FFCP PHASE1:Hg19::chr5:150406539..150406588,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:150406539..150406588,- | |||
|coexpression_cluster_id=C331 | |||
|description=CAGE_peak_at_chr5:150406539..150406588,- | |description=CAGE_peak_at_chr5:150406539..150406588,- | ||
|id=chr5:150406539..150406588,- | |id=chr5:150406539..150406588,- | ||
|ontology_enrichment_celltype=CL:0000136!5.18e-11!15 | |ontology_enrichment_celltype=CL:0000136!5.18e-11!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.54e-21;13!CL:0002615;7.71e-12;3!CL:0002521;2.42e-11;3!CL:0002617;3.87e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.53e-18,15;CL:0002615,7.34e-12,3;CL:0002521,2.44e-11,3;CL:0002617,3.37e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.92e-08;4!UBERON:0007284;4.92e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;2.48e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.63e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-23!115;UBERON:0000468!2.92e-07!659 | |ontology_enrichment_uberon=UBERON:0007023!1.19e-23!115;UBERON:0000468!2.92e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.42e-11;3!UBERON:0004151;5.27e-11;3!UBERON:0003978;1.43e-10;3!UBERON:0000946;1.43e-10;3!UBERON:0002081;1.07e-07;2!UBERON:0007100;1.29e-07;25!UBERON:0002133;2.07e-07;2!UBERON:0002072;5.92e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.47e-16,114;UBERON:0002190,2.44e-11,3;UBERON:0004151,4.70e-11,3;UBERON:0003978,1.14e-10,3;UBERON:0009751,1.14e-10,3;UBERON:0000946,1.14e-10,3;UBERON:0002523,1.14e-10,3;UBERON:0005983,1.14e-10,3;UBERON:0002165,1.14e-10,3;UBERON:0002062,1.14e-10,3;UBERON:0007280,1.14e-10,3;UBERON:0002081,9.55e-08,2;UBERON:0010227,9.55e-08,2;UBERON:0002133,1.43e-07,2;UBERON:0007100,5.78e-07,27;UBERON:0002072,5.94e-07,5;UBERON:0003103,8.44e-07,68 | |||
|phase1_expression=4.72363786103447,2.78330681058278,2.67813367782345,9.00659685178174,11.6209884551095,6.97870819280295,2.53299878168311,3.15859936713415,3.91778442299758,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,9.8889202000773,0,0.370784442784429,0.649094787309367,0.348259474598534,1.19662164466979,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,5.90789906681404,0,0.122988438543114,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,1.27587750330633,0,0,0,0.736148950314839,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.464841513839837,0.241718899183244,0,0.460404944679482,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,1.854738209659,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0.768760269460425,0,0.2023155617111,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.577332676353072,5.3624182042863,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,3.80921266106924,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.9924798825107,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,1.28236427328014,0,0,0,0,0,0,0,7.24999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.658156191461918,0,0,0.615602068030377,0,0,0.0897576444097721,0,1.27600463892768,0,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,1.14994833854341,1.22206028986725,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,1.13843818411917,0,0,0,0,1.22308667769421,0,0,0,0,1.35784623083787,0,7.00540296419651,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0.235694034616795,0,0,0.305994652908965,0,0.600420288709789,0.136905378891993,0,0,0,1.39641200636127,2.06244381610515,1.43574604915363,3.39454300848285,6.43839072204856,2.67805748930247,0.335917362433631,0,0,0.472699093843342,0.988990300573997,0.539228350833479,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.121499113316049,0,12.5301074605725,4.09145787452985,0,0,0,2.1440859791201,4.63464379255802,0,0,0,0,0,0,0,0,0.58620893471233,0,0.129282956361551,0.39669780522807,0,0,1.9221734262185,0.157204305099666,2.89967338743037,2.48083010905975,0,0,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,1.22021956690538,0.18628920882415,0.691743174681154,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,1.82089681270989,0.455324382702595,0.79832133146375,0,0,0.0679697329768317,0.263091094251396,0,0,1.25588948560822,0.942693539496011,0.280272163313789,0,0,0,5.00335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11855431797792,0,0,0,0.923965261706223,0,0,0,0,0,0,0.109940516745429,0,0.540219106755613,0.655678681511872,0,1.22574160876953,0,0,0.297046400327086,0,0,0.563903507879121,0.45120521581504,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0.462175628631418,0.432626562123789,0,0,0.126698501011437,0,0,0,0,1.13668047327359,0,0,0,0.639701945702943,1.42838658878244,0,0.124149428591716,0.33639558774184,10.1835453245064,7.88257036937055,0.435433495793923,0.342233301085281,0.5388164241167,1.72133292942423,0.332660356546013,0,0,0,0,2.34640942403454,0,0,6.65756774185513,0.201273793591026,0 | |phase1_expression=4.72363786103447,2.78330681058278,2.67813367782345,9.00659685178174,11.6209884551095,6.97870819280295,2.53299878168311,3.15859936713415,3.91778442299758,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,9.8889202000773,0,0.370784442784429,0.649094787309367,0.348259474598534,1.19662164466979,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,5.90789906681404,0,0.122988438543114,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,1.27587750330633,0,0,0,0.736148950314839,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.464841513839837,0.241718899183244,0,0.460404944679482,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,1.854738209659,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.495854746082934,0.768760269460425,0,0.2023155617111,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.577332676353072,5.3624182042863,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,3.80921266106924,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.9924798825107,0,0.503865495708552,0,0,0,0.0898683511473268,0,0,1.28236427328014,0,0,0,0,0,0,0,7.24999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.658156191461918,0,0,0.615602068030377,0,0,0.0897576444097721,0,1.27600463892768,0,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,1.14994833854341,1.22206028986725,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,1.13843818411917,0,0,0,0,1.22308667769421,0,0,0,0,1.35784623083787,0,7.00540296419651,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0.235694034616795,0,0,0.305994652908965,0,0.600420288709789,0.136905378891993,0,0,0,1.39641200636127,2.06244381610515,1.43574604915363,3.39454300848285,6.43839072204856,2.67805748930247,0.335917362433631,0,0,0.472699093843342,0.988990300573997,0.539228350833479,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.121499113316049,0,12.5301074605725,4.09145787452985,0,0,0,2.1440859791201,4.63464379255802,0,0,0,0,0,0,0,0,0.58620893471233,0,0.129282956361551,0.39669780522807,0,0,1.9221734262185,0.157204305099666,2.89967338743037,2.48083010905975,0,0,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,1.22021956690538,0.18628920882415,0.691743174681154,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,1.82089681270989,0.455324382702595,0.79832133146375,0,0,0.0679697329768317,0.263091094251396,0,0,1.25588948560822,0.942693539496011,0.280272163313789,0,0,0,5.00335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11855431797792,0,0,0,0.923965261706223,0,0,0,0,0,0,0.109940516745429,0,0.540219106755613,0.655678681511872,0,1.22574160876953,0,0,0.297046400327086,0,0,0.563903507879121,0.45120521581504,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0.462175628631418,0.432626562123789,0,0,0.126698501011437,0,0,0,0,1.13668047327359,0,0,0,0.639701945702943,1.42838658878244,0,0.124149428591716,0.33639558774184,10.1835453245064,7.88257036937055,0.435433495793923,0.342233301085281,0.5388164241167,1.72133292942423,0.332660356546013,0,0,0,0,2.34640942403454,0,0,6.65756774185513,0.201273793591026,0 | ||
|short_description=p@chr5:150406539..150406588,- | |short_description=p@chr5:150406539..150406588,- | ||
}} | }} |
Latest revision as of 11:46, 30 July 2015
Short description: | p@chr5:150406539..150406588, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150406539..150406588, - |
Coexpression cluster: | C331_kidney_thyroid_breast_Adipocyte_adipose_retina_vagina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.53e-18 | 15 |
adipocyte of omentum tissue | 7.34e-12 | 3 |
subcutaneous fat cell | 2.44e-11 | 3 |
adipocyte of breast | 3.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.47e-16 | 114 |
subcutaneous adipose tissue | 2.44e-11 | 3 |
cardiac chamber | 4.70e-11 | 3 |
valve | 1.14e-10 | 3 |
cardiac mesenchyme | 1.14e-10 | 3 |
cardial valve | 1.14e-10 | 3 |
tunica intima | 1.14e-10 | 3 |
heart layer | 1.14e-10 | 3 |
endocardium | 1.14e-10 | 3 |
endocardial cushion | 1.14e-10 | 3 |
presumptive endocardium | 1.14e-10 | 3 |
cardiac atrium | 9.55e-08 | 2 |
future cardiac atrium | 9.55e-08 | 2 |
atrioventricular valve | 1.43e-07 | 2 |
primary circulatory organ | 5.78e-07 | 27 |
hypodermis | 5.94e-07 | 5 |
compound organ | 8.44e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.63e-08 | 2 |