FFCP PHASE1:Hg19::chr5:54721817..54721840,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:54721817..54721840,- | |||
|coexpression_cluster_id=C1962 | |||
|description=CAGE_peak_at_chr5:54721817..54721840,- | |description=CAGE_peak_at_chr5:54721817..54721840,- | ||
|id=chr5:54721817..54721840,- | |id=chr5:54721817..54721840,- | ||
|ontology_enrichment_celltype=CL:0000136!5.86e-11!15 | |ontology_enrichment_celltype=CL:0000136!5.86e-11!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.08e-30;13!CL:0002615;7.29e-12;3!CL:0002617;1.68e-08;2!CL:0002334;6.12e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.45e-36,15;CL:0002615,6.86e-12,3;CL:0002617,1.69e-08,2;CL:0002334,5.06e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.48e-13!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.69e-19;9!UBERON:0000042;2.69e-19;9!UBERON:0003688;3.21e-15;6!UBERON:0002358;3.21e-15;6!UBERON:0003684;3.21e-15;6!UBERON:0001178;3.21e-15;6!UBERON:0001013;7.93e-11;14!UBERON:0004905;8.77e-11;8!UBERON:0000982;8.77e-11;8!UBERON:0004770;8.77e-11;8!UBERON:0000310;9.97e-09;10!UBERON:0005406;5.10e-08;2!UBERON:0001443;6.74e-08;11!UBERON:0002081;2.07e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.25e-15,6;UBERON:0002358,3.25e-15,6;UBERON:0003684,3.25e-15,6;UBERON:0001178,3.25e-15,6;UBERON:0004457,3.50e-14,12;UBERON:0000042,3.50e-14,12;UBERON:0001013,9.57e-11,14;UBERON:0004905,9.70e-11,8;UBERON:0000982,9.70e-11,8;UBERON:0004770,9.70e-11,8;UBERON:0000310,7.29e-09,10;UBERON:0005406,4.39e-08,2;UBERON:0001443,5.09e-08,11;UBERON:0002081,1.83e-07,2;UBERON:0010227,1.83e-07,2 | |||
|phase1_expression=3.81524596468169,6.20891519283851,2.53717927372748,9.00659685178174,8.49226079411847,11.3404008133048,2.53299878168311,0,1.04474251279935,0,0,0,0,0.618831764800233,2.31978163009541,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0.552700035571697,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.0843174571537,0.50133791063589,3.0417768981773,0,0.973269740605272,0,0.221729397462564,0,0.261958150995425,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,0,0,0,1.49091585508596,0.506522046658319,0.132409180813219,0.286836620748814,0.709336764396714,0.560677600142307,0,0.49333509683432,0,1.34710672069688,0.326923806226917,0.605429710579726,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0.516628905878827,0,0.741800787835671,0,0,0,0,0,0,0,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0.600182192168805,0.618315175430633,1.03056216018252,0.37223371266318,0.337552664482532,0.584622030967192,0.252433774244115,0.184099797284599,0.323292113637624,2.84007674013291,0.302256294682921,0,0,0,0.286804595389004,0.487894824518382,0.530119073285941,0.580969714347592,0.621966330092223,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,2.53510069643662,0,0.590789906681404,0.882926198829301,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0.528290604079356,0.207328115540772,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.428933980974443,2.71310802695722,0,0.65147236858747,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0.479249710983165,0,1.42636905040718,0.434343920002738,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.10422342547226,1.50051156317903,0.542530047399471,0,1.42743191037729,0,0,0,2.27407504055985,2.0694614258501,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0.907170879989041,1.73675465473144,0,2.52594084989766,2.17836553734692,2.55853624533352,0.64341568457443,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.464841513839837,0.483437798366489,0.200506470303285,0,0.34444334449382,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.721287081534056,0,0,0.574265537996172,0,0,0.193341436584244,0.462145851343933,0.15350367472613,0,0.107420244868274,0.145016693914229,0.255679882248303,0.267096106940212,0.330569830721956,0.576570202095319,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,1.00187420719394,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0.353437207037059,0.202182481573316,0,0,0,0.487426979262569,0,0,0.848432591722276,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,6.96655196482292,4.61012850143863,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.996239941255349,0.552567831062295,0,0,0,0.622079175323615,0,0.179021174675609,0,0.986434056369336,0,0,0,0.463840490809256,0,0,0,2.89999830173917,0.227586896570999,0.254253650292766,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0.886642856860642,0,0,0,0.615602068030377,0.227884111694002,0,0,0,0.31900115973192,0.549585560411174,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0.141353071433941,0.216388639742091,0,1.23840590304675,0.611030144933625,0,0,0,0.404406797884062,0,0.234264445725339,0.182454789215666,0,0,0.394584402849391,0,0,0,0.60129367765797,0.207376382794494,0,0,0,0,0,0.277349346026277,0,0,0,1.22308667769421,0.171986032471617,0,0,0.0821154570532092,0.290967049465258,0.0882561266915003,0.677942222341597,0,0,0,0,0,1.06726497369676,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0.203996435272644,0,0.600420288709789,0.547621515567972,0,0.429765441419957,0,0.558564802544508,0.916641696046735,1.43574604915363,0.599037001496973,0,0.223171457441873,0.335917362433631,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0.964518890790115,0.412618309791701,1.24632101408756,0.2249738915515,0,0.121499113316049,0.335434687599266,0.551639951094387,0.209818352539992,0.105600336519406,0,0,1.42939065274673,0.662091970365432,0.5085370753095,2.17199840701485,0,0.979762080328227,0,0,0.170388021785422,0,1.90517903781507,0,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0.314408610199332,0,1.9846640872478,0.197611631897944,0,0,1.08803560673895,0.7520696820681,1.53172788381731,1.31149052283922,0,0,2.44052529803926,0.250381861413,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,0,0,0.298509605773748,0,0,0,0.251567901752575,1.77962244319307,0.915360273587694,0.151230923763239,0.15543720058278,0.147855149989634,0.318593534327405,0,0.310525913752519,0.414706207840855,0,0,0,0.761610424337591,0,0.363697318405119,0.214821114084977,0.464033759878494,1.99047944349308,0.400027764663154,1.71697852591396,1.01024846629776,0,0,0,0,0.226705925512272,0,0,0.537266523244462,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0.389720617678777,0.132864840313363,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0.705351887381368,2.7562092961788,0.128458450192919,0,0.478901577171454,0.615349092722265,0,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0.366857197043358,0.115525666150338,0,0,0.198916222116275,0.300841313397029,0,0,0,0.163771917510097,0,0.202612753855184,0.781078098613847,0.413373593002368,0.253663240775627,0,0,1.48863353516788,0.175871244359621,0.127762427639595,0,0,0,0,0.354809480650555,0,0,0.203909198930495,0.0657727735628491,0,0,0.78493092850514,0.314231179832004,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0.414432328326074,0.6828739083758,0,0,0,0,0.423387050190929,0.4582137370881,0.62041277132864,0,0,0,0.121917924982269,0.647428837187895,0.410651227424988,0,0,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0.385870790539723,0.655678681511872,0,0.490296643507811,0.235676547101626,0.785233868459781,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.203974470572744,0,1.5870805215462,0.743990036333503,1.84870251452567,1.29787968637137,0.252332849670158,0.327796715891087,0.126698501011437,0.917899467677836,0.534434810531121,0.275684698604535,0.250707539292375,1.51557396436479,0.267964130156178,0,0.724030971033267,0.213233981900981,0.23806443146374,0.193766729508018,0.186224142887574,0.112131862580613,0.25458863311266,0.404234377916439,0.435433495793923,0.342233301085281,0.0673520530145875,0.358611026963382,0,0.0814032686109745,0,0,0.0898252021065869,0,0.244482888365733,0.406896178315738,0,0.603821380773079,0 | |phase1_expression=3.81524596468169,6.20891519283851,2.53717927372748,9.00659685178174,8.49226079411847,11.3404008133048,2.53299878168311,0,1.04474251279935,0,0,0,0,0.618831764800233,2.31978163009541,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0.552700035571697,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.0843174571537,0.50133791063589,3.0417768981773,0,0.973269740605272,0,0.221729397462564,0,0.261958150995425,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,0,0,0,1.49091585508596,0.506522046658319,0.132409180813219,0.286836620748814,0.709336764396714,0.560677600142307,0,0.49333509683432,0,1.34710672069688,0.326923806226917,0.605429710579726,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0.516628905878827,0,0.741800787835671,0,0,0,0,0,0,0,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0.600182192168805,0.618315175430633,1.03056216018252,0.37223371266318,0.337552664482532,0.584622030967192,0.252433774244115,0.184099797284599,0.323292113637624,2.84007674013291,0.302256294682921,0,0,0,0.286804595389004,0.487894824518382,0.530119073285941,0.580969714347592,0.621966330092223,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,2.53510069643662,0,0.590789906681404,0.882926198829301,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0.528290604079356,0.207328115540772,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.428933980974443,2.71310802695722,0,0.65147236858747,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0.479249710983165,0,1.42636905040718,0.434343920002738,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.10422342547226,1.50051156317903,0.542530047399471,0,1.42743191037729,0,0,0,2.27407504055985,2.0694614258501,0,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0.907170879989041,1.73675465473144,0,2.52594084989766,2.17836553734692,2.55853624533352,0.64341568457443,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.464841513839837,0.483437798366489,0.200506470303285,0,0.34444334449382,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.721287081534056,0,0,0.574265537996172,0,0,0.193341436584244,0.462145851343933,0.15350367472613,0,0.107420244868274,0.145016693914229,0.255679882248303,0.267096106940212,0.330569830721956,0.576570202095319,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,1.00187420719394,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0.353437207037059,0.202182481573316,0,0,0,0.487426979262569,0,0,0.848432591722276,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,6.96655196482292,4.61012850143863,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.996239941255349,0.552567831062295,0,0,0,0.622079175323615,0,0.179021174675609,0,0.986434056369336,0,0,0,0.463840490809256,0,0,0,2.89999830173917,0.227586896570999,0.254253650292766,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0.886642856860642,0,0,0,0.615602068030377,0.227884111694002,0,0,0,0.31900115973192,0.549585560411174,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0.141353071433941,0.216388639742091,0,1.23840590304675,0.611030144933625,0,0,0,0.404406797884062,0,0.234264445725339,0.182454789215666,0,0,0.394584402849391,0,0,0,0.60129367765797,0.207376382794494,0,0,0,0,0,0.277349346026277,0,0,0,1.22308667769421,0.171986032471617,0,0,0.0821154570532092,0.290967049465258,0.0882561266915003,0.677942222341597,0,0,0,0,0,1.06726497369676,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0.203996435272644,0,0.600420288709789,0.547621515567972,0,0.429765441419957,0,0.558564802544508,0.916641696046735,1.43574604915363,0.599037001496973,0,0.223171457441873,0.335917362433631,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0.964518890790115,0.412618309791701,1.24632101408756,0.2249738915515,0,0.121499113316049,0.335434687599266,0.551639951094387,0.209818352539992,0.105600336519406,0,0,1.42939065274673,0.662091970365432,0.5085370753095,2.17199840701485,0,0.979762080328227,0,0,0.170388021785422,0,1.90517903781507,0,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0.314408610199332,0,1.9846640872478,0.197611631897944,0,0,1.08803560673895,0.7520696820681,1.53172788381731,1.31149052283922,0,0,2.44052529803926,0.250381861413,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,0,0,0.298509605773748,0,0,0,0.251567901752575,1.77962244319307,0.915360273587694,0.151230923763239,0.15543720058278,0.147855149989634,0.318593534327405,0,0.310525913752519,0.414706207840855,0,0,0,0.761610424337591,0,0.363697318405119,0.214821114084977,0.464033759878494,1.99047944349308,0.400027764663154,1.71697852591396,1.01024846629776,0,0,0,0,0.226705925512272,0,0,0.537266523244462,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0.389720617678777,0.132864840313363,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0.705351887381368,2.7562092961788,0.128458450192919,0,0.478901577171454,0.615349092722265,0,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0.366857197043358,0.115525666150338,0,0,0.198916222116275,0.300841313397029,0,0,0,0.163771917510097,0,0.202612753855184,0.781078098613847,0.413373593002368,0.253663240775627,0,0,1.48863353516788,0.175871244359621,0.127762427639595,0,0,0,0,0.354809480650555,0,0,0.203909198930495,0.0657727735628491,0,0,0.78493092850514,0.314231179832004,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0.414432328326074,0.6828739083758,0,0,0,0,0.423387050190929,0.4582137370881,0.62041277132864,0,0,0,0.121917924982269,0.647428837187895,0.410651227424988,0,0,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0.385870790539723,0.655678681511872,0,0.490296643507811,0.235676547101626,0.785233868459781,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.203974470572744,0,1.5870805215462,0.743990036333503,1.84870251452567,1.29787968637137,0.252332849670158,0.327796715891087,0.126698501011437,0.917899467677836,0.534434810531121,0.275684698604535,0.250707539292375,1.51557396436479,0.267964130156178,0,0.724030971033267,0.213233981900981,0.23806443146374,0.193766729508018,0.186224142887574,0.112131862580613,0.25458863311266,0.404234377916439,0.435433495793923,0.342233301085281,0.0673520530145875,0.358611026963382,0,0.0814032686109745,0,0,0.0898252021065869,0,0.244482888365733,0.406896178315738,0,0.603821380773079,0 | ||
|short_description=p@chr5:54721817..54721840,- | |short_description=p@chr5:54721817..54721840,- | ||
}} | }} |
Latest revision as of 15:17, 30 July 2015
Short description: | p@chr5:54721817..54721840, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:54721817..54721840, - |
Coexpression cluster: | C1962_Adipocyte_Synoviocyte_Mast_mature_tenocyte_Chondrocyte_leiomyoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.45e-36 | 15 |
adipocyte of omentum tissue | 6.86e-12 | 3 |
adipocyte of breast | 1.69e-08 | 2 |
preadipocyte | 5.06e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.25e-15 | 6 |
peritoneum | 3.25e-15 | 6 |
abdominal cavity | 3.25e-15 | 6 |
visceral peritoneum | 3.25e-15 | 6 |
cavity lining | 3.50e-14 | 12 |
serous membrane | 3.50e-14 | 12 |
adipose tissue | 9.57e-11 | 14 |
articulation | 9.70e-11 | 8 |
skeletal joint | 9.70e-11 | 8 |
articular system | 9.70e-11 | 8 |
breast | 7.29e-09 | 10 |
perirenal fat | 4.39e-08 | 2 |
chest | 5.09e-08 | 11 |
cardiac atrium | 1.83e-07 | 2 |
future cardiac atrium | 1.83e-07 | 2 |