FFCP PHASE1:Hg19::chr5:125758813..125758845,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=65983 | |EntrezGene=entrezgene:65983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=24911 | |HGNC=HGNC:24911 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q96HH9,E9PD09 | |UniProt=uniprot:Q96HH9,uniprot:E9PD09 | ||
|association_with_transcript=0bp_to_ENST00000285689,ENST00000515200_5end | |association_with_transcript=0bp_to_ENST00000285689,ENST00000515200_5end | ||
|cluster_id=chr5:125758813..125758845,+ | |||
|description=CAGE_peak_3_at_GRAMD3_5end | |description=CAGE_peak_3_at_GRAMD3_5end | ||
|id=chr5:125758813..125758845,+ | |id=chr5:125758813..125758845,+ | ||
Revision as of 09:15, 30 July 2015
| Short description: | p3@GRAMD3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_GRAMD3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000285689, ENST00000515200_5end |
| EntrezGene: | 65983 |
| HGNC: | 24911 |
| UniProt: | Q96HH9E9PD09 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@GRAMD3 |
|---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 9.09e-15 | 56 |
| neural rod | 9.09e-15 | 56 |
| future spinal cord | 9.09e-15 | 56 |
| neural keel | 9.09e-15 | 56 |
| regional part of nervous system | 1.39e-13 | 53 |
| regional part of brain | 1.39e-13 | 53 |
| adult organism | 2.79e-12 | 114 |
| regional part of forebrain | 5.07e-12 | 41 |
| forebrain | 5.07e-12 | 41 |
| anterior neural tube | 5.07e-12 | 41 |
Showing 1 to 10 of 28 entries
