FFCP PHASE1:Hg19::chr5:148803658..148803668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:148803658..148803668,+ | |||
|coexpression_cluster_id=C389 | |||
|description=CAGE_peak_at_chr5:148803658..148803668,+ | |description=CAGE_peak_at_chr5:148803658..148803668,+ | ||
|id=chr5:148803658..148803668,+ | |id=chr5:148803658..148803668,+ | ||
|ontology_enrichment_celltype=CL:0000650!6.19e-07!3;CL:1000618!6.19e-07!3;CL:1001318!6.19e-07!3;CL:0002173!6.19e-07!3;CL:1000500!6.19e-07!3 | |ontology_enrichment_celltype=CL:0000650!6.19e-07!3;CL:1000618!6.19e-07!3;CL:1001318!6.19e-07!3;CL:0002173!6.19e-07!3;CL:1000500!6.19e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.21e-40;1!UBERON:0005062;1.64e-40;4!UBERON:0007284;1.64e-40;4!UBERON:0004872;5.54e-07;7 | |||
|ontology_enrichment_disease=DOID:114!1.27e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.16e-78;2!DOID:178;2.70e-40;1!DOID:326;2.70e-40;1!DOID:3978;2.70e-40;1!DOID:3394;2.70e-40;1!DOID:5844;2.70e-40;1!DOID:1287;4.94e-40;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.16e-78,2;DOID:178,2.21e-40,1;DOID:326,2.21e-40,1;DOID:3978,2.21e-40,1;DOID:3394,2.21e-40,1;DOID:5844,2.21e-40,1;DOID:1287,4.94e-40,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-08!115;UBERON:0003103!2.41e-08!69;UBERON:0007100!1.11e-07!27;UBERON:0003978!2.09e-07!3;UBERON:0009751!2.09e-07!3;UBERON:0000946!2.09e-07!3;UBERON:0002523!2.09e-07!3;UBERON:0005983!2.09e-07!3;UBERON:0002165!2.09e-07!3;UBERON:0002062!2.09e-07!3;UBERON:0007280!2.09e-07!3;UBERON:0006947!3.51e-07!3;UBERON:0004054!3.51e-07!3;UBERON:0003567!6.19e-07!3;UBERON:0003838!6.19e-07!3;UBERON:0005169!6.19e-07!3;UBERON:0002321!6.19e-07!3;UBERON:0005215!6.19e-07!3;UBERON:0002303!6.19e-07!3;UBERON:0002319!6.19e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.96e-08!115;UBERON:0003103!2.41e-08!69;UBERON:0007100!1.11e-07!27;UBERON:0003978!2.09e-07!3;UBERON:0009751!2.09e-07!3;UBERON:0000946!2.09e-07!3;UBERON:0002523!2.09e-07!3;UBERON:0005983!2.09e-07!3;UBERON:0002165!2.09e-07!3;UBERON:0002062!2.09e-07!3;UBERON:0007280!2.09e-07!3;UBERON:0006947!3.51e-07!3;UBERON:0004054!3.51e-07!3;UBERON:0003567!6.19e-07!3;UBERON:0003838!6.19e-07!3;UBERON:0005169!6.19e-07!3;UBERON:0002321!6.19e-07!3;UBERON:0005215!6.19e-07!3;UBERON:0002303!6.19e-07!3;UBERON:0002319!6.19e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.47e-53;3!UBERON:0000946;1.47e-53;3!UBERON:0002135;6.62e-41;1!UBERON:0002146;1.21e-40;1!UBERON:0005623;1.21e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0002133;3.11e-21;2!UBERON:0000948;4.60e-17;22!UBERON:0010313;6.14e-17;10!UBERON:0003103;4.90e-11;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.68e-53,3;UBERON:0009751,1.68e-53,3;UBERON:0000946,1.68e-53,3;UBERON:0002523,1.68e-53,3;UBERON:0005983,1.68e-53,3;UBERON:0002165,1.68e-53,3;UBERON:0002062,1.68e-53,3;UBERON:0007280,1.68e-53,3;UBERON:0002135,6.62e-41,1;UBERON:0002146,1.48e-40,1;UBERON:0005623,1.48e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0004797,1.14e-23,7;UBERON:0002133,3.11e-21,2;UBERON:0010313,6.39e-17,10;UBERON:0002342,6.39e-17,10;UBERON:0005062,6.39e-17,10;UBERON:0000948,1.02e-15,24;UBERON:0005498,1.02e-15,24;UBERON:0004140,1.02e-15,24;UBERON:0009881,1.02e-15,24;UBERON:0004141,1.02e-15,24;UBERON:0003084,1.02e-15,24;UBERON:0007005,1.02e-15,24;UBERON:0004139,1.02e-15,24;UBERON:0004291,1.02e-15,24;UBERON:0003103,3.48e-15,68;UBERON:0001009,1.80e-09,112 | |||
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| ||
|short_description=p@chr5:148803658..148803668,+ | |short_description=p@chr5:148803658..148803668,+ | ||
}} | }} |
Latest revision as of 11:24, 30 July 2015
Short description: | p@chr5:148803658..148803668, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:148803658..148803668, + |
Coexpression cluster: | C389_heart_left_umbilical_skin_skeletal_trachea_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.68e-53 | 3 |
cardiac mesenchyme | 1.68e-53 | 3 |
cardial valve | 1.68e-53 | 3 |
tunica intima | 1.68e-53 | 3 |
heart layer | 1.68e-53 | 3 |
endocardium | 1.68e-53 | 3 |
endocardial cushion | 1.68e-53 | 3 |
presumptive endocardium | 1.68e-53 | 3 |
mitral valve | 6.62e-41 | 1 |
pulmonary valve | 1.48e-40 | 1 |
semi-lunar valve | 1.48e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
blood vessel layer | 1.14e-23 | 7 |
atrioventricular valve | 3.11e-21 | 2 |
neural crest-derived structure | 6.39e-17 | 10 |
neural crest | 6.39e-17 | 10 |
neural fold | 6.39e-17 | 10 |
heart | 1.02e-15 | 24 |
primitive heart tube | 1.02e-15 | 24 |
primary heart field | 1.02e-15 | 24 |
anterior lateral plate mesoderm | 1.02e-15 | 24 |
heart tube | 1.02e-15 | 24 |
heart primordium | 1.02e-15 | 24 |
cardiac mesoderm | 1.02e-15 | 24 |
cardiogenic plate | 1.02e-15 | 24 |
heart rudiment | 1.02e-15 | 24 |
compound organ | 3.48e-15 | 68 |
circulatory system | 1.80e-09 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.16e-78 | 2 |
vascular disease | 2.21e-40 | 1 |
ischemia | 2.21e-40 | 1 |
extrinsic cardiomyopathy | 2.21e-40 | 1 |
myocardial ischemia | 2.21e-40 | 1 |
myocardial infarction | 2.21e-40 | 1 |
cardiovascular system disease | 4.94e-40 | 4 |