FFCP PHASE1:Hg19::chr5:30850137..30850150,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:30850137..30850150,- | |||
|coexpression_cluster_id=C260 | |||
|description=CAGE_peak_at_chr5:30850137..30850150,- | |||
|id=chr5:30850137..30850150,- | |||
|ontology_enrichment_celltype=CL:0000359!4.11e-11!32;CL:0002494!3.97e-08!16;CL:0000192!7.76e-08!42;CL:0000514!7.76e-08!42;CL:0002594!1.91e-07!4;CL:0002589!2.10e-07!2;CL:0002549!4.66e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002127;3.28e-23;1!CL:0000911;3.28e-23;1!CL:0000814;3.28e-23;1!CL:0002549;2.59e-12;2!CL:0000322;1.21e-08;3!CL:0002592;1.21e-08;3!CL:0000306;6.87e-07;4!CL:0002222;6.87e-07;4!CL:0002224;6.87e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.40e-23,1;CL:0000914,6.40e-23,1;CL:0000911,6.40e-23,1;CL:0000814,6.40e-23,1;CL:0002042,6.40e-23,1;CL:0002039,6.40e-23,1;CL:0002040,6.40e-23,1;CL:0002041,6.40e-23,1;CL:0002549,2.90e-12,2;CL:0000893,3.62e-12,2;CL:0002489,3.62e-12,2;CL:0000809,3.62e-12,2;CL:0000808,3.62e-12,2;CL:0000894,3.62e-12,2;CL:0000806,3.62e-12,2;CL:0000807,3.62e-12,2;CL:0000805,3.62e-12,2;CL:0002425,3.62e-12,2;CL:0002592,1.04e-08,3;CL:0000322,1.12e-08,3;CL:0000306,6.87e-07,4;CL:0002222,6.87e-07,4;CL:0002224,6.87e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002425;2.59e-12;2 | |||
|ontology_enrichment_disease=DOID:4231!1.39e-07!2;DOID:1907!1.39e-07!2;DOID:14566!4.59e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4231;2.59e-12;2!DOID:3910;2.59e-12;2!DOID:1907;2.59e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,1.85e-12,2;DOID:1907,1.85e-12,2;DOID:3910,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.29e-12!118;UBERON:0001637!1.64e-12!42;UBERON:0003509!1.64e-12!42;UBERON:0004572!1.64e-12!42;UBERON:0004535!2.66e-11!110;UBERON:0001009!7.82e-11!113;UBERON:0002049!6.63e-10!79;UBERON:0007798!6.63e-10!79;UBERON:0004872!4.63e-09!84;UBERON:0001981!1.03e-07!60;UBERON:0007500!1.03e-07!60;UBERON:0004537!1.03e-07!60;UBERON:0006965!1.03e-07!60;UBERON:0001310!1.91e-07!4;UBERON:0001529!2.10e-07!2;UBERON:0007204!2.10e-07!2;UBERON:0004573!2.71e-07!33;UBERON:0004571!2.71e-07!33;UBERON:0003947!4.66e-07!2;UBERON:0005629!4.66e-07!2;UBERON:0005358!4.66e-07!2;UBERON:0001886!4.66e-07!2;UBERON:0004086!4.66e-07!2;UBERON:0005282!4.66e-07!2;UBERON:0005281!4.66e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.28e-23;1!UBERON:0009842;3.28e-23;1!UBERON:0003704;3.28e-23;1!UBERON:0001171;3.28e-23;1!UBERON:0001172;3.28e-23;1!UBERON:0004903;2.59e-12;2!UBERON:0005629;2.59e-12;2!UBERON:0005358;2.59e-12;2!UBERON:0001886;2.59e-12;2!UBERON:0004086;2.59e-12;2!UBERON:0005282;2.59e-12;2!UBERON:0002173;2.59e-12;2!UBERON:0002186;2.59e-12;2!UBERON:0005281;2.59e-12;2!UBERON:0000058;9.23e-10;10!UBERON:0004821;1.21e-08;3!UBERON:0007499;1.21e-08;3!UBERON:0003498;1.21e-08;3!UBERON:0003215;1.21e-08;3!UBERON:0005985;1.21e-08;3!UBERON:0010368;1.21e-08;3!UBERON:0009911;1.21e-08;3!UBERON:0002299;1.21e-08;3!UBERON:0001621;1.21e-08;3!UBERON:0001280;1.21e-08;3!UBERON:0004647;1.21e-08;3!UBERON:0006524;1.21e-08;3!UBERON:0008874;1.21e-08;3!UBERON:0002169;1.21e-08;3!UBERON:0004894;1.21e-08;3!UBERON:0010077;6.87e-07;4!UBERON:0005389;6.87e-07;4!UBERON:0000484;6.87e-07;4!UBERON:0000965;6.87e-07;4!UBERON:0001803;6.87e-07;4!UBERON:0002394;8.61e-07;4!UBERON:0003928;8.61e-07;4!UBERON:0009856;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,5.13e-23,1;UBERON:0009842,5.13e-23,1;UBERON:0003704,5.13e-23,1;UBERON:0001171,5.13e-23,1;UBERON:0001172,5.13e-23,1;UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0005629,2.90e-12,2;UBERON:0005358,2.90e-12,2;UBERON:0001886,2.90e-12,2;UBERON:0004086,2.90e-12,2;UBERON:0005282,2.90e-12,2;UBERON:0005281,2.90e-12,2;UBERON:0001621,1.04e-08,3;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3;UBERON:0001280,1.40e-08,3;UBERON:0004647,1.40e-08,3;UBERON:0005171,1.40e-08,3;UBERON:0010077,6.87e-07,4;UBERON:0005389,6.87e-07,4;UBERON:0000484,6.87e-07,4;UBERON:0002546,6.87e-07,4;UBERON:0000965,6.87e-07,4;UBERON:0001803,6.87e-07,4;UBERON:0003073,6.87e-07,4;UBERON:0005426,6.87e-07,4 | |||
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| ||
|short_description=p@chr5:30850137..30850150,- | |||
}} | }} |
Latest revision as of 14:16, 30 July 2015
Short description: | p@chr5:30850137..30850150, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:30850137..30850150, - |
Coexpression cluster: | C260_acute_chronic_Natural_NK_Basophils_biphenotypic_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.40e-23 | 1 |
immature NK T cell | 6.40e-23 | 1 |
effector T cell | 6.40e-23 | 1 |
mature NK T cell | 6.40e-23 | 1 |
immature NK T cell stage IV | 6.40e-23 | 1 |
immature NK T cell stage I | 6.40e-23 | 1 |
immature NK T cell stage II | 6.40e-23 | 1 |
immature NK T cell stage III | 6.40e-23 | 1 |
fibroblast of choroid plexus | 2.90e-12 | 2 |
thymocyte | 3.62e-12 | 2 |
double negative thymocyte | 3.62e-12 | 2 |
double-positive, alpha-beta thymocyte | 3.62e-12 | 2 |
DN4 thymocyte | 3.62e-12 | 2 |
DN1 thymic pro-T cell | 3.62e-12 | 2 |
DN2 thymocyte | 3.62e-12 | 2 |
DN3 thymocyte | 3.62e-12 | 2 |
immature single positive thymocyte | 3.62e-12 | 2 |
early T lineage precursor | 3.62e-12 | 2 |
smooth muscle cell of the coronary artery | 1.04e-08 | 3 |
pneumocyte | 1.12e-08 | 3 |
crystallin accumulating cell | 6.87e-07 | 4 |
vertebrate lens cell | 6.87e-07 | 4 |
lens epithelial cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 5.13e-23 | 1 |
acinus | 5.13e-23 | 1 |
intrahepatic bile duct | 5.13e-23 | 1 |
portal lobule | 5.13e-23 | 1 |
hepatic acinus | 5.13e-23 | 1 |
bronchoalveolar duct junction | 2.32e-12 | 2 |
alveolar duct | 2.32e-12 | 2 |
bronchiole | 2.32e-12 | 2 |
vascular plexus | 2.90e-12 | 2 |
ventricle of nervous system | 2.90e-12 | 2 |
choroid plexus | 2.90e-12 | 2 |
brain ventricle | 2.90e-12 | 2 |
ventricular system of brain | 2.90e-12 | 2 |
ventricular system of central nervous system | 2.90e-12 | 2 |
coronary artery | 1.04e-08 | 3 |
pulmonary alveolus epithelium | 1.12e-08 | 3 |
alveolus | 1.12e-08 | 3 |
pulmonary lobule | 1.12e-08 | 3 |
lobule | 1.12e-08 | 3 |
alveolus of lung | 1.12e-08 | 3 |
alveolar system | 1.12e-08 | 3 |
pulmonary acinus | 1.12e-08 | 3 |
alveolar sac | 1.12e-08 | 3 |
alveolar wall | 1.12e-08 | 3 |
liver parenchyma | 1.40e-08 | 3 |
liver lobule | 1.40e-08 | 3 |
hepatic duct | 1.40e-08 | 3 |
cuboidal epithelium | 6.87e-07 | 4 |
transparent eye structure | 6.87e-07 | 4 |
simple cuboidal epithelium | 6.87e-07 | 4 |
cranial placode | 6.87e-07 | 4 |
lens of camera-type eye | 6.87e-07 | 4 |
epithelium of lens | 6.87e-07 | 4 |
lens placode | 6.87e-07 | 4 |
lens vesicle | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 1.85e-12 | 2 |
malignant fibroxanthoma | 1.85e-12 | 2 |
lung adenocarcinoma | 2.32e-12 | 2 |