FFCP PHASE1:Hg19::chr5:137802785..137802802,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:137802785..137802802,+
|short_description=p@chr5:137802785..137802802,+
|description=CAGE_peak_at_chr5:137802785..137802802,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:137802785..137802802,+ | |||
|description=CAGE_peak_at_chr5:137802785..137802802,+ | |||
|id=chr5:137802785..137802802,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.96e-08;3!CL:0000322;2.36e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.58e-08,3;CL:0000322,2.55e-08,3;CL:0000167,9.79e-07,1;CL:0000164,9.79e-07,1;CL:0000502,9.79e-07,1;CL:0000172,9.79e-07,1;CL:0000173,9.79e-07,1;CL:0002351,9.79e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.42e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!9.61e-08!143;DOID:305!1.28e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3307;3.15e-12;2!DOID:3910;4.17e-12;2!DOID:3908;1.84e-10;5!DOID:3905;6.80e-10;9!DOID:1325;1.34e-07;7!DOID:3904;1.34e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.71e-12,2;DOID:3910,4.68e-12,2;DOID:3908,1.73e-10,5;DOID:3905,7.67e-10,9;DOID:1325,1.65e-07,7;DOID:3904,1.65e-07,7;DOID:4430,9.79e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.17e-12;2!UBERON:0002173;4.17e-12;2!UBERON:0002186;4.17e-12;2!UBERON:0003124;1.96e-08;3!UBERON:0000920;1.96e-08;3!UBERON:0004821;2.36e-08;3!UBERON:0007499;2.36e-08;3!UBERON:0003215;2.36e-08;3!UBERON:0010368;2.36e-08;3!UBERON:0009911;2.36e-08;3!UBERON:0002299;2.36e-08;3!UBERON:0006524;2.36e-08;3!UBERON:0008874;2.36e-08;3!UBERON:0002169;2.36e-08;3!UBERON:0004894;2.36e-08;3!UBERON:0002426;3.71e-07;1!UBERON:0003831;3.71e-07;1!UBERON:0003898;3.71e-07;1!UBERON:0004830;3.71e-07;1!UBERON:0003830;3.71e-07;1!UBERON:0005175;3.71e-07;1!UBERON:0001774;3.71e-07;1!UBERON:0001103;3.71e-07;1!UBERON:0000998;4.42e-07;1!UBERON:0006868;4.42e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.68e-12,2;UBERON:0002173,4.68e-12,2;UBERON:0002186,4.68e-12,2;UBERON:0000920,1.58e-08,3;UBERON:0004821,2.55e-08,3;UBERON:0003215,2.55e-08,3;UBERON:0010368,2.55e-08,3;UBERON:0009911,2.55e-08,3;UBERON:0002299,2.55e-08,3;UBERON:0006524,2.55e-08,3;UBERON:0008874,2.55e-08,3;UBERON:0002169,2.55e-08,3;UBERON:0004894,2.55e-08,3;UBERON:0002426,3.73e-07,1;UBERON:0003831,3.73e-07,1;UBERON:0003898,3.73e-07,1;UBERON:0004830,3.73e-07,1;UBERON:0003830,3.73e-07,1;UBERON:0005175,3.73e-07,1;UBERON:0001774,3.73e-07,1;UBERON:0001103,3.73e-07,1;UBERON:0010084,3.73e-07,1;UBERON:0000998,4.97e-07,1;UBERON:0006868,4.97e-07,1 | |||
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| ||
|short_description=p@chr5:137802785..137802802,+ | |||
}} | }} |
Latest revision as of 10:15, 30 July 2015
Short description: | p@chr5:137802785..137802802, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:137802785..137802802, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.58e-08 | 3 |
pneumocyte | 2.55e-08 | 3 |
peptide hormone secreting cell | 9.79e-07 | 1 |
enteroendocrine cell | 9.79e-07 | 1 |
type D enteroendocrine cell | 9.79e-07 | 1 |
somatostatin secreting cell | 9.79e-07 | 1 |
pancreatic D cell | 9.79e-07 | 1 |
progenitor cell of endocrine pancreas | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.68e-12 | 2 |
alveolar duct | 4.68e-12 | 2 |
bronchiole | 4.68e-12 | 2 |
egg chorion | 1.58e-08 | 3 |
pulmonary alveolus epithelium | 2.55e-08 | 3 |
alveolus | 2.55e-08 | 3 |
pulmonary lobule | 2.55e-08 | 3 |
lobule | 2.55e-08 | 3 |
alveolus of lung | 2.55e-08 | 3 |
alveolar system | 2.55e-08 | 3 |
pulmonary acinus | 2.55e-08 | 3 |
alveolar sac | 2.55e-08 | 3 |
alveolar wall | 2.55e-08 | 3 |
chest muscle | 3.73e-07 | 1 |
respiratory system muscle | 3.73e-07 | 1 |
skeletal muscle of trunk | 3.73e-07 | 1 |
respiratory system skeletal muscle | 3.73e-07 | 1 |
thoracic segment muscle | 3.73e-07 | 1 |
chest organ | 3.73e-07 | 1 |
muscle of trunk | 3.73e-07 | 1 |
diaphragm | 3.73e-07 | 1 |
future diaphragm | 3.73e-07 | 1 |
seminal vesicle | 4.97e-07 | 1 |
seminal fluid secreting gland | 4.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.71e-12 | 2 |
lung adenocarcinoma | 4.68e-12 | 2 |
non-small cell lung carcinoma | 1.73e-10 | 5 |
lung carcinoma | 7.67e-10 | 9 |
bronchus cancer | 1.65e-07 | 7 |
bronchogenic carcinoma | 1.65e-07 | 7 |
somatostatinoma | 9.79e-07 | 1 |