FFCP PHASE1:Hg19::chr5:24271923..24271937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:24271923..24271937,- | |||
|coexpression_cluster_id=C170 | |||
|description=CAGE_peak_at_chr5:24271923..24271937,- | |description=CAGE_peak_at_chr5:24271923..24271937,- | ||
|id=chr5:24271923..24271937,- | |id=chr5:24271923..24271937,- | ||
|ontology_enrichment_celltype=CL:0002150!1.70e-17!3;CL:0000861!1.70e-17!3;CL:0002127!9.15e-07!1;CL:0000914!9.15e-07!1;CL:0000911!9.15e-07!1;CL:0000814!9.15e-07!1;CL:0002042!9.15e-07!1;CL:0002039!9.15e-07!1;CL:0002040!9.15e-07!1;CL:0002041!9.15e-07!1 | |ontology_enrichment_celltype=CL:0002150!1.70e-17!3;CL:0000861!1.70e-17!3;CL:0002127!9.15e-07!1;CL:0000914!9.15e-07!1;CL:0000911!9.15e-07!1;CL:0000814!9.15e-07!1;CL:0002042!9.15e-07!1;CL:0002039!9.15e-07!1;CL:0002040!9.15e-07!1;CL:0002041!9.15e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.78e-15;1!CL:0000911;1.78e-15;1!CL:0000814;1.78e-15;1!CL:0000084;2.58e-09;25!CL:0000791;1.37e-07;18!CL:0000789;1.37e-07;18!CL:0002419;1.37e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.06e-15,1;CL:0000914,2.06e-15,1;CL:0000911,2.06e-15,1;CL:0000814,2.06e-15,1;CL:0002042,2.06e-15,1;CL:0002039,2.06e-15,1;CL:0002040,2.06e-15,1;CL:0002041,2.06e-15,1;CL:0000084,2.64e-09,25;CL:0000827,2.64e-09,25;CL:0000893,2.31e-08,2;CL:0002489,2.31e-08,2;CL:0000809,2.31e-08,2;CL:0000808,2.31e-08,2;CL:0000894,2.31e-08,2;CL:0000806,2.31e-08,2;CL:0000807,2.31e-08,2;CL:0000805,2.31e-08,2;CL:0002425,2.31e-08,2;CL:0000791,1.40e-07,18;CL:0000789,1.40e-07,18;CL:0002420,1.40e-07,18;CL:0002419,1.40e-07,18;CL:0000790,1.40e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.38e-12;5!CL:0002425;2.15e-08;2!CL:0000790;1.37e-07;18 | |||
|ontology_enrichment_disease=DOID:0050687!4.94e-14!143;DOID:305!2.34e-13!106;DOID:14566!3.47e-13!239;DOID:162!1.77e-12!235;DOID:3493!2.17e-11!2;DOID:3112!7.35e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.16e-15;1!DOID:3493;1.61e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.16e-15,1;DOID:3493,1.61e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.49e-14!9;UBERON:0002046!4.67e-10!5;UBERON:0004117!4.67e-10!5;UBERON:0007689!4.67e-10!5;UBERON:0007123!4.67e-10!5;UBERON:0003091!4.67e-10!5;UBERON:0001557!2.93e-09!19;UBERON:0009722!7.04e-08!11;UBERON:0007690!7.04e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.38e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.38e-12,5;UBERON:0004117,2.38e-12,5;UBERON:0007689,2.38e-12,5;UBERON:0007123,2.38e-12,5;UBERON:0003091,2.38e-12,5;UBERON:0009722,3.26e-12,11;UBERON:0007690,3.26e-12,11;UBERON:0008814,1.11e-07,18 | |||
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|short_description=p@chr5:24271923..24271937,- | |short_description=p@chr5:24271923..24271937,- | ||
}} | }} |
Latest revision as of 14:11, 30 July 2015
Short description: | p@chr5:24271923..24271937, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:24271923..24271937, - |
Coexpression cluster: | C170_epitheloid_cervical_Hep2_keratoacanthoma_adult_neuroblastoma_signet |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.06e-15 | 1 |
immature NK T cell | 2.06e-15 | 1 |
effector T cell | 2.06e-15 | 1 |
mature NK T cell | 2.06e-15 | 1 |
immature NK T cell stage IV | 2.06e-15 | 1 |
immature NK T cell stage I | 2.06e-15 | 1 |
immature NK T cell stage II | 2.06e-15 | 1 |
immature NK T cell stage III | 2.06e-15 | 1 |
T cell | 2.64e-09 | 25 |
pro-T cell | 2.64e-09 | 25 |
thymocyte | 2.31e-08 | 2 |
double negative thymocyte | 2.31e-08 | 2 |
double-positive, alpha-beta thymocyte | 2.31e-08 | 2 |
DN4 thymocyte | 2.31e-08 | 2 |
DN1 thymic pro-T cell | 2.31e-08 | 2 |
DN2 thymocyte | 2.31e-08 | 2 |
DN3 thymocyte | 2.31e-08 | 2 |
immature single positive thymocyte | 2.31e-08 | 2 |
early T lineage precursor | 2.31e-08 | 2 |
mature alpha-beta T cell | 1.40e-07 | 18 |
alpha-beta T cell | 1.40e-07 | 18 |
immature T cell | 1.40e-07 | 18 |
mature T cell | 1.40e-07 | 18 |
immature alpha-beta T cell | 1.40e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.38e-12 | 5 |
pharyngeal pouch | 2.38e-12 | 5 |
thyroid diverticulum | 2.38e-12 | 5 |
pharyngeal pouch 2 | 2.38e-12 | 5 |
thyroid primordium | 2.38e-12 | 5 |
entire pharyngeal arch endoderm | 3.26e-12 | 11 |
early pharyngeal endoderm | 3.26e-12 | 11 |
pharyngeal arch system | 1.11e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.16e-15 | 1 |
signet ring cell adenocarcinoma | 1.61e-08 | 2 |