FFCP PHASE1:Hg19::chr5:180257974..180258065,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:180257974..180258065,+ to FFCP PHASE1:Hg19::chr5:180257974..180258065,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000502162,ENST00000508309,ENST00000509921_5end | |||
|cluster_id=chr5:180257974..180258065,+ | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_1_at_ENST00000502162_5end,CAGE_peak_1_at_ENST00000508309_5end,CAGE_peak_1_at_ENST00000509921_5end | |||
|id=chr5:180257974..180258065,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.28e-36!140;CL:0002087!1.33e-33!119;CL:0002031!7.37e-33!124;CL:0000766!9.04e-27!76;CL:0002057!8.31e-26!42;CL:0000037!8.78e-26!172;CL:0000566!8.78e-26!172;CL:0000988!1.55e-25!182;CL:0002032!2.13e-25!165;CL:0000837!2.13e-25!165;CL:0000839!8.30e-25!70;CL:0002194!1.84e-24!63;CL:0000576!1.84e-24!63;CL:0000040!1.84e-24!63;CL:0000559!1.84e-24!63;CL:0000557!1.88e-24!71;CL:0002009!8.56e-24!65;CL:0000860!3.44e-21!45;CL:0000763!6.47e-16!112;CL:0000049!6.47e-16!112;CL:0000838!3.18e-09!52;CL:0000542!3.65e-09!53;CL:0000051!3.65e-09!53;CL:0000791!9.29e-08!18;CL:0000789!9.29e-08!18;CL:0002420!9.29e-08!18;CL:0002419!9.29e-08!18;CL:0000790!9.29e-08!18;CL:0000084!4.84e-07!25;CL:0000827!4.84e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.59e-19;33!CL:0002057;3.59e-19;33!CL:0000473;4.06e-19;39!CL:0000234;4.06e-19;39!CL:0000576;1.98e-17;48!CL:0000766;8.27e-14;69!CL:0002087;6.39e-11;104!CL:0000738;1.08e-09;136!CL:0000791;6.71e-08;18!CL:0000789;6.71e-08;18!CL:0002419;6.71e-08;18!CL:0000084;2.44e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.49e-40,136;CL:0002087,3.08e-38,115;CL:0002031,2.58e-37,120;CL:0000766,7.35e-32,72;CL:0000839,6.58e-30,66;CL:0002194,6.95e-30,59;CL:0000576,6.95e-30,59;CL:0000040,6.95e-30,59;CL:0000559,6.95e-30,59;CL:0000473,9.55e-30,48;CL:0000234,9.55e-30,48;CL:0000557,1.85e-29,67;CL:0002009,5.25e-29,61;CL:0000037,8.25e-29,168;CL:0000988,9.74e-29,177;CL:0002032,2.35e-28,161;CL:0000837,2.35e-28,161;CL:0000860,4.95e-26,42;CL:0002057,4.95e-26,42;CL:0000763,1.62e-18,108;CL:0000049,1.62e-18,108;CL:0000838,2.17e-09,52;CL:0000542,2.49e-09,53;CL:0000051,2.49e-09,53;CL:0000791,8.14e-08,18;CL:0000789,8.14e-08,18;CL:0002420,8.14e-08,18;CL:0002419,8.14e-08,18;CL:0000790,8.14e-08,18;CL:0000084,3.29e-07,25;CL:0000827,3.29e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;4.70e-19;42!CL:0000790;6.71e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.21e-28!102;UBERON:0003061!2.21e-28!102;UBERON:0002193!4.07e-27!112;UBERON:0007023!7.75e-26!115;UBERON:0002371!6.50e-23!80;UBERON:0001474!3.67e-19!86;UBERON:0002405!1.17e-15!115;UBERON:0004765!6.96e-15!101;UBERON:0001434!6.96e-15!101;UBERON:0001049!1.91e-11!57;UBERON:0005068!1.91e-11!57;UBERON:0006241!1.91e-11!57;UBERON:0007135!1.91e-11!57;UBERON:0002616!5.35e-09!59;UBERON:0003080!1.23e-08!42;UBERON:0002780!2.16e-08!41;UBERON:0001890!2.16e-08!41;UBERON:0006240!2.16e-08!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.46e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.77e-33,98;UBERON:0003061,8.77e-33,98;UBERON:0002193,3.73e-31,108;UBERON:0002371,2.37e-27,76;UBERON:0002405,2.55e-26,93;UBERON:0007023,7.23e-26,114;UBERON:0001474,4.05e-23,82;UBERON:0004765,4.31e-21,90;UBERON:0001434,5.43e-18,100;UBERON:0001049,2.77e-11,56;UBERON:0005068,2.77e-11,56;UBERON:0006241,2.77e-11,56;UBERON:0007135,2.77e-11,56;UBERON:0000073,2.25e-10,53;UBERON:0002616,2.25e-10,53;UBERON:0002780,1.87e-08,41;UBERON:0001890,1.87e-08,41;UBERON:0003080,1.87e-08,41;UBERON:0006240,1.87e-08,41;UBERON:0003081,3.37e-08,203;UBERON:0003075,5.49e-07,82;UBERON:0007284,5.49e-07,82 | |||
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| ||
|short_description=p1@ENST00000502162,p1@ENST00000508309,p1@ENST00000509921 | |||
}} | }} |
Latest revision as of 14:02, 30 July 2015
Short description: | p1@ENST00000502162, p1@ENST00000508309, p1@ENST00000509921 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000502162_5end, CAGE_peak_1_at_ENST00000508309_5end, CAGE_peak_1_at_ENST00000509921_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 0bp_to_ENST00000502162, ENST00000508309, ENST00000509921_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.77e-33 | 98 |
blood island | 8.77e-33 | 98 |
hemolymphoid system | 3.73e-31 | 108 |
bone marrow | 2.37e-27 | 76 |
immune system | 2.55e-26 | 93 |
adult organism | 7.23e-26 | 114 |
bone element | 4.05e-23 | 82 |
skeletal element | 4.31e-21 | 90 |
skeletal system | 5.43e-18 | 100 |
neural tube | 2.77e-11 | 56 |
neural rod | 2.77e-11 | 56 |
future spinal cord | 2.77e-11 | 56 |
neural keel | 2.77e-11 | 56 |
regional part of nervous system | 2.25e-10 | 53 |
regional part of brain | 2.25e-10 | 53 |
regional part of forebrain | 1.87e-08 | 41 |
forebrain | 1.87e-08 | 41 |
anterior neural tube | 1.87e-08 | 41 |
future forebrain | 1.87e-08 | 41 |
lateral plate mesoderm | 3.37e-08 | 203 |
neural plate | 5.49e-07 | 82 |
presumptive neural plate | 5.49e-07 | 82 |