FFCP PHASE1:Hg19::chr5:54771166..54771206,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:54771166..54771206,+ | |||
|coexpression_cluster_id=C1962 | |||
|description=CAGE_peak_at_chr5:54771166..54771206,+ | |||
|id=chr5:54771166..54771206,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.28e-12!15;CL:0000057!1.17e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.48e-27;13!CL:0002334;6.44e-12;12!CL:0002615;3.29e-09;3!CL:0002579;1.80e-08;3!CL:0000135;2.64e-08;3!CL:0000388;2.64e-08;3!CL:0002521;6.22e-08;3!CL:0002580;6.22e-08;3!CL:0000153;2.89e-07;9!CL:0000447;2.89e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.09e-32,15;CL:0002334,4.38e-12,12;CL:0002615,3.17e-09,3;CL:0002579,1.69e-08,3;CL:0002521,2.78e-08,3;CL:0002580,2.78e-08,3;CL:0000135,4.78e-08,3;CL:0000388,4.78e-08,3;CL:0000057,1.96e-07,76;CL:0000153,2.33e-07,9;CL:0000447,2.33e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.37e-08!365;UBERON:0002100!5.75e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.86e-18;9!UBERON:0000042;1.86e-18;9!UBERON:0003688;5.58e-16;6!UBERON:0002358;5.58e-16;6!UBERON:0003684;5.58e-16;6!UBERON:0001178;5.58e-16;6!UBERON:0001443;1.41e-10;11!UBERON:0001013;2.22e-10;14!UBERON:0000310;7.09e-09;10!UBERON:0007846;2.64e-08;3!UBERON:0000043;2.64e-08;3!UBERON:0007845;2.64e-08;3!UBERON:0002190;6.22e-08;3!UBERON:0004905;1.10e-07;8!UBERON:0000982;1.10e-07;8!UBERON:0004770;1.10e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.07e-16,6;UBERON:0002358,5.07e-16,6;UBERON:0003684,5.07e-16,6;UBERON:0001178,5.07e-16,6;UBERON:0004457,1.84e-13,12;UBERON:0000042,1.84e-13,12;UBERON:0001443,6.57e-11,11;UBERON:0001013,1.47e-10,14;UBERON:0000310,4.47e-09,10;UBERON:0002190,2.78e-08,3;UBERON:0004905,4.17e-08,8;UBERON:0000982,4.17e-08,8;UBERON:0004770,4.17e-08,8;UBERON:0007846,4.78e-08,3;UBERON:0000043,4.78e-08,3;UBERON:0007845,4.78e-08,3;UBERON:0009569,3.13e-07,112 | |||
|phase1_expression=6.54042165374004,3.63970890614671,3.66481450649525,5.00366491765652,5.81049422755474,13.0850778615055,2.53299878168311,1.89515962028049,1.30592814099919,0.245733936501509,0,0.218441372130172,0,1.98026164736075,1.65698687863958,0.672325146451775,0.602694528023977,0,0.487932798790507,0.61560529038394,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0.164437904603676,0.552700035571697,0.869409257205157,0,0.535081656179426,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.767175371061182,1.44575660953827,2.50668955317945,4.34539556882471,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0.33472061276467,0.805658634218294,2.28081631715554,0.732186172644509,0,0,0,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0.759783069987479,0.264818361626438,0.573673241497627,0,1.12135520028461,0,1.48000529050296,1.24484414159907,0.942974704487816,0.817309515567294,0.756787138224657,0,0.468642863667593,0.312160076830321,0,0.747243402759005,0.117434498643765,0.323745888736263,0.280901613404497,0.816616685019573,0.245668634623536,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0,0,1.02088964844019,0.89694817844431,0.85422955527427,0.211931901159562,0.900273288253207,0.309157587715317,1.03056216018252,1.30281799432113,2.36286865137773,0.584622030967192,0.252433774244115,0.828449087780694,0.323292113637624,1.77504796258307,0.302256294682921,0.339121184620975,0,0.272746120590835,0.286804595389004,0,0,0.348581828608555,0.414644220061482,0,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0.982827216677626,2.36315962672562,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0.70445216541493,0.866198686566443,0,0.951270761172991,0,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0.268675568108545,0,0.383382679165211,0,1.23267807618516,0,0,0,0.126995788584338,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0.845302752556,0.531876233169741,3.12022310734098,1.02882949704857,0,0,1.28680194292333,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0.434343920002738,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.981531933753119,1.50051156317903,0.542530047399471,1.24782516918484,0.356857977594324,0.473107245101804,0.468565659970853,0.300946099727719,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0.106727557803444,0.303127571446259,0,0.604780586659361,2.23297027036899,1.53461973288062,1.68396056659844,2.43464383585832,4.60536524160033,1.28683136914886,1.48418066444991,0,0.177561725313127,0.164254312027618,1.03850885836724,0.464841513839837,0.120859449591622,0.200506470303285,0.368323955743585,0.34444334449382,0.182091168006717,0.524497659837696,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,0.170093705276516,0,0,0.812839312631559,1.00337954770971,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0,0,0.580024309752732,0.154048617114644,0.307007349452259,0,0.429680979473094,0.145016693914229,0,0.178064071293475,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0.464845549297286,0.31481234683064,0,0.924100740528266,0.532306030317022,0,0.55597265731176,0.572499546967965,0.372158369359667,0.316379424718726,0.953150969619124,0.511795582622668,0,0.318203247925937,0,1.07923474549989,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.545999645631943,0.707027159768564,1.13008116620243,0.551365343546124,1.32687795048244,0.438450885253763,1.15755106853338,0.655894752046633,0,0.92947049429925,0,0.573645408816206,0.491245205065606,0,0.709522128141196,9.92205885899021,3.95153871551882,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0.886860307073351,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.17206543417515,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,1.24415835064723,0.0898683511473268,0,0,0.690503839458535,0,0,0.969332746095218,0.278304294485554,0,0,0,3.62499787717397,0.227586896570999,0,0,0.344743373241465,0.291604613383254,0,0.885741385813839,0.120596438625408,0,0,0.591095237907095,0.219385397153973,0,0.139423744278603,0.461701551022782,0.797594390929008,0,0,0,1.5950057986596,0.366390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| |||
|short_description=p@chr5:54771166..54771206,+ | |||
}} |
Latest revision as of 15:17, 30 July 2015
Short description: | p@chr5:54771166..54771206, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:54771166..54771206, + |
Coexpression cluster: | C1962_Adipocyte_Synoviocyte_Mast_mature_tenocyte_Chondrocyte_leiomyoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.09e-32 | 15 |
preadipocyte | 4.38e-12 | 12 |
adipocyte of omentum tissue | 3.17e-09 | 3 |
omentum preadipocyte | 1.69e-08 | 3 |
subcutaneous fat cell | 2.78e-08 | 3 |
preadipocyte of the breast | 2.78e-08 | 3 |
fibrocyte | 4.78e-08 | 3 |
tendon cell | 4.78e-08 | 3 |
fibroblast | 1.96e-07 | 76 |
GAG secreting cell | 2.33e-07 | 9 |
carbohydrate secreting cell | 2.33e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.07e-16 | 6 |
peritoneum | 5.07e-16 | 6 |
abdominal cavity | 5.07e-16 | 6 |
visceral peritoneum | 5.07e-16 | 6 |
cavity lining | 1.84e-13 | 12 |
serous membrane | 1.84e-13 | 12 |
chest | 6.57e-11 | 11 |
adipose tissue | 1.47e-10 | 14 |
breast | 4.47e-09 | 10 |
subcutaneous adipose tissue | 2.78e-08 | 3 |
articulation | 4.17e-08 | 8 |
skeletal joint | 4.17e-08 | 8 |
articular system | 4.17e-08 | 8 |
dense regular connective tissue | 4.78e-08 | 3 |
tendon | 4.78e-08 | 3 |
regular connective tissue | 4.78e-08 | 3 |
subdivision of trunk | 3.13e-07 | 112 |