FFCP PHASE1:Hg19::chr5:42993321..42993352,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=82bp_to_uc003jnb.1_5end | |association_with_transcript=82bp_to_uc003jnb.1_5end | ||
|cluster_id=chr5:42993321..42993352,- | |||
|coexpression_cluster_id=C4502 | |||
|description=CAGE_peak_2_at_uc003jnb.1_5end | |description=CAGE_peak_2_at_uc003jnb.1_5end | ||
|id=chr5:42993321..42993352,- | |id=chr5:42993321..42993352,- | ||
|ontology_enrichment_celltype=CL:0002057!5.36e-27!42;CL:0000860!2.90e-26!45;CL:0000766!4.00e-25!76;CL:0002194!1.19e-22!63;CL:0000576!1.19e-22!63;CL:0000040!1.19e-22!63;CL:0000559!1.19e-22!63;CL:0000048!2.03e-22!430;CL:0002320!2.22e-21!365;CL:0000723!3.22e-21!436;CL:0002009!6.48e-21!65;CL:0000034!9.02e-21!444;CL:0000839!4.04e-20!70;CL:0000557!9.91e-20!71;CL:0000134!1.12e-19!358;CL:0002371!1.52e-15!591;CL:0000763!2.26e-15!112;CL:0000049!2.26e-15!112;CL:0000219!1.76e-14!390;CL:0002087!4.77e-12!119;CL:0000738!8.60e-12!140;CL:0000144!1.47e-10!625;CL:0000003!4.42e-10!722;CL:0002031!5.30e-10!124;CL:0000037!8.73e-10!172;CL:0000566!8.73e-10!172;CL:0002032!1.84e-09!165;CL:0000837!1.84e-09!165;CL:0000988!4.12e-09!182;CL:0000012!6.12e-08!682;CL:0000548!3.56e-07!679;CL:0000004!3.56e-07!679;CL:0000255!3.56e-07!679 | |ontology_enrichment_celltype=CL:0002057!5.36e-27!42;CL:0000860!2.90e-26!45;CL:0000766!4.00e-25!76;CL:0002194!1.19e-22!63;CL:0000576!1.19e-22!63;CL:0000040!1.19e-22!63;CL:0000559!1.19e-22!63;CL:0000048!2.03e-22!430;CL:0002320!2.22e-21!365;CL:0000723!3.22e-21!436;CL:0002009!6.48e-21!65;CL:0000034!9.02e-21!444;CL:0000839!4.04e-20!70;CL:0000557!9.91e-20!71;CL:0000134!1.12e-19!358;CL:0002371!1.52e-15!591;CL:0000763!2.26e-15!112;CL:0000049!2.26e-15!112;CL:0000219!1.76e-14!390;CL:0002087!4.77e-12!119;CL:0000738!8.60e-12!140;CL:0000144!1.47e-10!625;CL:0000003!4.42e-10!722;CL:0002031!5.30e-10!124;CL:0000037!8.73e-10!172;CL:0000566!8.73e-10!172;CL:0002032!1.84e-09!165;CL:0000837!1.84e-09!165;CL:0000988!4.12e-09!182;CL:0000012!6.12e-08!682;CL:0000548!3.56e-07!679;CL:0000004!3.56e-07!679;CL:0000255!3.56e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.98e-32;33!CL:0002057;6.98e-32;33!CL:0000576;6.30e-24;48!CL:0000473;1.05e-23;39!CL:0000234;1.05e-23;39!CL:0000766;2.74e-16;69!CL:0000763;7.68e-09;100!CL:0000094;5.35e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.26e-40,42;CL:0002057,1.26e-40,42;CL:0000473,1.66e-36,48;CL:0000234,1.66e-36,48;CL:0000766,1.08e-32,72;CL:0002194,4.13e-30,59;CL:0000576,4.13e-30,59;CL:0000040,4.13e-30,59;CL:0000559,4.13e-30,59;CL:0002009,1.66e-28,61;CL:0000557,1.23e-25,67;CL:0000839,6.09e-25,66;CL:0000763,3.04e-21,108;CL:0000049,3.04e-21,108;CL:0000048,5.66e-18,427;CL:0000034,1.67e-17,441;CL:0000723,4.55e-17,433;CL:0000738,1.44e-16,136;CL:0002320,1.86e-16,361;CL:0002087,4.89e-16,115;CL:0000134,1.80e-15,354;CL:0000037,1.60e-13,168;CL:0002032,2.97e-13,161;CL:0000837,2.97e-13,161;CL:0000219,1.27e-12,386;CL:0002031,1.73e-12,120;CL:0000988,1.08e-11,177;CL:0000094,3.70e-08,8;CL:0002393,2.73e-07,9;CL:0002397,2.73e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.16e-29;42!CL:0000049;4.46e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.68e-24!112;UBERON:0002390!1.80e-21!102;UBERON:0003061!1.80e-21!102;UBERON:0004765!3.64e-20!101;UBERON:0001434!3.64e-20!101;UBERON:0002384!4.96e-20!375;UBERON:0002371!8.53e-20!80;UBERON:0002405!1.64e-19!115;UBERON:0001474!4.28e-19!86;UBERON:0002204!1.19e-17!167;UBERON:0003081!2.56e-11!216;UBERON:0000926!2.55e-09!448;UBERON:0004120!2.55e-09!448;UBERON:0006603!2.55e-09!448 | |ontology_enrichment_uberon=UBERON:0002193!3.68e-24!112;UBERON:0002390!1.80e-21!102;UBERON:0003061!1.80e-21!102;UBERON:0004765!3.64e-20!101;UBERON:0001434!3.64e-20!101;UBERON:0002384!4.96e-20!375;UBERON:0002371!8.53e-20!80;UBERON:0002405!1.64e-19!115;UBERON:0001474!4.28e-19!86;UBERON:0002204!1.19e-17!167;UBERON:0003081!2.56e-11!216;UBERON:0000926!2.55e-09!448;UBERON:0004120!2.55e-09!448;UBERON:0006603!2.55e-09!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.68e-27,108;UBERON:0002390,2.74e-25,98;UBERON:0003061,2.74e-25,98;UBERON:0002371,1.75e-23,76;UBERON:0002405,7.65e-23,93;UBERON:0004765,7.88e-22,90;UBERON:0001474,1.22e-21,82;UBERON:0001434,6.01e-20,100;UBERON:0002204,5.60e-17,167;UBERON:0002384,2.60e-16,371;UBERON:0003081,1.03e-15,203;UBERON:0000926,1.77e-13,315;UBERON:0004120,1.77e-13,315;UBERON:0006603,1.77e-13,315 | |||
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|short_description=p2@uc003jnb.1 | |short_description=p2@uc003jnb.1 | ||
}} | }} |
Latest revision as of 14:56, 30 July 2015
Short description: | p2@uc003jnb.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc003jnb.1_5end |
Coexpression cluster: | C4502_CD14_large_alveolar_embryonic_clear_acute_bronchogenic |
Association with transcript: | 82bp_to_uc003jnb.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.68e-27 | 108 |
hematopoietic system | 2.74e-25 | 98 |
blood island | 2.74e-25 | 98 |
bone marrow | 1.75e-23 | 76 |
immune system | 7.65e-23 | 93 |
skeletal element | 7.88e-22 | 90 |
bone element | 1.22e-21 | 82 |
skeletal system | 6.01e-20 | 100 |
musculoskeletal system | 5.60e-17 | 167 |
connective tissue | 2.60e-16 | 371 |
lateral plate mesoderm | 1.03e-15 | 203 |
mesoderm | 1.77e-13 | 315 |
mesoderm-derived structure | 1.77e-13 | 315 |
presumptive mesoderm | 1.77e-13 | 315 |