, + |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.02e-83 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-83 | 42 |
defensive cell | 1.67e-83 | 48 |
phagocyte | 1.67e-83 | 48 |
monopoietic cell | 1.82e-65 | 59 |
monocyte | 1.82e-65 | 59 |
monoblast | 1.82e-65 | 59 |
promonocyte | 1.82e-65 | 59 |
myeloid leukocyte | 1.39e-64 | 72 |
macrophage dendritic cell progenitor | 3.87e-63 | 61 |
myeloid lineage restricted progenitor cell | 2.48e-62 | 66 |
granulocyte monocyte progenitor cell | 2.58e-61 | 67 |
hematopoietic lineage restricted progenitor cell | 1.05e-43 | 120 |
myeloid cell | 1.23e-43 | 108 |
common myeloid progenitor | 1.23e-43 | 108 |
nongranular leukocyte | 5.87e-43 | 115 |
leukocyte | 1.32e-42 | 136 |
hematopoietic oligopotent progenitor cell | 5.45e-37 | 161 |
hematopoietic multipotent progenitor cell | 5.45e-37 | 161 |
hematopoietic stem cell | 3.88e-35 | 168 |
hematopoietic cell | 5.71e-33 | 177 |
mesenchymal cell | 1.32e-12 | 354 |
connective tissue cell | 3.30e-12 | 361 |
motile cell | 8.37e-11 | 386 |
stem cell | 2.63e-09 | 441 |
multi fate stem cell | 4.37e-09 | 427 |
somatic stem cell | 7.55e-09 | 433 |
basophil | 5.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.40e-53 | 76 |
bone element | 5.42e-49 | 82 |
skeletal element | 4.42e-44 | 90 |
immune system | 1.87e-42 | 93 |
hematopoietic system | 5.82e-40 | 98 |
blood island | 5.82e-40 | 98 |
skeletal system | 4.93e-39 | 100 |
hemolymphoid system | 1.16e-35 | 108 |
musculoskeletal system | 1.04e-20 | 167 |
lateral plate mesoderm | 3.95e-17 | 203 |
connective tissue | 1.15e-11 | 371 |
mesoderm | 1.41e-08 | 315 |
mesoderm-derived structure | 1.41e-08 | 315 |
presumptive mesoderm | 1.41e-08 | 315 |