FFCP PHASE1:Hg19::chr5:150159532..150159563,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:150159532..150159563,- | |||
|description=CAGE_peak_at_chr5:150159532..150159563,- | |||
|id=chr5:150159532..150159563,- | |||
|ontology_enrichment_celltype=CL:0000048!2.00e-14!430;CL:0000723!5.17e-14!436;CL:0000034!1.77e-13!444;CL:0000136!7.87e-12!15;CL:0000680!3.52e-10!57;CL:0000056!3.52e-10!57;CL:0000355!3.52e-10!57;CL:0000055!4.46e-09!180;CL:0000187!1.63e-08!54;CL:0002320!8.06e-08!365;CL:0000134!8.50e-08!358;CL:0002371!4.48e-07!591;CL:0000183!4.66e-07!59;CL:0000393!8.42e-07!60;CL:0000211!8.42e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002521;1.26e-11;3!CL:0002582;2.50e-11;3!CL:0000136;5.34e-09;13!CL:0000359;1.24e-08;32!CL:0002583;4.36e-08;2!CL:0002561;7.10e-08;2!CL:0002334;3.63e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,2.05e-11,3;CL:0002582,4.09e-11,3;CL:0000359,6.94e-09,32;CL:0000680,2.65e-08,58;CL:0000056,2.65e-08,58;CL:0000355,2.65e-08,58;CL:0000048,4.35e-08,427;CL:0002583,5.13e-08,2;CL:0002561,5.70e-08,2;CL:0000723,7.96e-08,433;CL:0000136,1.04e-07,15;CL:0000034,1.73e-07,441;CL:0002334,4.67e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.92e-13!83;UBERON:0002329!2.92e-13!83;UBERON:0003077!2.92e-13!83;UBERON:0003059!2.92e-13!83;UBERON:0007282!2.92e-13!83;UBERON:0009618!2.92e-13!83;UBERON:0007285!2.92e-13!83;UBERON:0004290!1.91e-12!70;UBERON:0000486!1.86e-11!82;UBERON:0001134!1.50e-09!61;UBERON:0002036!1.50e-09!61;UBERON:0003082!1.50e-09!61;UBERON:0002204!3.87e-09!167;UBERON:0002385!6.37e-09!63;UBERON:0001015!6.37e-09!63;UBERON:0000383!6.37e-09!63;UBERON:0002384!1.21e-08!375;UBERON:0001013!5.77e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;5.35e-18;5!UBERON:0002190;1.26e-11;3!UBERON:0001013;9.30e-09;14!UBERON:0005933;7.10e-08;2!UBERON:0005942;7.10e-08;2!UBERON:0005932;7.10e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,1.01e-17,5;UBERON:0002190,2.05e-11,3;UBERON:0001013,9.69e-09,14;UBERON:0002329,1.89e-08,71;UBERON:0003059,1.89e-08,71;UBERON:0007282,1.89e-08,71;UBERON:0004290,1.89e-08,71;UBERON:0009618,1.89e-08,71;UBERON:0003077,2.78e-08,72;UBERON:0007285,2.78e-08,72;UBERON:0007524,4.03e-08,73;UBERON:0005933,5.70e-08,2;UBERON:0005942,5.70e-08,2;UBERON:0005932,5.70e-08,2;UBERON:0001134,1.42e-07,62;UBERON:0002036,1.42e-07,62;UBERON:0003082,1.42e-07,62;UBERON:0007503,2.24e-07,78;UBERON:0002385,3.03e-07,64;UBERON:0001015,3.03e-07,64;UBERON:0000383,3.03e-07,64;UBERON:0002199,6.02e-07,46;UBERON:0002416,6.02e-07,46 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.845726424575827,0,0.446961094427288,0.872338524100369,5.06599756336621,6.31719873426831,1.04474251279935,0.491467873003018,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,1.2808035326455,0.945928919554341,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.797854630486527,0,0.290209238628584,0,0,0,2.08593167368081,0.65156653411535,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,1.24864030732128,0.570471821544449,2.09228152772521,0.587172493218824,0.323745888736263,0.280901613404497,1.02077085627447,0,1.23990937410919,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0.427114777637135,0.635795703478686,0,2.16410311400722,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0.460249493211497,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.0895585227028483,0,0,1.47798971368783,1.40877494421162,0,1.15295962733569,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0.531876233169741,0,0,0,0,0.714889968290738,0.542621605391443,0,1.62868092146868,0,0,0,0.871533458600294,0,0,0,0,0,0,0,1.30303176000821,0.410952645100767,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0.184369168541703,1.04260337361699,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0.561320188866147,0,0,0.160853921143607,0,1.23367755042124,5.68197521002007,4.18848495670427,1.03850885836724,2.5566283261191,0,0.200506470303285,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,1.06337790121334,0.616194468458578,0.460511024178389,0.964856007391714,1.39646318328756,0.580066775656914,0.596586391912706,0.979352392114111,0,0,0,0,2.78907329578371,2.20368642781448,1.3940745403212,0,0.532306030317022,2.60979897622522,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,2.54562598340749,0,0,0.274537029736055,0.235624804691373,0.606547444719948,1.58510321173008,0,0,1.46228093778771,0,0.409499734223957,0.848432591722276,4.52032466480971,1.65409603063837,0,0,0,0,0.202910376962704,0,0,1.00387946542836,0,0,0.354761064070598,0.633322905892992,0.658589785919804,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,1.1490322207942,0,0.324621940274555,1.40398589056729,0,0.47003968731907,0,0,1.1241165257259,0.201799707191048,0.851692475380653,0,0,0.447352215784832,0.500547425135725,0.390776190804081,0,0,0,0,0,0,0.586032717087576,0,0,1.42068073403207,0,0,0,0,0.140669416410513,0.779160935160341,0.824019371133798,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0,2.55786185113436,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,3.0957485844891,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.866851769704557,0,0,0,0,0,0,0,0.717873024576814,0.599037001496973,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,1.95952416065645,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.7520696820681,1.83807346058077,0.983617892129413,0,1.77213635993397,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,4.47764408660622,0.467426619694449,5.54805861502613,0.568209015825267,0.251567901752575,0.889811221596536,0,0.302461847526478,2.17612080815893,0.443565449968902,0.159296767163702,0,0.776314784381297,4.14706207840855,1.32920857278997,0.521745061811734,0.450772826991655,0.761610424337591,2.84809513243263,0.181848659202559,0.107410557042488,0,0,0.800055529326307,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,2.94569520402945,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8374728641192,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464965701472501,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,1.65664801022791,2.2155485237381,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0.187967835959707,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0.12729431655633,0,0,0,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr5:150159532..150159563,- | |||
}} |
Latest revision as of 11:44, 30 July 2015
Short description: | p@chr5:150159532..150159563, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150159532..150159563, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 2.05e-11 | 3 |
visceral preadipocyte | 4.09e-11 | 3 |
vascular associated smooth muscle cell | 6.94e-09 | 32 |
muscle precursor cell | 2.65e-08 | 58 |
myoblast | 2.65e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.65e-08 | 58 |
multi fate stem cell | 4.35e-08 | 427 |
subcutaneous preadipocyte | 5.13e-08 | 2 |
outer root sheath cell | 5.70e-08 | 2 |
somatic stem cell | 7.96e-08 | 433 |
fat cell | 1.04e-07 | 15 |
stem cell | 1.73e-07 | 441 |
preadipocyte | 4.67e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 1.01e-17 | 5 |
subcutaneous adipose tissue | 2.05e-11 | 3 |
adipose tissue | 9.69e-09 | 14 |
somite | 1.89e-08 | 71 |
presomitic mesoderm | 1.89e-08 | 71 |
presumptive segmental plate | 1.89e-08 | 71 |
dermomyotome | 1.89e-08 | 71 |
trunk paraxial mesoderm | 1.89e-08 | 71 |
paraxial mesoderm | 2.78e-08 | 72 |
presumptive paraxial mesoderm | 2.78e-08 | 72 |
dense mesenchyme tissue | 4.03e-08 | 73 |
hair root sheath | 5.70e-08 | 2 |
hair outer root sheath | 5.70e-08 | 2 |
bulb of hair follicle | 5.70e-08 | 2 |
skeletal muscle tissue | 1.42e-07 | 62 |
striated muscle tissue | 1.42e-07 | 62 |
myotome | 1.42e-07 | 62 |
epithelial vesicle | 2.24e-07 | 78 |
muscle tissue | 3.03e-07 | 64 |
musculature | 3.03e-07 | 64 |
musculature of body | 3.03e-07 | 64 |
integument | 6.02e-07 | 46 |
integumental system | 6.02e-07 | 46 |