FFCP PHASE1:Hg19::chr5:54275165..54275184,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:54275165..54275184,- | |||
|coexpression_cluster_id=C1278 | |coexpression_cluster_id=C1278 | ||
|description=CAGE_peak_at_chr5:54275165..54275184,- | |description=CAGE_peak_at_chr5:54275165..54275184,- | ||
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|ontology_enrichment_celltype_v019_2=CL:0002545,7.65e-23,2;CL:0002595,3.24e-21,5;CL:0002573,5.38e-16,2;CL:1000413,1.13e-11,9;CL:0000359,1.00e-08,32;CL:0002544,3.02e-08,6;CL:0000222,6.81e-08,121;CL:0002593,4.56e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4231;9.01e-07;2!DOID:1907;9.01e-07;2 | |ontology_enrichment_disease_v019=DOID:4231;9.01e-07;2!DOID:1907;9.01e-07;2 | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr5:54275165..54275184,- | |short_description=p@chr5:54275165..54275184,- | ||
}} | }} |
Latest revision as of 15:15, 30 July 2015
Short description: | p@chr5:54275165..54275184, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:54275165..54275184, - |
Coexpression cluster: | C1278_Smooth_Endothelial_osteosarcoma_schwannoma_large_Renal_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 7.65e-23 | 2 |
smooth muscle cell of the subclavian artery | 3.24e-21 | 5 |
Schwann cell | 5.38e-16 | 2 |
endothelial cell of artery | 1.13e-11 | 9 |
vascular associated smooth muscle cell | 1.00e-08 | 32 |
aortic endothelial cell | 3.02e-08 | 6 |
mesodermal cell | 6.81e-08 | 121 |
smooth muscle cell of the internal thoracic artery | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
segment of aorta | 7.65e-23 | 2 |
thoracic aorta | 7.65e-23 | 2 |
thoracic segment blood vessel | 3.24e-21 | 5 |
subclavian artery | 3.24e-21 | 5 |
artery | 3.78e-16 | 42 |
arterial blood vessel | 3.78e-16 | 42 |
arterial system | 3.78e-16 | 42 |
systemic artery | 6.01e-16 | 33 |
systemic arterial system | 6.01e-16 | 33 |
trunk blood vessel | 2.46e-15 | 7 |
endothelial tube | 1.13e-11 | 9 |
arterial system endothelium | 1.13e-11 | 9 |
endothelium of artery | 1.13e-11 | 9 |
epithelial tube open at both ends | 3.04e-11 | 59 |
blood vessel | 3.04e-11 | 59 |
blood vasculature | 3.04e-11 | 59 |
vascular cord | 3.04e-11 | 59 |
splanchnic layer of lateral plate mesoderm | 9.66e-10 | 83 |
vessel | 1.23e-09 | 68 |
aorta | 1.31e-08 | 21 |
aortic system | 1.31e-08 | 21 |
vasculature | 2.79e-08 | 78 |
vascular system | 2.79e-08 | 78 |
epithelial tube | 3.49e-08 | 117 |
thoracic segment of trunk | 2.11e-07 | 52 |
cardiovascular system | 3.84e-07 | 109 |
internal thoracic artery | 4.56e-07 | 2 |
circulatory system | 6.41e-07 | 112 |