FFCP PHASE1:Hg19::chr5:28614667..28614692,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:28614667..28614692,+ | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_at_chr5:28614667..28614692,+ | |description=CAGE_peak_at_chr5:28614667..28614692,+ | ||
|id=chr5:28614667..28614692,+ | |id=chr5:28614667..28614692,+ | ||
|ontology_enrichment_celltype=CL:0000946!4.41e-08!1;CL:0000786!4.41e-08!1;CL:0000980!4.41e-08!1 | |ontology_enrichment_celltype=CL:0000946!4.41e-08!1;CL:0000786!4.41e-08!1;CL:0000980!4.41e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002149;8.48e-07;6!CL:0002255;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,8.48e-07,6;CL:0002255,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!1.31e-08!1;DOID:3371!1.52e-08!1;DOID:4549!1.52e-08!1;DOID:5861!1.52e-08!1;DOID:6496!1.52e-08!1;DOID:4960!2.69e-08!1;DOID:0070004!2.69e-08!1;DOID:178!3.83e-08!1;DOID:326!3.83e-08!1;DOID:3978!3.83e-08!1;DOID:3394!3.83e-08!1;DOID:5844!3.83e-08!1 | |ontology_enrichment_disease=DOID:6193!1.31e-08!1;DOID:3371!1.52e-08!1;DOID:4549!1.52e-08!1;DOID:5861!1.52e-08!1;DOID:6496!1.52e-08!1;DOID:4960!2.69e-08!1;DOID:0070004!2.69e-08!1;DOID:178!3.83e-08!1;DOID:326!3.83e-08!1;DOID:3978!3.83e-08!1;DOID:3394!3.83e-08!1;DOID:5844!3.83e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:6193;7.06e-34;1!DOID:3350;1.07e-17;2!DOID:3001;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.06e-34,1;DOID:3350,1.07e-17,2;DOID:3001,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001896!5.80e-21!3;UBERON:0005290!5.80e-21!3;UBERON:0010096!5.80e-21!3;UBERON:0003978!2.84e-10!3;UBERON:0009751!2.84e-10!3;UBERON:0000946!2.84e-10!3;UBERON:0002523!2.84e-10!3;UBERON:0005983!2.84e-10!3;UBERON:0002165!2.84e-10!3;UBERON:0002062!2.84e-10!3;UBERON:0007280!2.84e-10!3;UBERON:0002135!1.88e-08!1;UBERON:0002146!3.33e-08!1;UBERON:0005623!3.33e-08!1;UBERON:0002298!3.37e-08!8;UBERON:0000997!5.43e-08!1;UBERON:0005056!5.43e-08!1;UBERON:0001882!6.68e-08!1;UBERON:0005403!6.68e-08!1 | |ontology_enrichment_uberon=UBERON:0001896!5.80e-21!3;UBERON:0005290!5.80e-21!3;UBERON:0010096!5.80e-21!3;UBERON:0003978!2.84e-10!3;UBERON:0009751!2.84e-10!3;UBERON:0000946!2.84e-10!3;UBERON:0002523!2.84e-10!3;UBERON:0005983!2.84e-10!3;UBERON:0002165!2.84e-10!3;UBERON:0002062!2.84e-10!3;UBERON:0007280!2.84e-10!3;UBERON:0002135!1.88e-08!1;UBERON:0002146!3.33e-08!1;UBERON:0005623!3.33e-08!1;UBERON:0002298!3.37e-08!8;UBERON:0000997!5.43e-08!1;UBERON:0005056!5.43e-08!1;UBERON:0001882!6.68e-08!1;UBERON:0005403!6.68e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;2.07e-12;3!UBERON:0001235;2.07e-12;3!UBERON:0006858;2.07e-12;3!UBERON:0000945;5.35e-08;5!UBERON:0010039;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.07e-12,3;UBERON:0001235,2.07e-12,3;UBERON:0006858,2.07e-12,3 | |||
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|short_description=p@chr5:28614667..28614692,+ | |short_description=p@chr5:28614667..28614692,+ | ||
}} | }} |
Latest revision as of 14:15, 30 July 2015
Short description: | p@chr5:28614667..28614692, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:28614667..28614692, + |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 8.48e-07 | 6 |
stromal cell of endometrium | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.07e-12 | 3 |
adrenal cortex | 2.07e-12 | 3 |
adrenal/interrenal gland | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.06e-34 | 1 |
mesenchymal cell neoplasm | 1.07e-17 | 2 |
female reproductive endometrioid cancer | 8.48e-07 | 6 |