FFCP PHASE1:Hg19::chr5:128776302..128776327,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:128776302..128776327,- | |||
|coexpression_cluster_id=C1491 | |||
|description=CAGE_peak_at_chr5:128776302..128776327,- | |description=CAGE_peak_at_chr5:128776302..128776327,- | ||
|id=chr5:128776302..128776327,- | |id=chr5:128776302..128776327,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;3.75e-18;1!UBERON:0006298;4.44e-18;1!UBERON:0001045;1.22e-17;1!UBERON:0006965;1.71e-09;2 | |||
|ontology_enrichment_disease=DOID:3493!2.08e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!2.96e-11!35;UBERON:0001829!2.98e-11!2;UBERON:0003127!5.13e-11!2;UBERON:0007023!1.38e-10!115;UBERON:0004921!5.58e-10!129;UBERON:0004185!5.58e-10!129;UBERON:0000160!1.23e-09!27;UBERON:0001007!1.27e-09!155;UBERON:0001555!1.27e-09!155;UBERON:0007026!1.27e-09!155;UBERON:0004119!1.95e-08!169;UBERON:0000925!1.95e-08!169;UBERON:0006595!1.95e-08!169;UBERON:0001044!3.06e-08!6;UBERON:0003293!3.06e-08!6;UBERON:0003294!3.06e-08!6;UBERON:0010047!3.06e-08!6;UBERON:0000167!3.06e-08!6;UBERON:0003408!4.85e-08!10;UBERON:0002110!3.49e-07!3;UBERON:0006242!3.49e-07!3;UBERON:0002771!5.55e-07!3;UBERON:0000077!9.08e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.18e-34;2!UBERON:0001044;7.84e-26;6!UBERON:0003293;7.84e-26;6!UBERON:0003294;7.84e-26;6!UBERON:0010047;7.84e-26;6!UBERON:0003408;7.84e-26;6!UBERON:0000167;7.84e-26;6!UBERON:0001831;3.75e-18;1!UBERON:0001567;3.75e-18;1!UBERON:0001736;4.44e-18;1!UBERON:0001154;1.22e-17;1!UBERON:0001153;1.22e-17;1!UBERON:0009854;1.22e-17;1!UBERON:0001041;1.84e-11;14!UBERON:0004089;9.46e-10;2!UBERON:0003127;1.12e-09;2!UBERON:0000341;1.27e-09;2!UBERON:0000161;1.35e-08;19!UBERON:0000166;1.35e-08;19!UBERON:0004921;2.07e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.18e-34,2;UBERON:0001044,7.84e-26,6;UBERON:0003293,7.84e-26,6;UBERON:0003294,7.84e-26,6;UBERON:0010047,7.84e-26,6;UBERON:0000167,7.84e-26,6;UBERON:0001831,3.75e-18,1;UBERON:0001567,3.75e-18,1;UBERON:0008801,3.75e-18,1;UBERON:0001736,4.44e-18,1;UBERON:0006298,4.44e-18,1;UBERON:0001154,1.70e-17,1;UBERON:0001153,1.70e-17,1;UBERON:0001045,1.70e-17,1;UBERON:0003408,8.65e-16,10;UBERON:0004089,9.46e-10,2;UBERON:0003127,1.12e-09,2;UBERON:0000341,1.22e-09,2;UBERON:0007023,9.02e-09,114;UBERON:0000166,1.70e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16200800870452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,1.10513566212459,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,2.33283690706603,0.520874984799877,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2857381909626,0,0,0,0,0,0,0,0,6.030835435429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,15.0579575587097,0,0,0,0,0,0,0,0.098150233615243,1.34109717480496,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,4.12856355064087,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,0,0,0.0620747142958579,0,0,0,0,0,0.26940821205835,3.65783247502649,0.99798106963804,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16200800870452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,1.10513566212459,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,2.33283690706603,0.520874984799877,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2857381909626,0,0,0,0,0,0,0,0,6.030835435429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,15.0579575587097,0,0,0,0,0,0,0,0.098150233615243,1.34109717480496,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,4.12856355064087,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77204176471275,0,0,0.0620747142958579,0,0,0,0,0,0.26940821205835,3.65783247502649,0.99798106963804,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr5:128776302..128776327,- | |short_description=p@chr5:128776302..128776327,- | ||
}} | }} |
Latest revision as of 09:24, 30 July 2015
Short description: | p@chr5:128776302..128776327, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:128776302..128776327, - |
Coexpression cluster: | C1491_parotid_pancreas_salivary_submaxillary_smallcell_myeloma_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.18e-34 | 2 |
saliva-secreting gland | 7.84e-26 | 6 |
gland of oral region | 7.84e-26 | 6 |
gland of foregut | 7.84e-26 | 6 |
oral gland | 7.84e-26 | 6 |
oral cavity | 7.84e-26 | 6 |
parotid gland | 3.75e-18 | 1 |
cheek | 3.75e-18 | 1 |
parotid gland primordium | 3.75e-18 | 1 |
submandibular gland | 4.44e-18 | 1 |
submandibular gland primordium | 4.44e-18 | 1 |
vermiform appendix | 1.70e-17 | 1 |
caecum | 1.70e-17 | 1 |
midgut | 1.70e-17 | 1 |
gland of gut | 8.65e-16 | 10 |
midface | 9.46e-10 | 2 |
open tracheal system trachea | 1.12e-09 | 2 |
throat | 1.22e-09 | 2 |
adult organism | 9.02e-09 | 114 |
oral opening | 1.70e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.44e-09 | 2 |