FFCP PHASE1:Hg19::chr5:134906663..134906677,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:134906663..134906677,- | |||
|coexpression_cluster_id=C607 | |coexpression_cluster_id=C607 | ||
|description=CAGE_peak_at_chr5:134906663..134906677,- | |description=CAGE_peak_at_chr5:134906663..134906677,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000312;3.10e-11;5!CL:0000240;1.38e-09;6!CL:0000311;1.38e-09;6!CL:0000079;1.38e-09;6!CL:0000237;1.38e-09;6!CL:0000362;8.14e-07;9 | |ontology_enrichment_celltype_v019=CL:0000312;3.10e-11;5!CL:0000240;1.38e-09;6!CL:0000311;1.38e-09;6!CL:0000079;1.38e-09;6!CL:0000237;1.38e-09;6!CL:0000362;8.14e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000312,3.26e-11,5;CL:0000240,1.44e-09,6;CL:0000311,1.44e-09,6;CL:0000079,1.44e-09,6;CL:0000237,1.44e-09,6;CL:0000036,1.44e-09,6;CL:0000357,1.44e-09,6;CL:0000114,1.44e-09,6;CL:0000362,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.38e-09;6!CL:0000114;1.38e-09;6 | |ontology_enrichment_development_v019=CL:0000357;1.38e-09;6!CL:0000114;1.38e-09;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;8.82e-14;4!DOID:4362;3.10e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |ontology_enrichment_disease_v019=DOID:5409;8.82e-14;4!DOID:4362;3.10e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:4362,2.94e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007029;6.58e-50;1!UBERON:0001003;3.25e-14;15!UBERON:0007376;3.25e-14;15!UBERON:0000014;1.29e-13;4!UBERON:0000002;1.38e-09;6!UBERON:0001560;1.38e-09;6!UBERON:0010371;1.23e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0007029;6.58e-50;1!UBERON:0001003;3.25e-14;15!UBERON:0007376;3.25e-14;15!UBERON:0000014;1.29e-13;4!UBERON:0000002;1.38e-09;6!UBERON:0001560;1.38e-09;6!UBERON:0010371;1.23e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,6.58e-50,1;UBERON:0001003,3.36e-14,15;UBERON:0007376,3.36e-14,15;UBERON:0007383,3.36e-14,15;UBERON:0000014,1.29e-13,4;UBERON:0000002,1.32e-09,6;UBERON:0001560,1.32e-09,6 | |||
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| ||
|short_description=p@chr5:134906663..134906677,- | |short_description=p@chr5:134906663..134906677,- | ||
}} | }} |
Latest revision as of 09:58, 30 July 2015
Short description: | p@chr5:134906663..134906677, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134906663..134906677, - |
Coexpression cluster: | C607_small_cervical_Keratinocyte_Sebocyte_maxillary_normal_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 3.26e-11 | 5 |
stratified squamous epithelial cell | 1.44e-09 | 6 |
keratin accumulating cell | 1.44e-09 | 6 |
stratified epithelial cell | 1.44e-09 | 6 |
keratinizing barrier epithelial cell | 1.44e-09 | 6 |
epithelial fate stem cell | 1.44e-09 | 6 |
stratified epithelial stem cell | 1.44e-09 | 6 |
surface ectodermal cell | 1.44e-09 | 6 |
epidermal cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
surface | 6.58e-50 | 1 |
skin epidermis | 3.36e-14 | 15 |
outer epithelium | 3.36e-14 | 15 |
enveloping layer of ectoderm | 3.36e-14 | 15 |
zone of skin | 1.29e-13 | 4 |
uterine cervix | 1.32e-09 | 6 |
neck of organ | 1.32e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
cervical cancer | 2.94e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |