FFCP PHASE1:Hg19::chr5:171837860..171837871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:171837860..171837871,+ | |||
|coexpression_cluster_id=C432 | |||
|description=CAGE_peak_at_chr5:171837860..171837871,+ | |description=CAGE_peak_at_chr5:171837860..171837871,+ | ||
|id=chr5:171837860..171837871,+ | |id=chr5:171837860..171837871,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.18e-96!42;CL:0000860!6.76e-90!45;CL:0000766!7.99e-64!76;CL:0002194!8.58e-62!63;CL:0000576!8.58e-62!63;CL:0000040!8.58e-62!63;CL:0000559!8.58e-62!63;CL:0002009!8.95e-60!65;CL:0000839!3.17e-55!70;CL:0000557!2.16e-54!71;CL:0000763!7.07e-42!112;CL:0000049!7.07e-42!112;CL:0000738!2.00e-40!140;CL:0002087!6.71e-39!119;CL:0000037!5.57e-32!172;CL:0000566!5.57e-32!172;CL:0002031!8.42e-32!124;CL:0000988!6.05e-30!182;CL:0002032!5.02e-29!165;CL:0000837!5.02e-29!165;CL:0000767!1.46e-19!3;CL:0000134!1.33e-12!358;CL:0002320!2.96e-12!365;CL:0000219!4.99e-11!390;CL:0000048!1.48e-09!430;CL:0000723!2.39e-09!436;CL:0000034!4.46e-09!444;CL:0000842!7.12e-09!3;CL:0000094!1.19e-07!8;CL:0000224!7.29e-07!4;CL:0002393!9.45e-07!9;CL:0002397!9.45e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.18e-96!42;CL:0000860!6.76e-90!45;CL:0000766!7.99e-64!76;CL:0002194!8.58e-62!63;CL:0000576!8.58e-62!63;CL:0000040!8.58e-62!63;CL:0000559!8.58e-62!63;CL:0002009!8.95e-60!65;CL:0000839!3.17e-55!70;CL:0000557!2.16e-54!71;CL:0000763!7.07e-42!112;CL:0000049!7.07e-42!112;CL:0000738!2.00e-40!140;CL:0002087!6.71e-39!119;CL:0000037!5.57e-32!172;CL:0000566!5.57e-32!172;CL:0002031!8.42e-32!124;CL:0000988!6.05e-30!182;CL:0002032!5.02e-29!165;CL:0000837!5.02e-29!165;CL:0000767!1.46e-19!3;CL:0000134!1.33e-12!358;CL:0002320!2.96e-12!365;CL:0000219!4.99e-11!390;CL:0000048!1.48e-09!430;CL:0000723!2.39e-09!436;CL:0000034!4.46e-09!444;CL:0000842!7.12e-09!3;CL:0000094!1.19e-07!8;CL:0000224!7.29e-07!4;CL:0002393!9.45e-07!9;CL:0002397!9.45e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.38e-51;33!CL:0002057;4.38e-51;33!CL:0000473;6.03e-35;39!CL:0000234;6.03e-35;39!CL:0000576;1.72e-24;48!CL:0000766;6.14e-18;69!CL:0000763;1.89e-10;100!CL:0002087;1.69e-09;104!CL:0000738;9.26e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.28e-51,42;CL:0002057,4.28e-51,42;CL:0000473,1.31e-44,48;CL:0000234,1.31e-44,48;CL:0002194,1.60e-35,59;CL:0000576,1.60e-35,59;CL:0000040,1.60e-35,59;CL:0000559,1.60e-35,59;CL:0002009,2.38e-34,61;CL:0000766,3.43e-34,72;CL:0000839,1.01e-31,66;CL:0000557,3.06e-31,67;CL:0000763,1.37e-22,108;CL:0000049,1.37e-22,108;CL:0002087,6.46e-18,115;CL:0000738,9.17e-18,136;CL:0002031,3.92e-17,120;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.46e-32;42!CL:0000049;2.85e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.25e-48!80;UBERON:0001474!3.54e-44!86;UBERON:0002390!8.58e-43!102;UBERON:0003061!8.58e-43!102;UBERON:0002193!1.47e-38!112;UBERON:0004765!5.83e-37!101;UBERON:0001434!5.83e-37!101;UBERON:0002405!6.61e-32!115;UBERON:0002204!1.73e-20!167;UBERON:0003081!1.33e-17!216;UBERON:0002384!8.84e-12!375 | |ontology_enrichment_uberon=UBERON:0002371!8.25e-48!80;UBERON:0001474!3.54e-44!86;UBERON:0002390!8.58e-43!102;UBERON:0003061!8.58e-43!102;UBERON:0002193!1.47e-38!112;UBERON:0004765!5.83e-37!101;UBERON:0001434!5.83e-37!101;UBERON:0002405!6.61e-32!115;UBERON:0002204!1.73e-20!167;UBERON:0003081!1.33e-17!216;UBERON:0002384!8.84e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.75e-27,76;UBERON:0001474,1.98e-25,82;UBERON:0004765,4.12e-23,90;UBERON:0002405,2.42e-22,93;UBERON:0002390,3.64e-21,98;UBERON:0003061,3.64e-21,98;UBERON:0001434,9.99e-21,100;UBERON:0002193,3.93e-19,108;UBERON:0002204,4.91e-12,167;UBERON:0003081,1.05e-09,203 | |||
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|short_description=p@chr5:171837860..171837871,+ | |short_description=p@chr5:171837860..171837871,+ | ||
}} | }} |
Latest revision as of 13:04, 30 July 2015
Short description: | p@chr5:171837860..171837871, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:171837860..171837871, + |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.28e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.28e-51 | 42 |
defensive cell | 1.31e-44 | 48 |
phagocyte | 1.31e-44 | 48 |
monopoietic cell | 1.60e-35 | 59 |
monocyte | 1.60e-35 | 59 |
monoblast | 1.60e-35 | 59 |
promonocyte | 1.60e-35 | 59 |
macrophage dendritic cell progenitor | 2.38e-34 | 61 |
myeloid leukocyte | 3.43e-34 | 72 |
myeloid lineage restricted progenitor cell | 1.01e-31 | 66 |
granulocyte monocyte progenitor cell | 3.06e-31 | 67 |
myeloid cell | 1.37e-22 | 108 |
common myeloid progenitor | 1.37e-22 | 108 |
nongranular leukocyte | 6.46e-18 | 115 |
leukocyte | 9.17e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 3.92e-17 | 120 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.75e-27 | 76 |
bone element | 1.98e-25 | 82 |
skeletal element | 4.12e-23 | 90 |
immune system | 2.42e-22 | 93 |
hematopoietic system | 3.64e-21 | 98 |
blood island | 3.64e-21 | 98 |
skeletal system | 9.99e-21 | 100 |
hemolymphoid system | 3.93e-19 | 108 |
musculoskeletal system | 4.91e-12 | 167 |
lateral plate mesoderm | 1.05e-09 | 203 |