FFCP PHASE1:Hg19::chr5:52786654..52786665,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:52786654..52786665,- | |||
|coexpression_cluster_id=C414 | |||
|description=CAGE_peak_at_chr5:52786654..52786665,- | |description=CAGE_peak_at_chr5:52786654..52786665,- | ||
|id=chr5:52786654..52786665,- | |id=chr5:52786654..52786665,- | ||
|ontology_enrichment_celltype=CL:0002620!2.41e-14!23;CL:0000055!1.02e-11!180;CL:0000057!1.26e-11!75;CL:0002580!1.96e-10!3;CL:0000710!3.18e-08!20;CL:0000075!3.10e-07!27;CL:0002077!5.90e-07!33 | |ontology_enrichment_celltype=CL:0002620!2.41e-14!23;CL:0000055!1.02e-11!180;CL:0000057!1.26e-11!75;CL:0002580!1.96e-10!3;CL:0000710!3.18e-08!20;CL:0000075!3.10e-07!27;CL:0002077!5.90e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:1000306;7.14e-26;4!CL:0002547;7.14e-26;4!CL:0000182;1.22e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,7.14e-26,4;CL:0002547,7.14e-26,4;CL:0000182,1.22e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-10;11!UBERON:0009497;5.28e-09;13 | |||
|ontology_enrichment_disease=DOID:17!3.55e-16!5;DOID:450!3.55e-16!5;DOID:66!3.55e-16!5;DOID:423!3.55e-16!5;DOID:0080000!3.55e-16!5;DOID:11722!3.55e-16!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!1.32e-08!40;UBERON:0002199!2.29e-07!45;UBERON:0002416!2.29e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;9.37e-99;1!UBERON:0009842;9.37e-99;1!UBERON:0003704;9.37e-99;1!UBERON:0001171;9.37e-99;1!UBERON:0001172;9.37e-99;1!UBERON:0001280;4.27e-34;3!UBERON:0004647;4.27e-34;3!UBERON:0002394;5.56e-26;4!UBERON:0003928;5.56e-26;4!UBERON:0004797;7.14e-26;4!UBERON:0000415;7.14e-26;4!UBERON:0007240;7.14e-26;4!UBERON:0005742;7.14e-26;4!UBERON:0005734;7.14e-26;4!UBERON:0004664;7.14e-26;4!UBERON:0004663;7.14e-26;4!UBERON:0002294;1.65e-15;7!UBERON:0001173;1.65e-15;7!UBERON:0000058;2.73e-11;10!UBERON:0000353;5.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,9.37e-99,1;UBERON:0009842,9.37e-99,1;UBERON:0003704,9.37e-99,1;UBERON:0001171,9.37e-99,1;UBERON:0001172,9.37e-99,1;UBERON:0001280,4.27e-34,3;UBERON:0004647,4.27e-34,3;UBERON:0005171,4.27e-34,3;UBERON:0000415,7.14e-26,4;UBERON:0007240,7.14e-26,4;UBERON:0005742,7.14e-26,4;UBERON:0005734,7.14e-26,4;UBERON:0004664,7.14e-26,4;UBERON:0004663,7.14e-26,4;UBERON:0002394,7.67e-18,6;UBERON:0003928,7.67e-18,6;UBERON:0004797,1.91e-15,7;UBERON:0002294,2.19e-12,9;UBERON:0001173,2.19e-12,9;UBERON:0004912,2.19e-12,9;UBERON:0000353,5.55e-08,15 | |||
|phase1_expression=0.726713517082227,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0.89694817844431,0.427114777637135,0.423863802319124,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0,0.184099797284599,0.323292113637624,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91295885868911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.236349546921671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.726713517082227,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0.89694817844431,0.427114777637135,0.423863802319124,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0,0.184099797284599,0.323292113637624,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91295885868911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.236349546921671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:52786654..52786665,- | |short_description=p@chr5:52786654..52786665,- | ||
}} | }} |
Latest revision as of 15:11, 30 July 2015
Short description: | p@chr5:52786654..52786665, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:52786654..52786665, - |
Coexpression cluster: | C414_cholangiocellular_testis_gall_pagetoid_mesothelioma_thyroid_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 7.14e-26 | 4 |
fibroblast of the aortic adventitia | 7.14e-26 | 4 |
hepatocyte | 1.22e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 9.37e-99 | 1 |
acinus | 9.37e-99 | 1 |
intrahepatic bile duct | 9.37e-99 | 1 |
portal lobule | 9.37e-99 | 1 |
hepatic acinus | 9.37e-99 | 1 |
liver parenchyma | 4.27e-34 | 3 |
liver lobule | 4.27e-34 | 3 |
hepatic duct | 4.27e-34 | 3 |
artery wall | 7.14e-26 | 4 |
tunica adventitia of artery | 7.14e-26 | 4 |
adventitia | 7.14e-26 | 4 |
tunica adventitia of blood vessel | 7.14e-26 | 4 |
aorta tunica adventitia | 7.14e-26 | 4 |
aorta wall | 7.14e-26 | 4 |
bile duct | 7.67e-18 | 6 |
digestive system duct | 7.67e-18 | 6 |
blood vessel layer | 1.91e-15 | 7 |
biliary system | 2.19e-12 | 9 |
biliary tree | 2.19e-12 | 9 |
biliary bud | 2.19e-12 | 9 |
parenchyma | 5.55e-08 | 15 |