FFCP PHASE1:Hg19::chr5:142193841..142193874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:142193841..142193874,+ | |||
|coexpression_cluster_id=C623 | |coexpression_cluster_id=C623 | ||
|description=CAGE_peak_at_chr5:142193841..142193874,+ | |description=CAGE_peak_at_chr5:142193841..142193874,+ | ||
|id=chr5:142193841..142193874,+ | |id=chr5:142193841..142193874,+ | ||
|ontology_enrichment_celltype=CL:0000766!5.07e-38!76;CL:0002194!6.27e-31!63;CL:0000576!6.27e-31!63;CL:0000040!6.27e-31!63;CL:0000559!6.27e-31!63;CL:0002009!1.12e-29!65;CL:0000839!7.40e-27!70;CL:0000557!2.43e-26!71;CL:0000763!5.47e-22!112;CL:0000049!5.47e-22!112;CL:0002057!9.25e-19!42;CL:0000738!2.87e-18!140;CL:0000860!4.29e-17!45;CL:0002087!1.04e-14!119;CL:0000094!8.62e-14!8;CL:0002032!6.44e-13!165;CL:0000837!6.44e-13!165;CL:0002031!7.76e-13!124;CL:0000037!1.12e-12!172;CL:0000566!1.12e-12!172;CL:0000988!2.33e-11!182;CL:0000081!1.15e-09!11;CL:0002619!2.41e-08!3;CL:0000775!2.71e-08!3 | |ontology_enrichment_celltype=CL:0000766!5.07e-38!76;CL:0002194!6.27e-31!63;CL:0000576!6.27e-31!63;CL:0000040!6.27e-31!63;CL:0000559!6.27e-31!63;CL:0002009!1.12e-29!65;CL:0000839!7.40e-27!70;CL:0000557!2.43e-26!71;CL:0000763!5.47e-22!112;CL:0000049!5.47e-22!112;CL:0002057!9.25e-19!42;CL:0000738!2.87e-18!140;CL:0000860!4.29e-17!45;CL:0002087!1.04e-14!119;CL:0000094!8.62e-14!8;CL:0002032!6.44e-13!165;CL:0000837!6.44e-13!165;CL:0002031!7.76e-13!124;CL:0000037!1.12e-12!172;CL:0000566!1.12e-12!172;CL:0000988!2.33e-11!182;CL:0000081!1.15e-09!11;CL:0002619!2.41e-08!3;CL:0000775!2.71e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.90e-26;8!CL:0002619;2.16e-26;3!CL:0000775;3.04e-26;3!CL:0000235;6.20e-22;6!CL:0000081;3.22e-19;11!CL:0000771;6.82e-18;2!CL:0000840;1.45e-13;5!CL:0000990;3.27e-09;8!CL:0000451;1.28e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.17e-26,72;CL:0000094,1.85e-26,8;CL:0002619,2.07e-26,3;CL:0000775,3.17e-26,3;CL:0000235,5.26e-22,6;CL:0000081,3.16e-19,11;CL:0000771,6.27e-18,2;CL:0000763,6.23e-17,108;CL:0000049,6.23e-17,108;CL:0002194,4.50e-15,59;CL:0000576,4.50e-15,59;CL:0000040,4.50e-15,59;CL:0000559,4.50e-15,59;CL:0002009,1.58e-14,61;CL:0000840,1.45e-13,5;CL:0001029,1.45e-13,5;CL:0000839,2.61e-13,66;CL:0000557,4.35e-13,67;CL:0000738,6.82e-13,136;CL:0002032,1.84e-10,161;CL:0000837,1.84e-10,161;CL:0000037,6.54e-10,168;CL:0000988,2.89e-09,177;CL:0000990,3.27e-09,8;CL:0000451,1.28e-07,10;CL:0002087,6.30e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.65e-33!102;UBERON:0003061!2.65e-33!102;UBERON:0002193!9.00e-31!112;UBERON:0002371!2.77e-22!80;UBERON:0007023!8.32e-22!115;UBERON:0001474!4.66e-20!86;UBERON:0002405!5.65e-18!115;UBERON:0004765!1.13e-15!101;UBERON:0001434!1.13e-15!101;UBERON:0003081!1.75e-13!216;UBERON:0000178!4.08e-11!15;UBERON:0000179!4.08e-11!15;UBERON:0000463!4.08e-11!15;UBERON:0001896!7.33e-07!3;UBERON:0005290!7.33e-07!3;UBERON:0010096!7.33e-07!3 | |ontology_enrichment_uberon=UBERON:0002390!2.65e-33!102;UBERON:0003061!2.65e-33!102;UBERON:0002193!9.00e-31!112;UBERON:0002371!2.77e-22!80;UBERON:0007023!8.32e-22!115;UBERON:0001474!4.66e-20!86;UBERON:0002405!5.65e-18!115;UBERON:0004765!1.13e-15!101;UBERON:0001434!1.13e-15!101;UBERON:0003081!1.75e-13!216;UBERON:0000178!4.08e-11!15;UBERON:0000179!4.08e-11!15;UBERON:0000463!4.08e-11!15;UBERON:0001896!7.33e-07!3;UBERON:0005290!7.33e-07!3;UBERON:0010096!7.33e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.11e-34;15!UBERON:0000179;7.11e-34;15!UBERON:0000463;7.11e-34;15!UBERON:0002390;1.45e-14;32!UBERON:0002193;1.91e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.28e-34,15;UBERON:0000179,7.28e-34,15;UBERON:0000463,7.28e-34,15;UBERON:0002390,5.06e-27,98;UBERON:0003061,5.06e-27,98;UBERON:0002193,2.97e-24,108;UBERON:0003081,1.91e-11,203;UBERON:0002371,2.40e-11,76;UBERON:0001474,2.14e-10,82;UBERON:0004765,2.53e-09,90;UBERON:0002405,5.73e-09,93;UBERON:0001434,3.20e-08,100 | |||
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| ||
|short_description=p@chr5:142193841..142193874,+ | |short_description=p@chr5:142193841..142193874,+ | ||
}} | }} |
Latest revision as of 10:52, 30 July 2015
Short description: | p@chr5:142193841..142193874, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:142193841..142193874, + |
Coexpression cluster: | C623_Dendritic_Neutrophils_Eosinophils_Whole_Macrophage_CD14_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.17e-26 | 72 |
granulocyte | 1.85e-26 | 8 |
adult endothelial progenitor cell | 2.07e-26 | 3 |
neutrophil | 3.17e-26 | 3 |
macrophage | 5.26e-22 | 6 |
blood cell | 3.16e-19 | 11 |
eosinophil | 6.27e-18 | 2 |
myeloid cell | 6.23e-17 | 108 |
common myeloid progenitor | 6.23e-17 | 108 |
monopoietic cell | 4.50e-15 | 59 |
monocyte | 4.50e-15 | 59 |
monoblast | 4.50e-15 | 59 |
promonocyte | 4.50e-15 | 59 |
macrophage dendritic cell progenitor | 1.58e-14 | 61 |
immature conventional dendritic cell | 1.45e-13 | 5 |
common dendritic progenitor | 1.45e-13 | 5 |
myeloid lineage restricted progenitor cell | 2.61e-13 | 66 |
granulocyte monocyte progenitor cell | 4.35e-13 | 67 |
leukocyte | 6.82e-13 | 136 |
hematopoietic oligopotent progenitor cell | 1.84e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-10 | 161 |
hematopoietic stem cell | 6.54e-10 | 168 |
hematopoietic cell | 2.89e-09 | 177 |
conventional dendritic cell | 3.27e-09 | 8 |
dendritic cell | 1.28e-07 | 10 |
nongranular leukocyte | 6.30e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 7.28e-34 | 15 |
haemolymphatic fluid | 7.28e-34 | 15 |
organism substance | 7.28e-34 | 15 |
hematopoietic system | 5.06e-27 | 98 |
blood island | 5.06e-27 | 98 |
hemolymphoid system | 2.97e-24 | 108 |
lateral plate mesoderm | 1.91e-11 | 203 |
bone marrow | 2.40e-11 | 76 |
bone element | 2.14e-10 | 82 |
skeletal element | 2.53e-09 | 90 |
immune system | 5.73e-09 | 93 |
skeletal system | 3.20e-08 | 100 |