FFCP PHASE1:Hg19::chr5:56112822..56112834,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:56112822..56112834,+ | |||
|coexpression_cluster_id=C1886 | |||
|description=CAGE_peak_at_chr5:56112822..56112834,+ | |description=CAGE_peak_at_chr5:56112822..56112834,+ | ||
|id=chr5:56112822..56112834,+ | |id=chr5:56112822..56112834,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.44e-60!140;CL:0000037!9.12e-52!172;CL:0000566!9.12e-52!172;CL:0002087!6.40e-51!119;CL:0002031!2.75e-48!124;CL:0002032!2.80e-48!165;CL:0000837!2.80e-48!165;CL:0000988!1.03e-46!182;CL:0002057!2.32e-40!42;CL:0000766!2.33e-39!76;CL:0000860!5.39e-38!45;CL:0000557!4.45e-36!71;CL:0000839!3.06e-35!70;CL:0002194!3.98e-35!63;CL:0000576!3.98e-35!63;CL:0000040!3.98e-35!63;CL:0000559!3.98e-35!63;CL:0002009!4.19e-35!65;CL:0000763!9.74e-33!112;CL:0000049!9.74e-33!112;CL:0000542!1.81e-13!53;CL:0000051!1.81e-13!53;CL:0000838!5.23e-13!52;CL:0000134!8.50e-12!358;CL:0000945!3.16e-11!24;CL:0000826!3.16e-11!24;CL:0002393!4.50e-11!9;CL:0002397!4.50e-11!9;CL:0002320!6.08e-11!365;CL:0000219!5.79e-09!390;CL:0000236!7.82e-09!14 | |ontology_enrichment_celltype=CL:0000738!8.44e-60!140;CL:0000037!9.12e-52!172;CL:0000566!9.12e-52!172;CL:0002087!6.40e-51!119;CL:0002031!2.75e-48!124;CL:0002032!2.80e-48!165;CL:0000837!2.80e-48!165;CL:0000988!1.03e-46!182;CL:0002057!2.32e-40!42;CL:0000766!2.33e-39!76;CL:0000860!5.39e-38!45;CL:0000557!4.45e-36!71;CL:0000839!3.06e-35!70;CL:0002194!3.98e-35!63;CL:0000576!3.98e-35!63;CL:0000040!3.98e-35!63;CL:0000559!3.98e-35!63;CL:0002009!4.19e-35!65;CL:0000763!9.74e-33!112;CL:0000049!9.74e-33!112;CL:0000542!1.81e-13!53;CL:0000051!1.81e-13!53;CL:0000838!5.23e-13!52;CL:0000134!8.50e-12!358;CL:0000945!3.16e-11!24;CL:0000826!3.16e-11!24;CL:0002393!4.50e-11!9;CL:0002397!4.50e-11!9;CL:0002320!6.08e-11!365;CL:0000219!5.79e-09!390;CL:0000236!7.82e-09!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.28e-36;33!CL:0002057;5.28e-36;33!CL:0000576;1.35e-30;48!CL:0000473;1.30e-29;39!CL:0000234;1.30e-29;39!CL:0000766;3.72e-24;69!CL:0000236;7.58e-20;13!CL:0002393;1.44e-14;6!CL:0002397;1.44e-14;6!CL:0002087;5.38e-14;104!CL:0000875;2.97e-12;3!CL:0002396;2.97e-12;3!CL:0000767;2.04e-11;3!CL:0000738;2.28e-11;136!CL:0000226;1.43e-10;3!CL:0000842;1.43e-10;3!CL:0000945;5.77e-10;24!CL:0000763;8.60e-09;100!CL:0000094;3.88e-07;8!CL:0000988;6.41e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.05e-62,42;CL:0002057,4.05e-62,42;CL:0000473,3.90e-57,48;CL:0000234,3.90e-57,48;CL:0000738,1.40e-49,136;CL:0002087,4.66e-47,115;CL:0000766,2.50e-46,72;CL:0002194,4.11e-44,59;CL:0000576,4.11e-44,59;CL:0000040,4.11e-44,59;CL:0000559,4.11e-44,59;CL:0002009,1.97e-42,61;CL:0000839,1.13e-38,66;CL:0000037,4.69e-38,168;CL:0000557,5.47e-38,67;CL:0002031,6.04e-38,120;CL:0000988,1.47e-35,177;CL:0002032,1.14e-32,161;CL:0000837,1.14e-32,161;CL:0000763,4.03e-28,108;CL:0000049,4.03e-28,108;CL:0002393,1.24e-24,9;CL:0002397,1.24e-24,9;CL:0000236,2.37e-18,14;CL:0000875,2.98e-12,3;CL:0002396,2.98e-12,3;CL:0000134,3.26e-12,354;CL:0002320,9.24e-12,361;CL:0000767,1.30e-11,3;CL:0000226,1.21e-10,3;CL:0000842,1.21e-10,3;CL:0000219,3.58e-10,386;CL:0000945,5.44e-10,24;CL:0000826,5.44e-10,24;CL:0000048,7.34e-09,427;CL:0000723,1.39e-08,433;CL:0000034,3.17e-08,441;CL:0000094,2.80e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.29e-42;42!CL:0000049;5.28e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.47e-37!112;UBERON:0002390!5.15e-36!102;UBERON:0003061!5.15e-36!102;UBERON:0002371!8.90e-31!80;UBERON:0002405!1.48e-30!115;UBERON:0001474!4.17e-28!86;UBERON:0004765!7.77e-21!101;UBERON:0001434!7.77e-21!101;UBERON:0002384!3.81e-10!375;UBERON:0003081!1.13e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.18e-34,98;UBERON:0003061,8.18e-34,98;UBERON:0002371,1.26e-32,76;UBERON:0002193,6.86e-30,108;UBERON:0001474,1.07e-29,82;UBERON:0004765,2.12e-26,90;UBERON:0002405,2.62e-25,93;UBERON:0001434,5.11e-23,100;UBERON:0003081,6.21e-12,203;UBERON:0002384,3.81e-11,371;UBERON:0002204,7.30e-11,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.236132343941038,2.75354993794233,4.98978217526377,2.78669021968937,0,0,0,0.309868802321207,0.142169232487422,0,1.10799081706375,1.60435557976113,0.651032612147555,0,0,0.257575567634187,0.726991193897824,1.51150377475524,0.727752183563449,0.929716147622738,1.23350366406548,1.23882548358041,0.575384784644301,1.5369642391746,4.7296445977717,3.10271112662957,4.51839278508678,2.70852973188684,0.752969358170419,1.09162460023138,1.79778787556068,0.612167784741805,0.962787081228281,1.27867425159808,1.31940520074686,0.997318288108159,3.83602275479425,0.580418477257168,0,1.86846674698672,2.26123798731069,2.08593167368081,3.25783267057675,0.605399502633369,2.57794345191295,0.949387162322653,4.64761629886272,4.889898899196,4.19317291016752,2.13424399178341,1.95229960693958,5.14321877430656,7.41033133727246,7.55883373356542,10.4118567645841,3.51992488922645,0.546138611262131,1.77901850772711,1.28019066769952,2.00197993518006,1.72425731986345,2.64417949113945,4.77026877267682,1.1384259382189,0.587237189370939,4.96955196562797,0,0.560508562981536,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,1.5046784585161,0.977766799900771,0.473447805734733,0,0.668462741311041,2.06224135232386,1.99380505125259,5.1452734115353,0.768547918354051,0.910415432919148,0.986627427622057,0.276350017785848,1.73881851441031,0.14828656316206,0.267540828089713,0,1.58633079776593,0,0,2.27717722817553,0,0.651083453856419,0,0.451725357233318,1.15187950038977,0,0.236777252044017,0,0.604820229674197,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0.132957960518865,0.476981248610684,0.571994910780128,2.60020250930695,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.792435906119034,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.431255149719035,0.513372145118994,1.01637849688985,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,2.89475236572042,1.50999940573032,1.28073069364133,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0.962479855263359,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0.425846237690326,0.343505344755765,0.614481528616916,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.758238955541855,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.247247575143499,0.26961417541674,0.0984274815147488,0.508039992394707,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0.817826971279221,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0.357382720883282,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,1.1294608203896,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.657887425858975,0.45120521581504,0.399764623699716,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0.0636471582781649,0,0,0.342233301085281,0.471464371102113,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.236132343941038,2.75354993794233,4.98978217526377,2.78669021968937,0,0,0,0.309868802321207,0.142169232487422,0,1.10799081706375,1.60435557976113,0.651032612147555,0,0,0.257575567634187,0.726991193897824,1.51150377475524,0.727752183563449,0.929716147622738,1.23350366406548,1.23882548358041,0.575384784644301,1.5369642391746,4.7296445977717,3.10271112662957,4.51839278508678,2.70852973188684,0.752969358170419,1.09162460023138,1.79778787556068,0.612167784741805,0.962787081228281,1.27867425159808,1.31940520074686,0.997318288108159,3.83602275479425,0.580418477257168,0,1.86846674698672,2.26123798731069,2.08593167368081,3.25783267057675,0.605399502633369,2.57794345191295,0.949387162322653,4.64761629886272,4.889898899196,4.19317291016752,2.13424399178341,1.95229960693958,5.14321877430656,7.41033133727246,7.55883373356542,10.4118567645841,3.51992488922645,0.546138611262131,1.77901850772711,1.28019066769952,2.00197993518006,1.72425731986345,2.64417949113945,4.77026877267682,1.1384259382189,0.587237189370939,4.96955196562797,0,0.560508562981536,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,1.5046784585161,0.977766799900771,0.473447805734733,0,0.668462741311041,2.06224135232386,1.99380505125259,5.1452734115353,0.768547918354051,0.910415432919148,0.986627427622057,0.276350017785848,1.73881851441031,0.14828656316206,0.267540828089713,0,1.58633079776593,0,0,2.27717722817553,0,0.651083453856419,0,0.451725357233318,1.15187950038977,0,0.236777252044017,0,0.604820229674197,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0.132957960518865,0.476981248610684,0.571994910780128,2.60020250930695,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.792435906119034,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.431255149719035,0.513372145118994,1.01637849688985,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,2.89475236572042,1.50999940573032,1.28073069364133,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0.962479855263359,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0.425846237690326,0.343505344755765,0.614481528616916,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.758238955541855,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.247247575143499,0.26961417541674,0.0984274815147488,0.508039992394707,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0.817826971279221,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0.357382720883282,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,1.1294608203896,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.657887425858975,0.45120521581504,0.399764623699716,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0.0636471582781649,0,0,0.342233301085281,0.471464371102113,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:56112822..56112834,+ | |short_description=p@chr5:56112822..56112834,+ | ||
}} | }} |
Latest revision as of 15:23, 30 July 2015
Short description: | p@chr5:56112822..56112834, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:56112822..56112834, + |
Coexpression cluster: | C1886_CD14CD16_CD14_CD19_Basophils_CD133_renal_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.18e-34 | 98 |
blood island | 8.18e-34 | 98 |
bone marrow | 1.26e-32 | 76 |
hemolymphoid system | 6.86e-30 | 108 |
bone element | 1.07e-29 | 82 |
skeletal element | 2.12e-26 | 90 |
immune system | 2.62e-25 | 93 |
skeletal system | 5.11e-23 | 100 |
lateral plate mesoderm | 6.21e-12 | 203 |
connective tissue | 3.81e-11 | 371 |
musculoskeletal system | 7.30e-11 | 167 |