FFCP PHASE1:Hg19::chr5:42800558..42800572,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:42800558..42800572,- | |||
|coexpression_cluster_id=C951 | |||
|description=CAGE_peak_at_chr5:42800558..42800572,- | |description=CAGE_peak_at_chr5:42800558..42800572,- | ||
|id=chr5:42800558..42800572,- | |id=chr5:42800558..42800572,- | ||
|ontology_enrichment_celltype=CL:0000181!4.49e-08!12;CL:0000417!4.49e-08!12;CL:0000668!4.49e-08!12;CL:0000414!4.49e-08!12;CL:0000412!4.49e-08!12;CL:0000182!4.49e-08!12 | |ontology_enrichment_celltype=CL:0000181!4.49e-08!12;CL:0000417!4.49e-08!12;CL:0000668!4.49e-08!12;CL:0000414!4.49e-08!12;CL:0000412!4.49e-08!12;CL:0000182!4.49e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.30e-14;3!CL:0000235;1.07e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.65e-14,3;CL:0000235,9.57e-13,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.29e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000125;2.29e-12;9!UBERON:0002308;2.29e-12;9!UBERON:0001897;3.84e-10;2!UBERON:0010225;3.84e-10;2!UBERON:0002148;5.29e-10;2!UBERON:0006331;5.29e-10;2!UBERON:0009662;5.29e-10;2!UBERON:0001875;1.14e-09;2!UBERON:0006514;1.14e-09;2!UBERON:0002108;1.17e-08;4!UBERON:0002107;3.21e-08;19!UBERON:0006925;3.21e-08;19!UBERON:0002298;3.23e-07;6!UBERON:0000988;6.16e-07;3!UBERON:0006947;6.16e-07;3!UBERON:0004054;6.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,1.46e-12,9;UBERON:0002308,1.46e-12,9;UBERON:0007023,2.43e-12,114;UBERON:0002148,3.36e-10,2;UBERON:0006331,3.36e-10,2;UBERON:0009662,3.36e-10,2;UBERON:0001897,3.52e-10,2;UBERON:0010225,3.52e-10,2;UBERON:0001875,7.97e-10,2;UBERON:0006514,7.97e-10,2;UBERON:0002108,1.31e-08,4;UBERON:0002107,2.93e-08,19;UBERON:0006925,2.93e-08,19;UBERON:0008836,2.93e-08,19;UBERON:0001049,2.40e-07,56;UBERON:0005068,2.40e-07,56;UBERON:0006241,2.40e-07,56;UBERON:0007135,2.40e-07,56;UBERON:0002298,2.84e-07,6;UBERON:0000988,4.57e-07,3;UBERON:0008835,4.81e-07,22;UBERON:0003894,4.81e-07,22;UBERON:0006947,7.17e-07,3;UBERON:0004054,7.17e-07,3 | |||
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|short_description=p@chr5:42800558..42800572,- | |short_description=p@chr5:42800558..42800572,- | ||
}} | }} |
Latest revision as of 14:53, 30 July 2015
Short description: | p@chr5:42800558..42800572, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:42800558..42800572, - |
Coexpression cluster: | C951_CD14_Hepatocyte_liver_small_Monocytederived_substantia_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.65e-14 | 3 |
macrophage | 9.57e-13 | 6 |
Ontology term | p-value | n |
---|---|---|
neural nucleus | 1.46e-12 | 9 |
nucleus of brain | 1.46e-12 | 9 |
adult organism | 2.43e-12 | 114 |
locus ceruleus | 3.36e-10 | 2 |
brainstem nucleus | 3.36e-10 | 2 |
hindbrain nucleus | 3.36e-10 | 2 |
dorsal plus ventral thalamus | 3.52e-10 | 2 |
thalamic complex | 3.52e-10 | 2 |
globus pallidus | 7.97e-10 | 2 |
pallidum | 7.97e-10 | 2 |
small intestine | 1.31e-08 | 4 |
liver | 2.93e-08 | 19 |
digestive gland | 2.93e-08 | 19 |
liver bud | 2.93e-08 | 19 |
neural tube | 2.40e-07 | 56 |
neural rod | 2.40e-07 | 56 |
future spinal cord | 2.40e-07 | 56 |
neural keel | 2.40e-07 | 56 |
brainstem | 2.84e-07 | 6 |
pons | 4.57e-07 | 3 |
hepatic diverticulum | 4.81e-07 | 22 |
liver primordium | 4.81e-07 | 22 |
male genital duct | 7.17e-07 | 3 |
internal male genitalia | 7.17e-07 | 3 |