FFCP PHASE1:Hg19::chr5:65030399..65030409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:65030399..65030409,+ | |||
|coexpression_cluster_id=C432 | |coexpression_cluster_id=C432 | ||
|description=CAGE_peak_at_chr5:65030399..65030409,+ | |description=CAGE_peak_at_chr5:65030399..65030409,+ | ||
|id=chr5:65030399..65030409,+ | |id=chr5:65030399..65030409,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.39e-45!42;CL:0000860!3.17e-42!45;CL:0000766!2.44e-32!76;CL:0002194!3.13e-29!63;CL:0000576!3.13e-29!63;CL:0000040!3.13e-29!63;CL:0000559!3.13e-29!63;CL:0002009!2.69e-28!65;CL:0000839!3.43e-26!70;CL:0000557!8.33e-26!71;CL:0000763!1.82e-21!112;CL:0000049!1.82e-21!112;CL:0000738!7.85e-17!140;CL:0002087!8.20e-15!119;CL:0002031!3.76e-14!124;CL:0002032!5.25e-14!165;CL:0000837!5.25e-14!165;CL:0000037!2.32e-13!172;CL:0000566!2.32e-13!172;CL:0000988!1.60e-12!182;CL:0002393!2.71e-12!9;CL:0002397!2.71e-12!9;CL:0000094!8.60e-07!8 | |ontology_enrichment_celltype=CL:0002057!2.39e-45!42;CL:0000860!3.17e-42!45;CL:0000766!2.44e-32!76;CL:0002194!3.13e-29!63;CL:0000576!3.13e-29!63;CL:0000040!3.13e-29!63;CL:0000559!3.13e-29!63;CL:0002009!2.69e-28!65;CL:0000839!3.43e-26!70;CL:0000557!8.33e-26!71;CL:0000763!1.82e-21!112;CL:0000049!1.82e-21!112;CL:0000738!7.85e-17!140;CL:0002087!8.20e-15!119;CL:0002031!3.76e-14!124;CL:0002032!5.25e-14!165;CL:0000837!5.25e-14!165;CL:0000037!2.32e-13!172;CL:0000566!2.32e-13!172;CL:0000988!1.60e-12!182;CL:0002393!2.71e-12!9;CL:0002397!2.71e-12!9;CL:0000094!8.60e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.30e-22;33!CL:0002057;9.30e-22;33!CL:0000473;6.64e-15;39!CL:0000234;6.64e-15;39!CL:0000576;2.74e-12;48!CL:0000766;2.71e-11;69!CL:0000767;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.44e-25,42;CL:0002057,1.44e-25,42;CL:0000473,2.24e-22,48;CL:0000234,2.24e-22,48;CL:0000766,4.00e-19,72;CL:0002194,6.73e-18,59;CL:0000576,6.73e-18,59;CL:0000040,6.73e-18,59;CL:0000559,6.73e-18,59;CL:0002009,2.55e-17,61;CL:0000839,5.05e-16,66;CL:0000557,8.70e-16,67;CL:0000763,9.34e-13,108;CL:0000049,9.34e-13,108;CL:0000738,4.23e-10,136;CL:0002087,3.38e-09,115;CL:0002031,8.27e-09,120;CL:0000767,1.21e-08,3;CL:0002032,1.70e-08,161;CL:0000837,1.70e-08,161;CL:0000037,3.94e-08,168;CL:0000988,1.06e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.86e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.30e-23!80;UBERON:0001474!4.48e-21!86;UBERON:0004765!9.94e-18!101;UBERON:0001434!9.94e-18!101;UBERON:0002390!1.53e-17!102;UBERON:0003061!1.53e-17!102;UBERON:0002193!7.75e-16!112;UBERON:0002405!2.20e-15!115;UBERON:0007190!1.09e-12!1;UBERON:0002204!4.50e-10!167;UBERON:0003081!2.21e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!9.30e-23!80;UBERON:0001474!4.48e-21!86;UBERON:0004765!9.94e-18!101;UBERON:0001434!9.94e-18!101;UBERON:0002390!1.53e-17!102;UBERON:0003061!1.53e-17!102;UBERON:0002193!7.75e-16!112;UBERON:0002405!2.20e-15!115;UBERON:0007190!1.09e-12!1;UBERON:0002204!4.50e-10!167;UBERON:0003081!2.21e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.22e-14,76;UBERON:0001474,6.44e-13,82;UBERON:0004765,9.03e-12,90;UBERON:0002405,2.17e-11,93;UBERON:0002390,8.29e-11,98;UBERON:0003061,8.29e-11,98;UBERON:0001434,1.37e-10,100;UBERON:0002193,8.43e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0,0,0,0,0,0,0,0,1.40381113229099,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,1.0246428261164,0,0,3.87290810150296,0,0,0.272906150057846,0,0,8.98601275813062,0.639337125799041,0,0,0,0,2.26954089876456,0,0,1.0429658368404,0,0,4.78760926783834,0,0,0.425208599930087,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0,0,0,0,0,0,0,0,1.40381113229099,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,1.0246428261164,0,0,3.87290810150296,0,0,0.272906150057846,0,0,8.98601275813062,0.639337125799041,0,0,0,0,2.26954089876456,0,0,1.0429658368404,0,0,4.78760926783834,0,0,0.425208599930087,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:65030399..65030409,+ | |short_description=p@chr5:65030399..65030409,+ | ||
}} | }} |
Latest revision as of 15:45, 30 July 2015
Short description: | p@chr5:65030399..65030409, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:65030399..65030409, + |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.44e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-25 | 42 |
defensive cell | 2.24e-22 | 48 |
phagocyte | 2.24e-22 | 48 |
myeloid leukocyte | 4.00e-19 | 72 |
monopoietic cell | 6.73e-18 | 59 |
monocyte | 6.73e-18 | 59 |
monoblast | 6.73e-18 | 59 |
promonocyte | 6.73e-18 | 59 |
macrophage dendritic cell progenitor | 2.55e-17 | 61 |
myeloid lineage restricted progenitor cell | 5.05e-16 | 66 |
granulocyte monocyte progenitor cell | 8.70e-16 | 67 |
myeloid cell | 9.34e-13 | 108 |
common myeloid progenitor | 9.34e-13 | 108 |
leukocyte | 4.23e-10 | 136 |
nongranular leukocyte | 3.38e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.27e-09 | 120 |
basophil | 1.21e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-08 | 161 |
hematopoietic stem cell | 3.94e-08 | 168 |
hematopoietic cell | 1.06e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.22e-14 | 76 |
bone element | 6.44e-13 | 82 |
skeletal element | 9.03e-12 | 90 |
immune system | 2.17e-11 | 93 |
hematopoietic system | 8.29e-11 | 98 |
blood island | 8.29e-11 | 98 |
skeletal system | 1.37e-10 | 100 |
hemolymphoid system | 8.43e-10 | 108 |